RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 UPF3BQ9BZI7 483 aaKnown RBP21.57■■□□□ 1.04
NDEL1-217ENST00000583683 CASTP20810 708 aaKnown RBP21.56■■□□□ 1.04
NDEL1-217ENST00000583683 PPARAQ07869 468 aa21.56■■□□□ 1.04
NDEL1-217ENST00000583683 COL9A3Q14050 684 aaPredicted RBP21.56■■□□□ 1.04
NDEL1-217ENST00000583683 DLGAP5Q15398 846 aa21.56■■□□□ 1.04
NDEL1-217ENST00000583683 TBC1D10CQ8IV04 446 aa21.56■■□□□ 1.04
NDEL1-217ENST00000583683 ZSWIM6Q9HCJ5 1215 aa21.56■■□□□ 1.04
NDEL1-217ENST00000583683 MCM9Q9NXL9 1143 aa21.56■■□□□ 1.04
NDEL1-217ENST00000583683 CYP2D7A0A087X1C5 515 aa21.55■■□□□ 1.04
NDEL1-217ENST00000583683 MINDY4BA8MYZ0 360 aa21.55■■□□□ 1.04
NDEL1-217ENST00000583683 SBK1Q52WX2 424 aa21.55■■□□□ 1.04
NDEL1-217ENST00000583683 TDRD3Q9H7E2 651 aaKnown RBP21.55■■□□□ 1.04
NDEL1-217ENST00000583683 MYOZ2Q9NPC6 264 aa21.55■■□□□ 1.04
NDEL1-217ENST00000583683 DDX4Q9NQI0 724 aaKnown RBP21.55■■□□□ 1.04
NDEL1-217ENST00000583683 ARPP21Q9UBL0 812 aaPredicted RBP21.55■■□□□ 1.04
NDEL1-217ENST00000583683 ANAPC4Q9UJX5 808 aa21.55■■□□□ 1.04
NDEL1-217ENST00000583683 SMIM22K7EJ46 135 aa21.55■■□□□ 1.04
NDEL1-217ENST00000583683 PSMA5P28066 241 aa21.55■■□□□ 1.04
NDEL1-217ENST00000583683 NEK4P51957 841 aa21.55■■□□□ 1.04
NDEL1-217ENST00000583683 CTDSPL2Q05D32 466 aa21.55■■□□□ 1.04
NDEL1-217ENST00000583683 MICALL2Q8IY33 904 aa21.55■■□□□ 1.04
NDEL1-217ENST00000583683 ZBED3Q96IU2 234 aaPredicted RBP21.55■■□□□ 1.04
NDEL1-217ENST00000583683 NEK1Q96PY6 1258 aa21.55■■□□□ 1.04
NDEL1-217ENST00000583683 CNOT7Q9UIV1 285 aaKnown RBP21.55■■□□□ 1.04
NDEL1-217ENST00000583683 CPA1P15085 419 aa21.54■■□□□ 1.04
NDEL1-217ENST00000583683 EVX2Q03828 476 aa21.54■■□□□ 1.04
NDEL1-217ENST00000583683 NFIAQ12857 509 aa21.54■■□□□ 1.04
NDEL1-217ENST00000583683 CACNB3P54284 484 aa21.53■■□□□ 1.04
NDEL1-217ENST00000583683 PICALMQ13492 652 aa21.53■■□□□ 1.04
NDEL1-217ENST00000583683 RUFY3Q7L099 469 aa21.53■■□□□ 1.04
NDEL1-217ENST00000583683 IDI2Q9BXS1 227 aa21.53■■□□□ 1.04
NDEL1-217ENST00000583683 CD2BP2O95400 341 aaKnown RBP21.52■■□□□ 1.04
NDEL1-217ENST00000583683 CYP2D6P10635 497 aa21.52■■□□□ 1.04
NDEL1-217ENST00000583683 C12orf60Q5U649 245 aa21.52■■□□□ 1.04
NDEL1-217ENST00000583683 BLOC1S2Q6QNY1 142 aa21.52■■□□□ 1.04
NDEL1-217ENST00000583683 SAP30BPQ9UHR5 308 aaKnown RBP21.52■■□□□ 1.04
NDEL1-217ENST00000583683 CYP46A1Q9Y6A2 500 aa21.52■■□□□ 1.04
NDEL1-217ENST00000583683 TACC3Q9Y6A5 838 aa21.52■■□□□ 1.04
NDEL1-217ENST00000583683 WNT10BO00744 389 aa21.52■■□□□ 1.04
NDEL1-217ENST00000583683 DDNO94850 711 aaPredicted RBP21.52■■□□□ 1.04
NDEL1-217ENST00000583683 EGFRP00533 1210 aa21.52■■□□□ 1.04
NDEL1-217ENST00000583683 SLC4A8Q2Y0W8 1093 aa21.52■■□□□ 1.04
NDEL1-217ENST00000583683 AKNAD1Q5T1N1 836 aa21.52■■□□□ 1.04
NDEL1-217ENST00000583683 STAG1Q8WVM7 1258 aa21.52■■□□□ 1.04
NDEL1-217ENST00000583683 INCENPQ9NQS7 918 aa21.52■■□□□ 1.04
NDEL1-217ENST00000583683 GPRC5DQ9NZD1 345 aa21.52■■□□□ 1.04
NDEL1-217ENST00000583683 OSBPL5Q9H0X9 879 aaPredicted RBP21.51■■□□□ 1.03
NDEL1-217ENST00000583683 FAM198AQ9UFP1 575 aa21.51■■□□□ 1.03
NDEL1-217ENST00000583683 NEDD4P46934 1319 aa21.51■■□□□ 1.03
NDEL1-217ENST00000583683 ST18O60284 1047 aa21.5■■□□□ 1.03
NDEL1-217ENST00000583683 NPM3O75607 178 aaKnown RBP21.5■■□□□ 1.03
NDEL1-217ENST00000583683 HMGB1P09429 215 aaKnown RBP21.5■■□□□ 1.03
NDEL1-217ENST00000583683 PLCD1P51178 756 aa21.5■■□□□ 1.03
NDEL1-217ENST00000583683 NBPF9Q3BBW0 867 aa21.5■■□□□ 1.03
NDEL1-217ENST00000583683 SPDYE2Q495Y8 402 aa21.5■■□□□ 1.03
NDEL1-217ENST00000583683 MFSD6Q6ZSS7 791 aa21.5■■□□□ 1.03
NDEL1-217ENST00000583683 SAMD7Q7Z3H4 446 aa21.5■■□□□ 1.03
NDEL1-217ENST00000583683 AMOTL1Q8IY63 956 aa21.5■■□□□ 1.03
NDEL1-217ENST00000583683 SNX21Q969T3 373 aa21.5■■□□□ 1.03
NDEL1-217ENST00000583683 TTC14Q96N46 770 aa21.5■■□□□ 1.03
NDEL1-217ENST00000583683 ZNF70Q9UC06 446 aaPredicted RBP21.5■■□□□ 1.03
NDEL1-217ENST00000583683 ZC3H4Q9UPT8 1303 aaKnown RBP21.5■■□□□ 1.03
NDEL1-217ENST00000583683 POLR3DP05423 398 aaPredicted RBP21.5■■□□□ 1.03
NDEL1-217ENST00000583683 RPS6KB1P23443 525 aa21.5■■□□□ 1.03
NDEL1-217ENST00000583683 STK11IPQ8N1F8 1099 aa21.5■■□□□ 1.03
NDEL1-217ENST00000583683 IL27Q8NEV9 243 aa21.5■■□□□ 1.03
NDEL1-217ENST00000583683 NCOA7Q8NI08 942 aa21.5■■□□□ 1.03
NDEL1-217ENST00000583683 ROBO3Q96MS0 1386 aa21.49■■□□□ 1.03
NDEL1-217ENST00000583683 CLRN2A0PK11 232 aa21.49■■□□□ 1.03
NDEL1-217ENST00000583683 H7C1D1 291 aa21.49■■□□□ 1.03
NDEL1-217ENST00000583683 RBM26Q5T8P6 1007 aaKnown RBP21.49■■□□□ 1.03
NDEL1-217ENST00000583683 ZFPM1Q8IX07 1006 aa21.49■■□□□ 1.03
NDEL1-217ENST00000583683 NKX2-3Q8TAU0 364 aa21.49■■□□□ 1.03
NDEL1-217ENST00000583683 RNF41Q9H4P4 317 aaPredicted RBP21.49■■□□□ 1.03
NDEL1-217ENST00000583683 MYO1BO43795 1136 aa21.48■■□□□ 1.03
NDEL1-217ENST00000583683 FGRP09769 529 aa21.48■■□□□ 1.03
NDEL1-217ENST00000583683 TCP10Q12799 353 aa21.48■■□□□ 1.03
NDEL1-217ENST00000583683 TRDNQ13061 729 aa21.48■■□□□ 1.03
NDEL1-217ENST00000583683 TBC1D10BQ4KMP7 808 aaPredicted RBP21.48■■□□□ 1.03
NDEL1-217ENST00000583683 DHX32Q7L7V1 743 aaKnown RBP21.48■■□□□ 1.03
NDEL1-217ENST00000583683 RALYLQ86SE5 291 aaKnown RBP21.48■■□□□ 1.03
NDEL1-217ENST00000583683 MB21D2Q8IYB1 491 aaPredicted RBP21.48■■□□□ 1.03
NDEL1-217ENST00000583683 TCEANC2Q96MN5 208 aa21.48■■□□□ 1.03
NDEL1-217ENST00000583683 TBC1D2Q9BYX2 928 aa21.48■■□□□ 1.03
NDEL1-217ENST00000583683 TMOD2Q9NZR1 351 aa21.48■■□□□ 1.03
NDEL1-217ENST00000583683 PCP11498 1178 aaKnown RBP21.48■■□□□ 1.03
NDEL1-217ENST00000583683 KIF4BQ2VIQ3 1234 aa21.48■■□□□ 1.03
NDEL1-217ENST00000583683 CNNM2Q9H8M5 875 aa21.48■■□□□ 1.03
NDEL1-217ENST00000583683 PDRG1Q9NUG6 133 aa21.48■■□□□ 1.03
NDEL1-217ENST00000583683 B4E1Z4 1266 aa21.47■■□□□ 1.03
NDEL1-217ENST00000583683 ENTPD3O75355 529 aa21.47■■□□□ 1.03
NDEL1-217ENST00000583683 SLC3A2P08195 630 aaKnown RBP21.47■■□□□ 1.03
NDEL1-217ENST00000583683 EPS15P42566 896 aa21.47■■□□□ 1.03
NDEL1-217ENST00000583683 EXOSC10Q01780 885 aaKnown RBP21.47■■□□□ 1.03
NDEL1-217ENST00000583683 DPY19L2Q6NUT2 758 aa21.47■■□□□ 1.03
NDEL1-217ENST00000583683 SIPA1L1O43166 1804 aa21.47■■□□□ 1.03
NDEL1-217ENST00000583683 FKBP1CQ5VVH2 108 aa21.46■■□□□ 1.03
NDEL1-217ENST00000583683 DYNLL2Q96FJ2 89 aa21.46■■□□□ 1.03
NDEL1-217ENST00000583683 KRT23Q9C075 422 aa21.46■■□□□ 1.03
NDEL1-217ENST00000583683 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 260.3 ms