RNA–Protein interactions for RNA: ENST00000612778.4

MUC1-225, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-225ENST00000612778 SBK1Q52WX2 424 aa16.32■□□□□ 0.2
MUC1-225ENST00000612778 RALYLQ86SE5 291 aaKnown RBP16.32■□□□□ 0.2
MUC1-225ENST00000612778 MB21D2Q8IYB1 491 aaPredicted RBP16.32■□□□□ 0.2
MUC1-225ENST00000612778 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
MUC1-225ENST00000612778 NKX2-3Q8TAU0 364 aa16.32■□□□□ 0.2
MUC1-225ENST00000612778 USP40Q9NVE5 1235 aa16.32■□□□□ 0.2
MUC1-225ENST00000612778 ARPP21Q9UBL0 812 aaPredicted RBP16.32■□□□□ 0.2
MUC1-225ENST00000612778 SERPINA10Q9UK55 444 aa16.32■□□□□ 0.2
MUC1-225ENST00000612778 LIMCH1Q9UPQ0 1083 aa16.32■□□□□ 0.2
MUC1-225ENST00000612778 ARFGEF1Q9Y6D6 1849 aa16.32■□□□□ 0.2
MUC1-225ENST00000612778 NEDD4P46934 1319 aa16.32■□□□□ 0.2
MUC1-225ENST00000612778 USP17L8P0C7I0 530 aa16.31■□□□□ 0.2
MUC1-225ENST00000612778 CYP2D6P10635 497 aa16.31■□□□□ 0.2
MUC1-225ENST00000612778 RBM5P52756 815 aaKnown RBP eCLIP16.31■□□□□ 0.2
MUC1-225ENST00000612778 TOB2Q14106 344 aaPredicted RBP16.31■□□□□ 0.2
MUC1-225ENST00000612778 CIAPIN1Q6FI81 312 aa16.31■□□□□ 0.2
MUC1-225ENST00000612778 MFSD6Q6ZSS7 791 aa16.31■□□□□ 0.2
MUC1-225ENST00000612778 CHST3Q7LGC8 479 aa16.31■□□□□ 0.2
MUC1-225ENST00000612778 STAG1Q8WVM7 1258 aa16.31■□□□□ 0.2
MUC1-225ENST00000612778 LRRC2Q9BYS8 371 aa16.31■□□□□ 0.2
MUC1-225ENST00000612778 UTRNP46939 3433 aa16.31■□□□□ 0.2
MUC1-225ENST00000612778 CDC42EP5Q6NZY7 148 aa16.31■□□□□ 0.2
MUC1-225ENST00000612778 Q6ZUG5 572 aa16.31■□□□□ 0.2
MUC1-225ENST00000612778 FLT1P17948 1338 aa16.3■□□□□ 0.2
MUC1-225ENST00000612778 B4E1Z4 1266 aa16.3■□□□□ 0.2
MUC1-225ENST00000612778 WDHD1O75717 1129 aaPredicted RBP16.3■□□□□ 0.2
MUC1-225ENST00000612778 MCM5P33992 734 aa16.3■□□□□ 0.2
MUC1-225ENST00000612778 ANTXR2P58335 489 aa16.3■□□□□ 0.2
MUC1-225ENST00000612778 TNIP1Q15025 636 aa16.3■□□□□ 0.2
MUC1-225ENST00000612778 ANKRD1Q15327 319 aa16.3■□□□□ 0.2
MUC1-225ENST00000612778 AGBL3Q8NEM8 1001 aa16.3■□□□□ 0.2
MUC1-225ENST00000612778 RNF41Q9H4P4 317 aaPredicted RBP16.3■□□□□ 0.2
MUC1-225ENST00000612778 SAP30BPQ9UHR5 308 aaKnown RBP16.3■□□□□ 0.2
MUC1-225ENST00000612778 FZD9O00144 591 aa16.29■□□□□ 0.2
MUC1-225ENST00000612778 PRC1O43663 620 aa16.29■□□□□ 0.2
MUC1-225ENST00000612778 HSP90AA1P07900 732 aaKnown RBP16.29■□□□□ 0.2
MUC1-225ENST00000612778 SLC4A8Q2Y0W8 1093 aa16.29■□□□□ 0.2
MUC1-225ENST00000612778 CFAP100Q494V2 611 aa16.29■□□□□ 0.2
MUC1-225ENST00000612778 C12orf60Q5U649 245 aa16.29■□□□□ 0.2
MUC1-225ENST00000612778 CNNM2Q9H8M5 875 aa16.29■□□□□ 0.2
MUC1-225ENST00000612778 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
MUC1-225ENST00000612778 TPCN1Q9ULQ1 816 aa16.29■□□□□ 0.2
MUC1-225ENST00000612778 LAMA4Q16363 1823 aa16.29■□□□□ 0.2
MUC1-225ENST00000612778 YBX3P16989 372 aaKnown RBP eCLIP16.29■□□□□ 0.2
MUC1-225ENST00000612778 FGD1P98174 961 aa16.29■□□□□ 0.2
MUC1-225ENST00000612778 PICALMQ13492 652 aa16.29■□□□□ 0.2
MUC1-225ENST00000612778 RRP12Q5JTH9 1297 aaKnown RBP16.29■□□□□ 0.2
MUC1-225ENST00000612778 CYB5R4Q7L1T6 521 aa16.29■□□□□ 0.2
MUC1-225ENST00000612778 OGFOD1Q8N543 542 aa16.29■□□□□ 0.2
MUC1-225ENST00000612778 KRT23Q9C075 422 aa16.29■□□□□ 0.2
MUC1-225ENST00000612778 SLKQ9H2G2 1235 aaPredicted RBP16.29■□□□□ 0.2
MUC1-225ENST00000612778 DDX4Q9NQI0 724 aaKnown RBP16.29■□□□□ 0.2
MUC1-225ENST00000612778 TOMM22Q9NS69 142 aa16.29■□□□□ 0.2
MUC1-225ENST00000612778 PSME4Q14997 1843 aa16.28■□□□□ 0.2
MUC1-225ENST00000612778 ADAMTSL1Q8N6G6 1762 aa16.28■□□□□ 0.2
MUC1-225ENST00000612778 KDM4AO75164 1064 aa16.28■□□□□ 0.2
MUC1-225ENST00000612778 LARGE1O95461 756 aa16.28■□□□□ 0.2
MUC1-225ENST00000612778 FGRP09769 529 aa16.28■□□□□ 0.2
MUC1-225ENST00000612778 BRF1Q92994 677 aa16.28■□□□□ 0.2
MUC1-225ENST00000612778 PRMT6Q96LA8 375 aaPredicted RBP16.28■□□□□ 0.2
MUC1-225ENST00000612778 AGXT2Q9BYV1 514 aa16.28■□□□□ 0.2
MUC1-225ENST00000612778 ZSWIM5Q9P217 1185 aa16.28■□□□□ 0.2
MUC1-225ENST00000612778 HDAC9Q9UKV0 1011 aa16.28■□□□□ 0.2
MUC1-225ENST00000612778 TIAM2Q8IVF5 1701 aa16.28■□□□□ 0.2
MUC1-225ENST00000612778 BAZ2AQ9UIF9 1905 aaKnown RBP16.27■□□□□ 0.2
MUC1-225ENST00000612778 POLR3DP05423 398 aaPredicted RBP16.27■□□□□ 0.2
MUC1-225ENST00000612778 LMNB1P20700 586 aa16.27■□□□□ 0.2
MUC1-225ENST00000612778 PLCD1P51178 756 aa16.27■□□□□ 0.2
MUC1-225ENST00000612778 EIF6P56537 245 aaKnown RBP16.27■□□□□ 0.2
MUC1-225ENST00000612778 CUL4AQ13619 759 aa16.27■□□□□ 0.2
MUC1-225ENST00000612778 ME3Q16798 604 aa16.27■□□□□ 0.2
MUC1-225ENST00000612778 AMOTL1Q8IY63 956 aa16.27■□□□□ 0.2
MUC1-225ENST00000612778 ZSCAN31Q96LW9 406 aaPredicted RBP16.27■□□□□ 0.2
MUC1-225ENST00000612778 GPHNQ9NQX3 736 aaPredicted RBP16.27■□□□□ 0.2
MUC1-225ENST00000612778 WDR19Q8NEZ3 1342 aa16.27■□□□□ 0.19
MUC1-225ENST00000612778 PRDM1O75626 825 aa16.26■□□□□ 0.19
MUC1-225ENST00000612778 SLC3A2P08195 630 aaKnown RBP16.26■□□□□ 0.19
MUC1-225ENST00000612778 CACNB3P54284 484 aa16.26■□□□□ 0.19
MUC1-225ENST00000612778 NFIAQ12857 509 aa16.26■□□□□ 0.19
MUC1-225ENST00000612778 FBXL16Q8N461 479 aa16.26■□□□□ 0.19
MUC1-225ENST00000612778 TDRD3Q9H7E2 651 aaKnown RBP16.26■□□□□ 0.19
MUC1-225ENST00000612778 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.26■□□□□ 0.19
MUC1-225ENST00000612778 PCP11498 1178 aaKnown RBP16.26■□□□□ 0.19
MUC1-225ENST00000612778 DYNLL2Q96FJ2 89 aa16.26■□□□□ 0.19
MUC1-225ENST00000612778 SH2B1Q9NRF2 756 aaPredicted RBP16.26■□□□□ 0.19
MUC1-225ENST00000612778 SPDYE2BA6NHP3 402 aa16.25■□□□□ 0.19
MUC1-225ENST00000612778 SPDYE6P0CI01 402 aa16.25■□□□□ 0.19
MUC1-225ENST00000612778 APOBRQ0VD83 1088 aa16.25■□□□□ 0.19
MUC1-225ENST00000612778 DLGAP5Q15398 846 aa16.25■□□□□ 0.19
MUC1-225ENST00000612778 ESR2Q92731 530 aa16.25■□□□□ 0.19
MUC1-225ENST00000612778 IDI2Q9BXS1 227 aa16.25■□□□□ 0.19
MUC1-225ENST00000612778 GJA3Q9Y6H8 435 aa16.25■□□□□ 0.19
MUC1-225ENST00000612778 ZNF541Q9H0D2 1346 aa16.25■□□□□ 0.19
MUC1-225ENST00000612778 SHTN1A0MZ66 631 aa16.24■□□□□ 0.19
MUC1-225ENST00000612778 ORC4O43929 436 aa16.24■□□□□ 0.19
MUC1-225ENST00000612778 RPS12P25398 132 aaKnown RBP16.24■□□□□ 0.19
MUC1-225ENST00000612778 PDE4BQ07343 736 aa16.24■□□□□ 0.19
MUC1-225ENST00000612778 OSBPL5Q9H0X9 879 aaPredicted RBP16.24■□□□□ 0.19
MUC1-225ENST00000612778 ROBO3Q96MS0 1386 aa16.24■□□□□ 0.19
MUC1-225ENST00000612778 RANBP6O60518 1105 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms