RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 PRRT2Q7Z6L0 340 aaPredicted RBP18.34■□□□□ 0.53
PNKP-218ENST00000625299 SLC17A8Q8NDX2 589 aa18.34■□□□□ 0.53
PNKP-218ENST00000625299 DEFB118Q96PH6 123 aa18.34■□□□□ 0.53
PNKP-218ENST00000625299 SIL1Q9H173 461 aa18.34■□□□□ 0.53
PNKP-218ENST00000625299 GNL3LQ9NVN8 582 aaKnown RBP18.34■□□□□ 0.53
PNKP-218ENST00000625299 PTPRFP10586 1907 aa18.33■□□□□ 0.53
PNKP-218ENST00000625299 PTPRCP08575 1304 aa18.33■□□□□ 0.53
PNKP-218ENST00000625299 PTPRAP18433 802 aa18.33■□□□□ 0.52
PNKP-218ENST00000625299 RFX5P48382 616 aaPredicted RBP18.33■□□□□ 0.52
PNKP-218ENST00000625299 ATP2B3Q16720 1220 aa18.33■□□□□ 0.52
PNKP-218ENST00000625299 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.52
PNKP-218ENST00000625299 USP44Q9H0E7 712 aa18.33■□□□□ 0.52
PNKP-218ENST00000625299 LRRFIP2Q9Y608 721 aaKnown RBP18.33■□□□□ 0.52
PNKP-218ENST00000625299 DOCK1Q14185 1865 aa18.33■□□□□ 0.52
PNKP-218ENST00000625299 ATRNL1Q5VV63 1379 aa18.32■□□□□ 0.52
PNKP-218ENST00000625299 TRIM75PA6NK02 468 aa18.32■□□□□ 0.52
PNKP-218ENST00000625299 PHF20L1A8MW92 1017 aa18.32■□□□□ 0.52
PNKP-218ENST00000625299 DLL1O00548 723 aa18.32■□□□□ 0.52
PNKP-218ENST00000625299 SLURP2P0DP57 97 aa18.32■□□□□ 0.52
PNKP-218ENST00000625299 LAMA3Q16787 3333 aa18.31■□□□□ 0.52
PNKP-218ENST00000625299 SOX1O00570 391 aaPredicted RBP18.31■□□□□ 0.52
PNKP-218ENST00000625299 ANP32CO43423 234 aa18.31■□□□□ 0.52
PNKP-218ENST00000625299 ATG9AQ7Z3C6 839 aa18.31■□□□□ 0.52
PNKP-218ENST00000625299 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.31■□□□□ 0.52
PNKP-218ENST00000625299 STAP2Q9UGK3 403 aa18.31■□□□□ 0.52
PNKP-218ENST00000625299 AFG3L2Q9Y4W6 797 aa18.31■□□□□ 0.52
PNKP-218ENST00000625299 PHIPQ8WWQ0 1821 aa18.3■□□□□ 0.52
PNKP-218ENST00000625299 ALPK3Q96L96 1907 aa18.3■□□□□ 0.52
PNKP-218ENST00000625299 PHKA1P46020 1223 aa18.3■□□□□ 0.52
PNKP-218ENST00000625299 PICALMQ13492 652 aa18.3■□□□□ 0.52
PNKP-218ENST00000625299 CCDC84Q86UT8 332 aaPredicted RBP18.3■□□□□ 0.52
PNKP-218ENST00000625299 DZIP1Q86YF9 867 aaKnown RBP18.3■□□□□ 0.52
PNKP-218ENST00000625299 ANKRD13CQ8N6S4 541 aa18.3■□□□□ 0.52
PNKP-218ENST00000625299 PXYLP1Q8TE99 480 aa18.3■□□□□ 0.52
PNKP-218ENST00000625299 LRCH3Q96II8 777 aa18.3■□□□□ 0.52
PNKP-218ENST00000625299 CEP126Q9P2H0 1117 aa18.3■□□□□ 0.52
PNKP-218ENST00000625299 DENND2AQ9ULE3 1009 aa18.3■□□□□ 0.52
PNKP-218ENST00000625299 DOCK3Q8IZD9 2030 aa18.3■□□□□ 0.52
PNKP-218ENST00000625299 SALL1Q9NSC2 1324 aa18.29■□□□□ 0.52
PNKP-218ENST00000625299 A0A1W2PPC1 479 aa18.29■□□□□ 0.52
PNKP-218ENST00000625299 ENTPD3O75355 529 aa18.29■□□□□ 0.52
PNKP-218ENST00000625299 SH3BP5LQ7L8J4 393 aa18.29■□□□□ 0.52
PNKP-218ENST00000625299 COA7Q96BR5 231 aa18.29■□□□□ 0.52
PNKP-218ENST00000625299 PAWRQ96IZ0 340 aaKnown RBP18.29■□□□□ 0.52
PNKP-218ENST00000625299 IDI2Q9BXS1 227 aa18.29■□□□□ 0.52
PNKP-218ENST00000625299 SLC45A1Q9Y2W3 748 aa18.29■□□□□ 0.52
PNKP-218ENST00000625299 COL6A3P12111 3177 aa18.28■□□□□ 0.52
PNKP-218ENST00000625299 DDTLA6NHG4 134 aaPredicted RBP18.28■□□□□ 0.52
PNKP-218ENST00000625299 IRF5Q13568 498 aa18.28■□□□□ 0.52
PNKP-218ENST00000625299 DIS3LQ8TF46 1054 aaKnown RBP18.28■□□□□ 0.52
PNKP-218ENST00000625299 SSH1Q8WYL5 1049 aa18.28■□□□□ 0.52
PNKP-218ENST00000625299 PAK6Q9NQU5 681 aaPredicted RBP18.28■□□□□ 0.52
PNKP-218ENST00000625299 ABCF2Q9UG63 623 aa18.28■□□□□ 0.52
PNKP-218ENST00000625299 RFX7Q2KHR2 1363 aa18.28■□□□□ 0.52
PNKP-218ENST00000625299 SEMA3EO15041 775 aa18.27■□□□□ 0.52
PNKP-218ENST00000625299 CTNND1O60716 968 aaKnown RBP18.27■□□□□ 0.52
PNKP-218ENST00000625299 ADORA1P30542 326 aa18.27■□□□□ 0.52
PNKP-218ENST00000625299 BTDP43251 543 aa18.27■□□□□ 0.52
PNKP-218ENST00000625299 TREML2Q5T2D2 321 aa18.27■□□□□ 0.52
PNKP-218ENST00000625299 C7orf61Q8IZ16 206 aa18.27■□□□□ 0.52
PNKP-218ENST00000625299 ZGPATQ8N5A5 531 aaKnown RBP18.27■□□□□ 0.52
PNKP-218ENST00000625299 DDX4Q9NQI0 724 aaKnown RBP18.27■□□□□ 0.52
PNKP-218ENST00000625299 AGTPBP1Q9UPW5 1226 aa18.27■□□□□ 0.52
PNKP-218ENST00000625299 GAKO14976 1311 aa18.26■□□□□ 0.51
PNKP-218ENST00000625299 CIAO1O76071 339 aa18.26■□□□□ 0.51
PNKP-218ENST00000625299 UBTFL1P0CB47 393 aaPredicted RBP18.26■□□□□ 0.51
PNKP-218ENST00000625299 NECAB2Q7Z6G3 386 aa18.26■□□□□ 0.51
PNKP-218ENST00000625299 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.26■□□□□ 0.51
PNKP-218ENST00000625299 PNMA3Q9UL41 463 aa18.26■□□□□ 0.51
PNKP-218ENST00000625299 FAM196BA6NMK8 535 aa18.25■□□□□ 0.51
PNKP-218ENST00000625299 CCDC102BQ68D86 513 aa18.25■□□□□ 0.51
PNKP-218ENST00000625299 SLF2Q8IX21 1173 aa18.25■□□□□ 0.51
PNKP-218ENST00000625299 CRISPLD2Q9H0B8 497 aa18.25■□□□□ 0.51
PNKP-218ENST00000625299 ZMYND8Q9ULU4 1186 aaPredicted RBP18.25■□□□□ 0.51
PNKP-218ENST00000625299 PA2G4Q9UQ80 394 aaKnown RBP18.25■□□□□ 0.51
PNKP-218ENST00000625299 CAPN2P17655 700 aa18.24■□□□□ 0.51
PNKP-218ENST00000625299 IL15P40933 162 aaPredicted RBP18.24■□□□□ 0.51
PNKP-218ENST00000625299 RASGRF1Q13972 1273 aa18.24■□□□□ 0.51
PNKP-218ENST00000625299 FAM110CQ1W6H9 321 aa18.24■□□□□ 0.51
PNKP-218ENST00000625299 FBXO3Q9UK99 471 aa18.24■□□□□ 0.51
PNKP-218ENST00000625299 ATAD5Q96QE3 1844 aa18.23■□□□□ 0.51
PNKP-218ENST00000625299 MAP3K10Q02779 954 aa18.23■□□□□ 0.51
PNKP-218ENST00000625299 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.23■□□□□ 0.51
PNKP-218ENST00000625299 MROH7-TTC4A0A0A0MT08 1334 aa18.23■□□□□ 0.51
PNKP-218ENST00000625299 ZNF521Q96K83 1311 aa18.23■□□□□ 0.51
PNKP-218ENST00000625299 LOC285556D6RIA3 1793 aa18.22■□□□□ 0.51
PNKP-218ENST00000625299 HMGCRP04035 888 aa18.22■□□□□ 0.51
PNKP-218ENST00000625299 SPP2Q13103 211 aa18.22■□□□□ 0.51
PNKP-218ENST00000625299 SPTY2D1Q68D10 685 aaPredicted RBP18.22■□□□□ 0.51
PNKP-218ENST00000625299 SMC4Q9NTJ3 1288 aa18.22■□□□□ 0.51
PNKP-218ENST00000625299 DDX60LQ5H9U9 1706 aaKnown RBP18.22■□□□□ 0.51
PNKP-218ENST00000625299 SYN1P17600 705 aa18.21■□□□□ 0.51
PNKP-218ENST00000625299 HMGCS2P54868 508 aa18.21■□□□□ 0.51
PNKP-218ENST00000625299 TIMM10P62072 90 aa18.21■□□□□ 0.51
PNKP-218ENST00000625299 TRIM32Q13049 653 aa18.21■□□□□ 0.51
PNKP-218ENST00000625299 PROCA1Q8NCQ7 364 aaPredicted RBP18.21■□□□□ 0.51
PNKP-218ENST00000625299 HMX1Q9NP08 348 aaPredicted RBP18.21■□□□□ 0.51
PNKP-218ENST00000625299 GCLCP48506 637 aaPredicted RBP18.2■□□□□ 0.5
PNKP-218ENST00000625299 MECOMQ03112 1051 aa18.2■□□□□ 0.5
PNKP-218ENST00000625299 PABPC4Q13310 644 aaKnown RBP eCLIP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms