RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W SFA1P32771 386 aa2.38□□□□□ -2.03
NUP170YBL079W SAP190P36123 1033 aa2.38□□□□□ -2.03
NUP170YBL079W VBA5P36172 582 aa2.38□□□□□ -2.03
NUP170YBL079W DPH1P40487 425 aaKnown RBP2.38□□□□□ -2.03
NUP170YBL079W DRN1P53255 507 aaKnown RBP2.38□□□□□ -2.03
NUP170YBL079W HST1P53685 503 aa2.38□□□□□ -2.03
NUP170YBL079W SWS2P53937 143 aa2.38□□□□□ -2.03
NUP170YBL079W AIM39Q08223 395 aa2.38□□□□□ -2.03
NUP170YBL079W ABP140Q08641 628 aaKnown RBP2.38□□□□□ -2.03
NUP170YBL079W GPN2Q08726 347 aaPredicted RBP2.38□□□□□ -2.03
NUP170YBL079W SPO21Q12411 609 aa2.38□□□□□ -2.03
NUP170YBL079W PGA3Q12746 312 aaKnown RBP2.38□□□□□ -2.03
NUP170YBL079W YDR034W-BQ6Q5X2 51 aa2.38□□□□□ -2.03
NUP170YBL079W TY4B-PA0A0B7P3V8 1104 aa2.38□□□□□ -2.03
NUP170YBL079W ADE3P07245 946 aaKnown RBP2.38□□□□□ -2.03
NUP170YBL079W MCM2P29469 868 aa2.38□□□□□ -2.03
NUP170YBL079W YSW1P38280 609 aa2.38□□□□□ -2.03
NUP170YBL079W FRT2P39734 528 aa2.38□□□□□ -2.03
NUP170YBL079W AVT2P39981 480 aa2.38□□□□□ -2.03
NUP170YBL079W MND2P40577 368 aa2.38□□□□□ -2.03
NUP170YBL079W STU2P46675 888 aa2.38□□□□□ -2.03
NUP170YBL079W GCN5Q03330 439 aa2.38□□□□□ -2.03
NUP170YBL079W HER2Q03557 464 aa2.38□□□□□ -2.03
NUP170YBL079W YMR206WQ03695 313 aa2.38□□□□□ -2.03
NUP170YBL079W YOR012WQ12351 137 aa2.38□□□□□ -2.03
NUP170YBL079W INH1P01097 85 aa2.38□□□□□ -2.03
NUP170YBL079W SIR1P21691 654 aa2.38□□□□□ -2.03
NUP170YBL079W GID7P25569 745 aa2.38□□□□□ -2.03
NUP170YBL079W CIN8P27895 1000 aa2.38□□□□□ -2.03
NUP170YBL079W MCM5P29496 775 aaKnown RBP2.38□□□□□ -2.03
NUP170YBL079W SAC6P32599 642 aaKnown RBP2.38□□□□□ -2.03
NUP170YBL079W ATO2P32907 282 aa2.38□□□□□ -2.03
NUP170YBL079W SWE1P32944 819 aa2.38□□□□□ -2.03
NUP170YBL079W YBP1P38315 674 aa2.38□□□□□ -2.03
NUP170YBL079W YHR112CP38716 378 aa2.38□□□□□ -2.03
NUP170YBL079W DUN1P39009 513 aa2.38□□□□□ -2.03
NUP170YBL079W PRM1P53835 661 aa2.38□□□□□ -2.03
NUP170YBL079W TRM82Q03774 444 aa2.38□□□□□ -2.03
NUP170YBL079W YMR160WQ03823 816 aa2.38□□□□□ -2.03
NUP170YBL079W RGA2Q06407 1009 aa2.38□□□□□ -2.03
NUP170YBL079W TRE2Q08693 809 aa2.38□□□□□ -2.03
NUP170YBL079W CDC36P06100 191 aaPredicted RBP2.37□□□□□ -2.03
NUP170YBL079W CDC6P09119 513 aa2.37□□□□□ -2.03
NUP170YBL079W NAR1P23503 491 aaKnown RBP2.37□□□□□ -2.03
NUP170YBL079W PDR3P33200 976 aa2.37□□□□□ -2.03
NUP170YBL079W TGL4P36165 910 aa2.37□□□□□ -2.03
NUP170YBL079W DYS1P38791 387 aa2.37□□□□□ -2.03
NUP170YBL079W DLD2P46681 530 aaKnown RBP2.37□□□□□ -2.03
NUP170YBL079W ZAP1P47043 880 aa2.37□□□□□ -2.03
NUP170YBL079W NOP15P53927 220 aaPredicted RBP2.37□□□□□ -2.03
NUP170YBL079W ENT2Q05785 613 aa2.37□□□□□ -2.03
NUP170YBL079W HBT1Q07653 1046 aaKnown RBP2.37□□□□□ -2.03
NUP170YBL079W PRT1P06103 763 aaKnown RBP2.37□□□□□ -2.03
NUP170YBL079W MSF1P08425 469 aa2.37□□□□□ -2.03
NUP170YBL079W CIT2P08679 460 aa2.37□□□□□ -2.03
NUP170YBL079W RNA1P11745 407 aaKnown RBP2.37□□□□□ -2.03
NUP170YBL079W NDI1P32340 513 aa2.37□□□□□ -2.03
NUP170YBL079W DAL1P32375 460 aa2.37□□□□□ -2.03
NUP170YBL079W NAB2P32505 525 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
NUP170YBL079W NIP100P33420 868 aa2.37□□□□□ -2.03
NUP170YBL079W PHO11P35842 467 aa2.37□□□□□ -2.03
NUP170YBL079W PIM1P36775 1133 aa2.37□□□□□ -2.03
NUP170YBL079W PHO12P38693 467 aa2.37□□□□□ -2.03
NUP170YBL079W YEL020CP39994 560 aa2.37□□□□□ -2.03
NUP170YBL079W YER034WP40022 185 aaKnown RBP2.37□□□□□ -2.03
NUP170YBL079W KHA1P40309 873 aa2.37□□□□□ -2.03
NUP170YBL079W HOC1P47124 396 aa2.37□□□□□ -2.03
NUP170YBL079W RPL22BP56628 122 aaKnown RBP2.37□□□□□ -2.03
NUP170YBL079W RHO3Q00245 231 aaKnown RBP2.37□□□□□ -2.03
NUP170YBL079W INP2Q03824 705 aa2.37□□□□□ -2.03
NUP170YBL079W CIA1Q05583 330 aa2.37□□□□□ -2.03
NUP170YBL079W TMA16Q08687 178 aa2.37□□□□□ -2.03
NUP170YBL079W RTT10Q08924 1013 aa2.37□□□□□ -2.03
NUP170YBL079W YPQ1Q12010 308 aa2.37□□□□□ -2.03
NUP170YBL079W ATG9Q12142 997 aa2.37□□□□□ -2.03
NUP170YBL079W CMR1Q12510 522 aaKnown RBP2.37□□□□□ -2.03
NUP170YBL079W ADE4P04046 510 aaKnown RBP2.37□□□□□ -2.03
NUP170YBL079W PRP9P19736 530 aaKnown RBP2.37□□□□□ -2.03
NUP170YBL079W SAT4P25333 603 aaKnown RBP2.37□□□□□ -2.03
NUP170YBL079W RPF2P36160 344 aaKnown RBP2.37□□□□□ -2.03
NUP170YBL079W PPE1P38796 400 aa2.37□□□□□ -2.03
NUP170YBL079W TMA108P40462 946 aa2.37□□□□□ -2.03
NUP170YBL079W YPT11P48559 417 aa2.37□□□□□ -2.03
NUP170YBL079W CTF18P49956 741 aa2.37□□□□□ -2.03
NUP170YBL079W ORC5P50874 479 aa2.37□□□□□ -2.03
NUP170YBL079W NAM8Q00539 523 aaKnown RBP2.37□□□□□ -2.03
NUP170YBL079W TBF1Q02457 562 aa2.37□□□□□ -2.03
NUP170YBL079W SYH1Q02875 849 aaKnown RBP2.37□□□□□ -2.03
NUP170YBL079W RKM2Q03942 479 aa2.37□□□□□ -2.03
NUP170YBL079W MCP2Q06567 569 aa2.37□□□□□ -2.03
NUP170YBL079W HDA3Q06623 655 aa2.37□□□□□ -2.03
NUP170YBL079W BUD7Q08754 746 aa2.37□□□□□ -2.03
NUP170YBL079W AI5_BETAQ9ZZX0 354 aa2.37□□□□□ -2.03
NUP170YBL079W GAL4P04386 881 aa2.36□□□□□ -2.03
NUP170YBL079W SCH9P11792 824 aaKnown RBP2.36□□□□□ -2.03
NUP170YBL079W HSP60P19882 572 aaKnown RBP2.36□□□□□ -2.03
NUP170YBL079W PEX1P24004 1043 aa2.36□□□□□ -2.03
NUP170YBL079W PEP7P32609 515 aa2.36□□□□□ -2.03
NUP170YBL079W ELM1P32801 640 aa2.36□□□□□ -2.03
NUP170YBL079W VPS24P36095 224 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms