RNA–Protein interactions for RNA: ENST00000580048.1

LINC00909-202, long intergenic non-protein coding RNA 909, humanhuman

TSL 1 (best) BASIC

Gene LINC00909, Length 3,463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00909-202ENST00000580048 ACTN3Q08043 901 aaPredicted RBP11.64□□□□□ -0.55
LINC00909-202ENST00000580048 SHC4Q6S5L8 630 aa11.64□□□□□ -0.55
LINC00909-202ENST00000580048 SSBP05455 408 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC00909-202ENST00000580048 BMP6P22004 513 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 TUBB4BP68371 445 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 ARHGEF25Q86VW2 580 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 GRAMD1CQ8IYS0 662 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 MSL3Q8N5Y2 521 aaKnown RBP11.63□□□□□ -0.55
LINC00909-202ENST00000580048 AIFM3Q96NN9 605 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 SLF1Q9BQI6 1058 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 KCNQ3O43525 872 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 TUBBP07437 444 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 CASP14P31944 242 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 NEDD9Q14511 834 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 USHBP1Q8N6Y0 703 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 JMYQ8N9B5 988 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 COG1Q8WTW3 980 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 KCNH3Q9ULD8 1083 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 KLF18A0A0U1RQI7 1052 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 E7EWF7 191 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 BRAPQ7Z569 592 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 NUTM2AQ8IVF1 878 aaPredicted RBP11.63□□□□□ -0.55
LINC00909-202ENST00000580048 SNRKQ9NRH2 765 aa11.63□□□□□ -0.55
LINC00909-202ENST00000580048 A1BGP04217 495 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 ELF1P32519 619 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 ATP1A2P50993 1020 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 SLC39A14Q15043 492 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 TRHP20396 242 aaPredicted RBP11.62□□□□□ -0.55
LINC00909-202ENST00000580048 AARSP49588 968 aaKnown RBP eCLIP11.62□□□□□ -0.55
LINC00909-202ENST00000580048 MRPS25P82663 173 aaKnown RBP11.62□□□□□ -0.55
LINC00909-202ENST00000580048 PPFIA1Q13136 1202 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 PDCLQ13371 301 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 TUBB2AQ13885 445 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 ANKRD18AQ8IVF6 992 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 TUBB2BQ9BVA1 445 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 SELENOOQ9BVL4 669 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 VEZTQ9HBM0 779 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 TRIM10Q9UDY6 481 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 ODF2LQ9ULJ1 636 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 GOLIM4O00461 696 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 COBLO75128 1261 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 RUFY1Q96T51 708 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 VIPAS39Q9H9C1 493 aa11.62□□□□□ -0.55
LINC00909-202ENST00000580048 PAX7P23759 505 aa11.61□□□□□ -0.55
LINC00909-202ENST00000580048 GPTP24298 496 aa11.61□□□□□ -0.55
LINC00909-202ENST00000580048 KIF23Q02241 960 aaPredicted RBP11.61□□□□□ -0.55
LINC00909-202ENST00000580048 SND1Q7KZF4 910 aaKnown RBP eCLIP11.61□□□□□ -0.55
LINC00909-202ENST00000580048 KIRREL3Q8IZU9 778 aa11.61□□□□□ -0.55
LINC00909-202ENST00000580048 PANX2Q96RD6 677 aa11.61□□□□□ -0.55
LINC00909-202ENST00000580048 MMS19Q96T76 1030 aa11.61□□□□□ -0.55
LINC00909-202ENST00000580048 MAN1B1Q9UKM7 699 aa11.61□□□□□ -0.55
LINC00909-202ENST00000580048 EIF3HO15372 352 aaKnown RBP eCLIP11.61□□□□□ -0.55
LINC00909-202ENST00000580048 RXRAP19793 462 aa11.61□□□□□ -0.55
LINC00909-202ENST00000580048 CCT6AP40227 531 aaKnown RBP11.61□□□□□ -0.55
LINC00909-202ENST00000580048 USP14P54578 494 aa11.61□□□□□ -0.55
LINC00909-202ENST00000580048 WDR93Q6P2C0 686 aa11.61□□□□□ -0.55
LINC00909-202ENST00000580048 DBNLQ9UJU6 430 aaKnown RBP11.61□□□□□ -0.55
LINC00909-202ENST00000580048 TTF2Q9UNY4 1162 aaKnown RBP11.61□□□□□ -0.55
LINC00909-202ENST00000580048 SALL1Q9NSC2 1324 aa11.61□□□□□ -0.55
LINC00909-202ENST00000580048 RAPGEF3O95398 923 aa11.61□□□□□ -0.55
LINC00909-202ENST00000580048 MYBL2P10244 700 aa11.61□□□□□ -0.55
LINC00909-202ENST00000580048 CDR1P51861 262 aa11.61□□□□□ -0.55
LINC00909-202ENST00000580048 SLC9C2Q5TAH2 1124 aa11.61□□□□□ -0.55
LINC00909-202ENST00000580048 KCTD16Q68DU8 428 aa11.61□□□□□ -0.55
LINC00909-202ENST00000580048 PRPF38AQ8NAV1 312 aaKnown RBP11.61□□□□□ -0.55
LINC00909-202ENST00000580048 ZNF274Q96GC6 653 aaPredicted RBP11.61□□□□□ -0.55
LINC00909-202ENST00000580048 NUP88Q99567 741 aaPredicted RBP11.61□□□□□ -0.55
LINC00909-202ENST00000580048 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.61□□□□□ -0.55
LINC00909-202ENST00000580048 ZNF609O15014 1411 aa11.6□□□□□ -0.55
LINC00909-202ENST00000580048 GRM8O00222 908 aa11.6□□□□□ -0.55
LINC00909-202ENST00000580048 MCM3P25205 808 aa11.6□□□□□ -0.55
LINC00909-202ENST00000580048 EXOSC10Q01780 885 aaKnown RBP11.6□□□□□ -0.55
LINC00909-202ENST00000580048 ZKSCAN4Q969J2 545 aaPredicted RBP11.6□□□□□ -0.55
LINC00909-202ENST00000580048 NEUROD6Q96NK8 337 aa11.6□□□□□ -0.55
LINC00909-202ENST00000580048 DACH1Q9UI36 760 aa11.6□□□□□ -0.55
LINC00909-202ENST00000580048 TFR2Q9UP52 801 aa11.6□□□□□ -0.55
LINC00909-202ENST00000580048 ACEP12821 1306 aa11.6□□□□□ -0.55
LINC00909-202ENST00000580048 CCDC189A1A4V9 331 aa11.6□□□□□ -0.55
LINC00909-202ENST00000580048 CHUKO15111 745 aa11.6□□□□□ -0.55
LINC00909-202ENST00000580048 MYO1BO43795 1136 aa11.6□□□□□ -0.55
LINC00909-202ENST00000580048 CDC25AP30304 524 aa11.6□□□□□ -0.55
LINC00909-202ENST00000580048 MATR3P43243 847 aaKnown RBP eCLIP11.6□□□□□ -0.55
LINC00909-202ENST00000580048 PROSER3Q2NL68 480 aa11.6□□□□□ -0.55
LINC00909-202ENST00000580048 VPS37DQ86XT2 251 aa11.6□□□□□ -0.55
LINC00909-202ENST00000580048 SCLT1Q96NL6 688 aa11.6□□□□□ -0.55
LINC00909-202ENST00000580048 DBNDD2Q9BQY9 259 aa11.6□□□□□ -0.55
LINC00909-202ENST00000580048 PES1O00541 588 aaKnown RBP11.59□□□□□ -0.55
LINC00909-202ENST00000580048 POLR2DO15514 142 aaKnown RBP11.59□□□□□ -0.55
LINC00909-202ENST00000580048 FXR1P51114 621 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC00909-202ENST00000580048 TFCP2Q12800 502 aa11.59□□□□□ -0.55
LINC00909-202ENST00000580048 BIRC2Q13490 618 aa11.59□□□□□ -0.55
LINC00909-202ENST00000580048 NR1I3Q14994 352 aa11.59□□□□□ -0.55
LINC00909-202ENST00000580048 POSTNQ15063 836 aa11.59□□□□□ -0.55
LINC00909-202ENST00000580048 FILIP1LQ4L180 1135 aa11.59□□□□□ -0.55
LINC00909-202ENST00000580048 NAIF1Q69YI7 327 aaPredicted RBP11.59□□□□□ -0.55
LINC00909-202ENST00000580048 RASGRP2Q7LDG7 609 aa11.59□□□□□ -0.55
LINC00909-202ENST00000580048 MIEF2Q96C03 454 aa11.59□□□□□ -0.55
LINC00909-202ENST00000580048 PXDNLA1KZ92 1463 aa11.59□□□□□ -0.55
LINC00909-202ENST00000580048 MFAP3LO75121 409 aa11.59□□□□□ -0.55
LINC00909-202ENST00000580048 TRDNQ13061 729 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms