RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 KIAA0825Q8IV33 1275 aa6.11□□□□□ -1.43
ATRX-209ENST00000623242 GOLM1Q8NBJ4 401 aa6.11□□□□□ -1.43
ATRX-209ENST00000623242 CORO1BQ9BR76 489 aa6.11□□□□□ -1.43
ATRX-209ENST00000623242 UBP1Q9NZI7 540 aa6.11□□□□□ -1.43
ATRX-209ENST00000623242 INPP5FQ9Y2H2 1132 aa6.11□□□□□ -1.43
ATRX-209ENST00000623242 RUSC2Q8N2Y8 1516 aa6.1□□□□□ -1.43
ATRX-209ENST00000623242 GRIN2BQ13224 1484 aa6.1□□□□□ -1.43
ATRX-209ENST00000623242 LIG1P18858 919 aa6.1□□□□□ -1.43
ATRX-209ENST00000623242 TRIM28Q13263 835 aaKnown RBP6.1□□□□□ -1.43
ATRX-209ENST00000623242 GRIK4Q16099 956 aa6.1□□□□□ -1.43
ATRX-209ENST00000623242 SNAP47Q5SQN1 464 aa6.1□□□□□ -1.43
ATRX-209ENST00000623242 FAM196AQ6ZSG2 479 aa6.1□□□□□ -1.43
ATRX-209ENST00000623242 CCDC84Q86UT8 332 aaPredicted RBP6.1□□□□□ -1.43
ATRX-209ENST00000623242 JARID2Q92833 1246 aaPredicted RBP6.1□□□□□ -1.43
ATRX-209ENST00000623242 NT5C1AQ9BXI3 368 aa6.1□□□□□ -1.43
ATRX-209ENST00000623242 MIR1-1HGQ9H1L0 117 aa6.1□□□□□ -1.43
ATRX-209ENST00000623242 KRT82Q9NSB4 513 aa6.1□□□□□ -1.43
ATRX-209ENST00000623242 SUPT16HQ9Y5B9 1047 aaKnown RBP6.1□□□□□ -1.43
ATRX-209ENST00000623242 PCDHGC5Q9Y5F6 944 aa6.1□□□□□ -1.43
ATRX-209ENST00000623242 TARBP1Q13395 1621 aaKnown RBP6.1□□□□□ -1.43
ATRX-209ENST00000623242 TLR3O15455 904 aaKnown RBP6.09□□□□□ -1.43
ATRX-209ENST00000623242 CILPO75339 1184 aa6.09□□□□□ -1.43
ATRX-209ENST00000623242 ELNP15502 786 aa6.09□□□□□ -1.43
ATRX-209ENST00000623242 DUOXA2Q1HG44 320 aa6.09□□□□□ -1.43
ATRX-209ENST00000623242 SLC43A3Q8NBI5 491 aa6.09□□□□□ -1.43
ATRX-209ENST00000623242 RASGRP4Q8TDF6 673 aa6.09□□□□□ -1.43
ATRX-209ENST00000623242 GATAD2BQ8WXI9 593 aa6.09□□□□□ -1.43
ATRX-209ENST00000623242 GPRASP2Q96D09 838 aa6.09□□□□□ -1.43
ATRX-209ENST00000623242 SPOCK3Q9BQ16 436 aa6.09□□□□□ -1.43
ATRX-209ENST00000623242 WDR18Q9BV38 432 aa6.09□□□□□ -1.43
ATRX-209ENST00000623242 TMPRSS13Q9BYE2 586 aa6.09□□□□□ -1.43
ATRX-209ENST00000623242 EIF4G3O43432 1585 aaKnown RBP6.09□□□□□ -1.43
ATRX-209ENST00000623242 SNAPC4Q5SXM2 1469 aa6.09□□□□□ -1.44
ATRX-209ENST00000623242 CARMIL1Q5VZK9 1371 aa6.08□□□□□ -1.44
ATRX-209ENST00000623242 SPDYE3A6NKU9 549 aa6.08□□□□□ -1.44
ATRX-209ENST00000623242 EIF4EBP3O60516 100 aaPredicted RBP6.08□□□□□ -1.44
ATRX-209ENST00000623242 PDE3AQ14432 1141 aa6.08□□□□□ -1.44
ATRX-209ENST00000623242 INPP5AQ14642 412 aa6.08□□□□□ -1.44
ATRX-209ENST00000623242 KIF4BQ2VIQ3 1234 aa6.08□□□□□ -1.44
ATRX-209ENST00000623242 SCARA3Q6AZY7 606 aa6.08□□□□□ -1.44
ATRX-209ENST00000623242 IGF2-ASQ6U949 168 aa6.08□□□□□ -1.44
ATRX-209ENST00000623242 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.08□□□□□ -1.44
ATRX-209ENST00000623242 LRRC3Q9BY71 257 aa6.08□□□□□ -1.44
ATRX-209ENST00000623242 NOP53Q9NZM5 478 aaKnown RBP6.08□□□□□ -1.44
ATRX-209ENST00000623242 KRBA1A5PL33 1030 aa6.07□□□□□ -1.44
ATRX-209ENST00000623242 AOC2O75106 756 aa6.07□□□□□ -1.44
ATRX-209ENST00000623242 ITGB2P05107 769 aa6.07□□□□□ -1.44
ATRX-209ENST00000623242 PRRT3Q5FWE3 981 aa6.07□□□□□ -1.44
ATRX-209ENST00000623242 LRFN4Q6PJG9 635 aa6.07□□□□□ -1.44
ATRX-209ENST00000623242 ACAD11Q709F0 780 aa6.07□□□□□ -1.44
ATRX-209ENST00000623242 SLITRK4Q8IW52 837 aa6.07□□□□□ -1.44
ATRX-209ENST00000623242 AGGF1Q8N302 714 aaeCLIP6.07□□□□□ -1.442e-9■□□□□ 8.6
ATRX-209ENST00000623242 GMLQ99445 158 aa6.07□□□□□ -1.44
ATRX-209ENST00000623242 RUSC1Q9BVN2 902 aa6.07□□□□□ -1.44
ATRX-209ENST00000623242 GINM1Q9NU53 330 aa6.07□□□□□ -1.44
ATRX-209ENST00000623242 PCDHA4Q9UN74 947 aa6.07□□□□□ -1.44
ATRX-209ENST00000623242 WDR97A6NE52 1622 aa6.07□□□□□ -1.44
ATRX-209ENST00000623242 ABCA5Q8WWZ7 1642 aa6.07□□□□□ -1.44
ATRX-209ENST00000623242 MEGF11A6BM72 1044 aa6.06□□□□□ -1.44
ATRX-209ENST00000623242 F8W735 103 aaPredicted RBP6.06□□□□□ -1.44
ATRX-209ENST00000623242 GFRA2O00451 464 aa6.06□□□□□ -1.44
ATRX-209ENST00000623242 IGSF3O75054 1194 aa6.06□□□□□ -1.44
ATRX-209ENST00000623242 ALX3O95076 343 aa6.06□□□□□ -1.44
ATRX-209ENST00000623242 SPATA31C1P0DKV0 1188 aa6.06□□□□□ -1.44
ATRX-209ENST00000623242 ATF4P18848 351 aaPredicted RBP6.06□□□□□ -1.44
ATRX-209ENST00000623242 LMNB1P20700 586 aa6.06□□□□□ -1.44
ATRX-209ENST00000623242 ZC3H12AQ5D1E8 599 aaKnown RBP6.06□□□□□ -1.44
ATRX-209ENST00000623242 EXOSC6Q5RKV6 272 aaKnown RBP6.06□□□□□ -1.44
ATRX-209ENST00000623242 PLPPR2Q96GM1 343 aa6.06□□□□□ -1.44
ATRX-209ENST00000623242 ACSBG1Q96GR2 724 aa6.06□□□□□ -1.44
ATRX-209ENST00000623242 MRPL18Q9H0U6 180 aaKnown RBP6.06□□□□□ -1.44
ATRX-209ENST00000623242 PPP1R9AQ9ULJ8 1098 aa6.06□□□□□ -1.44
ATRX-209ENST00000623242 POLR3KQ9Y2Y1 108 aaPredicted RBP6.06□□□□□ -1.44
ATRX-209ENST00000623242 FHAD1B1AJZ9 1412 aa6.06□□□□□ -1.44
ATRX-209ENST00000623242 ERICH3Q5RHP9 1530 aa6.05□□□□□ -1.44
ATRX-209ENST00000623242 MAGI1Q96QZ7 1491 aaPredicted RBP6.05□□□□□ -1.44
ATRX-209ENST00000623242 LOC105371045A0A1W2PR82 267 aa6.05□□□□□ -1.44
ATRX-209ENST00000623242 TMPRSS2O15393 492 aa6.05□□□□□ -1.44
ATRX-209ENST00000623242 PROCP04070 461 aa6.05□□□□□ -1.44
ATRX-209ENST00000623242 RPL6Q02878 288 aaKnown RBP6.05□□□□□ -1.44
ATRX-209ENST00000623242 APOBRQ0VD83 1088 aa6.05□□□□□ -1.44
ATRX-209ENST00000623242 MPP2Q14168 576 aa6.05□□□□□ -1.44
ATRX-209ENST00000623242 SEZ6Q53EL9 994 aa6.05□□□□□ -1.44
ATRX-209ENST00000623242 WIPI1Q5MNZ9 446 aaPredicted RBP6.05□□□□□ -1.44
ATRX-209ENST00000623242 REC114Q7Z4M0 266 aa6.05□□□□□ -1.44
ATRX-209ENST00000623242 TMEM130Q8N3G9 435 aa6.05□□□□□ -1.44
ATRX-209ENST00000623242 DCAF11Q8TEB1 546 aa6.05□□□□□ -1.44
ATRX-209ENST00000623242 SREK1Q8WXA9 508 aaKnown RBP6.05□□□□□ -1.44
ATRX-209ENST00000623242 NKD1Q969G9 470 aa6.05□□□□□ -1.44
ATRX-209ENST00000623242 LENG1Q96BZ8 264 aaPredicted RBP6.05□□□□□ -1.44
ATRX-209ENST00000623242 BRMS1Q9HCU9 246 aa6.05□□□□□ -1.44
ATRX-209ENST00000623242 EFR3BQ9Y2G0 817 aa6.05□□□□□ -1.44
ATRX-209ENST00000623242 CSADQ9Y600 493 aa6.05□□□□□ -1.44
ATRX-209ENST00000623242 ROBO2Q9HCK4 1378 aa6.05□□□□□ -1.44
ATRX-209ENST00000623242 PBRM1Q86U86 1689 aa6.04□□□□□ -1.44
ATRX-209ENST00000623242 GOLGA3Q08378 1498 aa6.04□□□□□ -1.44
ATRX-209ENST00000623242 RAPGEF2Q9Y4G8 1499 aa6.04□□□□□ -1.44
ATRX-209ENST00000623242 DCDC2CA8MYV0 355 aa6.04□□□□□ -1.44
ATRX-209ENST00000623242 TIAF1O95411 115 aa6.04□□□□□ -1.44
ATRX-209ENST00000623242 FGRP09769 529 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms