RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.07□□□□□ -1.12
CTC1-212ENST00000584439 TMUB1Q9BVT8 246 aa8.07□□□□□ -1.12
CTC1-212ENST00000584439 TTYH1Q9H313 450 aaPredicted RBP8.07□□□□□ -1.12
CTC1-212ENST00000584439 SEMA6BQ9H3T3 888 aa8.07□□□□□ -1.12
CTC1-212ENST00000584439 PAK6Q9NQU5 681 aaPredicted RBP8.07□□□□□ -1.12
CTC1-212ENST00000584439 GPHNQ9NQX3 736 aaPredicted RBP8.07□□□□□ -1.12
CTC1-212ENST00000584439 MED23Q9ULK4 1368 aa8.07□□□□□ -1.12
CTC1-212ENST00000584439 PIEZO1Q92508 2521 aa8.06□□□□□ -1.12
CTC1-212ENST00000584439 MYO3BQ8WXR4 1341 aa8.06□□□□□ -1.12
CTC1-212ENST00000584439 HTATSF1O43719 755 aaKnown RBP8.06□□□□□ -1.12
CTC1-212ENST00000584439 ADCY3O60266 1144 aa8.06□□□□□ -1.12
CTC1-212ENST00000584439 RFX1P22670 979 aa8.06□□□□□ -1.12
CTC1-212ENST00000584439 CFAP100Q494V2 611 aa8.06□□□□□ -1.12
CTC1-212ENST00000584439 ZNF697Q5TEC3 545 aa8.06□□□□□ -1.12
CTC1-212ENST00000584439 BANK1Q8NDB2 785 aa8.06□□□□□ -1.12
CTC1-212ENST00000584439 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.06□□□□□ -1.12
CTC1-212ENST00000584439 PPP2R3BQ9Y5P8 575 aa8.06□□□□□ -1.12
CTC1-212ENST00000584439 SNCAIPQ9Y6H5 919 aa8.06□□□□□ -1.12
CTC1-212ENST00000584439 PFASO15067 1338 aa8.05□□□□□ -1.12
CTC1-212ENST00000584439 RLFQ13129 1914 aa8.05□□□□□ -1.12
CTC1-212ENST00000584439 TBC1D12O60347 775 aa8.05□□□□□ -1.12
CTC1-212ENST00000584439 RFC5P40937 340 aa8.05□□□□□ -1.12
CTC1-212ENST00000584439 KRT24Q2M2I5 525 aa8.05□□□□□ -1.12
CTC1-212ENST00000584439 TJAP1Q5JTD0 557 aa8.05□□□□□ -1.12
CTC1-212ENST00000584439 MTMR14Q8NCE2 650 aa8.05□□□□□ -1.12
CTC1-212ENST00000584439 SLAIN1Q8ND83 568 aa8.05□□□□□ -1.12
CTC1-212ENST00000584439 ZKSCAN4Q969J2 545 aaPredicted RBP8.05□□□□□ -1.12
CTC1-212ENST00000584439 MINPP1Q9UNW1 487 aa8.05□□□□□ -1.12
CTC1-212ENST00000584439 JAG2Q9Y219 1238 aa8.05□□□□□ -1.12
CTC1-212ENST00000584439 SYNGAP1Q96PV0 1343 aa8.04□□□□□ -1.12
CTC1-212ENST00000584439 CHD7Q9P2D1 2997 aa8.04□□□□□ -1.12
CTC1-212ENST00000584439 SNAP23O00161 211 aa8.04□□□□□ -1.12
CTC1-212ENST00000584439 U2AF1L5P0DN76 240 aaPredicted RBP8.04□□□□□ -1.12
CTC1-212ENST00000584439 CETPP11597 493 aa8.04□□□□□ -1.12
CTC1-212ENST00000584439 HOXD10P28358 340 aa8.04□□□□□ -1.12
CTC1-212ENST00000584439 SSTR3P32745 418 aaPredicted RBP8.04□□□□□ -1.12
CTC1-212ENST00000584439 ABL2P42684 1182 aa8.04□□□□□ -1.12
CTC1-212ENST00000584439 FLT3LGP49771 235 aa8.04□□□□□ -1.12
CTC1-212ENST00000584439 CCT4P50991 539 aaKnown RBP8.04□□□□□ -1.12
CTC1-212ENST00000584439 CLCN6P51797 869 aa8.04□□□□□ -1.12
CTC1-212ENST00000584439 MAP3K9P80192 1104 aa8.04□□□□□ -1.12
CTC1-212ENST00000584439 U2AF1Q01081 240 aaKnown RBP eCLIP8.04□□□□□ -1.12
CTC1-212ENST00000584439 TRIM32Q13049 653 aa8.04□□□□□ -1.12
CTC1-212ENST00000584439 MOGSQ13724 837 aa8.04□□□□□ -1.12
CTC1-212ENST00000584439 TMEM39BQ9GZU3 492 aa8.04□□□□□ -1.12
CTC1-212ENST00000584439 COA1Q9GZY4 146 aa8.04□□□□□ -1.12
CTC1-212ENST00000584439 CACNA1AO00555 2505 aa8.04□□□□□ -1.12
CTC1-212ENST00000584439 PDHXO00330 501 aa8.03□□□□□ -1.12
CTC1-212ENST00000584439 CYP2C8P10632 490 aa8.03□□□□□ -1.12
CTC1-212ENST00000584439 BCRP11274 1271 aa8.03□□□□□ -1.12
CTC1-212ENST00000584439 FOSL2P15408 326 aa8.03□□□□□ -1.12
CTC1-212ENST00000584439 CLCN1P35523 988 aa8.03□□□□□ -1.12
CTC1-212ENST00000584439 ALYREFQ86V81 257 aaKnown RBP8.03□□□□□ -1.12
CTC1-212ENST00000584439 ANKRD18AQ8IVF6 992 aa8.03□□□□□ -1.12
CTC1-212ENST00000584439 WWC1Q8IX03 1113 aa8.03□□□□□ -1.12
CTC1-212ENST00000584439 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.03□□□□□ -1.12
CTC1-212ENST00000584439 PNISRQ8TF01 805 aaKnown RBP8.03□□□□□ -1.12
CTC1-212ENST00000584439 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.03□□□□□ -1.12
CTC1-212ENST00000584439 TDRD3Q9H7E2 651 aaKnown RBP8.03□□□□□ -1.12
CTC1-212ENST00000584439 RBM47A0AV96 593 aaKnown RBP8.02□□□□□ -1.13
CTC1-212ENST00000584439 TCP10L2B9ZVM9 353 aa8.02□□□□□ -1.13
CTC1-212ENST00000584439 DSG2Q14126 1118 aa8.02□□□□□ -1.13
CTC1-212ENST00000584439 LRRC26Q2I0M4 334 aa8.02□□□□□ -1.13
CTC1-212ENST00000584439 MYSM1Q5VVJ2 828 aa8.02□□□□□ -1.13
CTC1-212ENST00000584439 HELBQ8NG08 1087 aaPredicted RBP8.02□□□□□ -1.13
CTC1-212ENST00000584439 PLBD2Q8NHP8 589 aa8.02□□□□□ -1.13
CTC1-212ENST00000584439 NECAB3Q96P71 396 aaPredicted RBP8.02□□□□□ -1.13
CTC1-212ENST00000584439 NBPF3Q9H094 633 aa8.02□□□□□ -1.13
CTC1-212ENST00000584439 C11orf49Q9H6J7 331 aa8.02□□□□□ -1.13
CTC1-212ENST00000584439 ZCCHC17Q9NP64 241 aaKnown RBP8.02□□□□□ -1.13
CTC1-212ENST00000584439 GPCPD1Q9NPB8 672 aa8.02□□□□□ -1.13
CTC1-212ENST00000584439 CHPF2Q9P2E5 772 aa8.02□□□□□ -1.13
CTC1-212ENST00000584439 ZNF70Q9UC06 446 aaPredicted RBP8.02□□□□□ -1.13
CTC1-212ENST00000584439 CSADQ9Y600 493 aa8.02□□□□□ -1.13
CTC1-212ENST00000584439 FAM205AQ6ZU69 1335 aa8.02□□□□□ -1.13
CTC1-212ENST00000584439 MMP14P50281 582 aa8.01□□□□□ -1.13
CTC1-212ENST00000584439 FCGRTP55899 365 aa8.01□□□□□ -1.13
CTC1-212ENST00000584439 SNAPC2Q13487 334 aa8.01□□□□□ -1.13
CTC1-212ENST00000584439 SHHQ15465 462 aa8.01□□□□□ -1.13
CTC1-212ENST00000584439 CCDC152Q4G0S7 254 aa8.01□□□□□ -1.13
CTC1-212ENST00000584439 C9orf50Q5SZB4 431 aa8.01□□□□□ -1.13
CTC1-212ENST00000584439 ERO1BQ86YB8 467 aa8.01□□□□□ -1.13
CTC1-212ENST00000584439 ZBTB38Q8NAP3 1195 aaPredicted RBP8.01□□□□□ -1.13
CTC1-212ENST00000584439 ADAMTS19Q8TE59 1207 aa8.01□□□□□ -1.13
CTC1-212ENST00000584439 PXYLP1Q8TE99 480 aa8.01□□□□□ -1.13
CTC1-212ENST00000584439 PLEKHF1Q96S99 279 aa8.01□□□□□ -1.13
CTC1-212ENST00000584439 CD209Q9NNX6 404 aa8.01□□□□□ -1.13
CTC1-212ENST00000584439 KIAA1522Q9P206 1035 aaPredicted RBP8.01□□□□□ -1.13
CTC1-212ENST00000584439 TSPYL4Q9UJ04 414 aa8.01□□□□□ -1.13
CTC1-212ENST00000584439 TRANK1O15050 2925 aa8.01□□□□□ -1.13
CTC1-212ENST00000584439 CFAP54Q96N23 3096 aa8□□□□□ -1.13
CTC1-212ENST00000584439 USP34Q70CQ2 3546 aa8□□□□□ -1.13
CTC1-212ENST00000584439 MYO1BO43795 1136 aa8□□□□□ -1.13
CTC1-212ENST00000584439 PDE8AO60658 829 aa8□□□□□ -1.13
CTC1-212ENST00000584439 WDHD1O75717 1129 aaPredicted RBP8□□□□□ -1.13
CTC1-212ENST00000584439 RBM5P52756 815 aaKnown RBP eCLIP8□□□□□ -1.13
CTC1-212ENST00000584439 CACNB3P54284 484 aa8□□□□□ -1.13
CTC1-212ENST00000584439 PPIL2Q13356 520 aa8□□□□□ -1.13
CTC1-212ENST00000584439 GPAT2Q6NUI2 795 aa8□□□□□ -1.13
CTC1-212ENST00000584439 ANKRD23Q86SG2 305 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms