RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	H2AFX	P16104	143 aa	Predicted RBP	13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	ADRA2B	P18089	450 aa		13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	PDC	P20941	246 aa		13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	PWP2	Q15269	919 aa	Known RBP	13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	GTF3C6	Q969F1	213 aa		13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	TRMT1	Q9NXH9	659 aa	Known RBP	13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	MYH13	Q9UKX3	1938 aa		13.87	□□□□□ -0.19
SPG7-222	ENST00000569820	TRIM37	O94972	964 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	SLC9C2	Q5TAH2	1124 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	TPTE2	Q6XPS3	522 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	CCAR2	Q8N163	923 aa	Known RBP	13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	CCDC24	Q8N4L8	307 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	NECAB1	Q8N987	351 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	TRERF1	Q96PN7	1200 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	TCRBV5S4A2T	A0A5A2	114 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	CCDC69	A6NI79	296 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	GPAA1	O43292	621 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	IDH1	O75874	414 aa	Known RBP	13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	BCAM	P50895	628 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	GTF2A1	P52655	376 aa	Predicted RBP	13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	ANKRD1	Q15327	319 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	UBE3C	Q15386	1083 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	SLC27A3	Q5K4L6	730 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	BICD2	Q8TD16	824 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	NLRP3	Q96P20	1036 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	NCAPG	Q9BPX3	1015 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	WWC3	Q9ULE0	1092 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	ZNF804B	A4D1E1	1349 aa		13.86	□□□□□ -0.19
SPG7-222	ENST00000569820	NR1I2	O75469	434 aa		13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	PDE6A	P16499	860 aa		13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	NFIX	Q14938	502 aa		13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	GRIPAP1	Q4V328	841 aa		13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	TTLL5	Q6EMB2	1281 aa		13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	BRMS1	Q9HCU9	246 aa		13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	MINPP1	Q9UNW1	487 aa		13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	FHOD1	Q9Y613	1164 aa		13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	COL1A1	P02452	1464 aa	Predicted RBP	13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	WTIP	A6NIX2	430 aa	Predicted RBP	13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	CCZ1B	P86790	482 aa		13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	CCZ1	P86791	482 aa	Predicted RBP	13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	RAD51AP2	Q09MP3	1159 aa		13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	FILIP1	Q7Z7B0	1213 aa		13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	LEO1	Q8WVC0	666 aa	Predicted RBP	13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	TFIP11	Q9UBB9	837 aa	Known RBP	13.85	□□□□□ -0.19
SPG7-222	ENST00000569820	ZNF532	Q9HCE3	1301 aa		13.85	□□□□□ -0.19
SPG7-222	ENST00000569820		E7EWF7	191 aa		13.84	□□□□□ -0.19
SPG7-222	ENST00000569820	UBE4A	Q14139	1066 aa		13.84	□□□□□ -0.19
SPG7-222	ENST00000569820	ERCC6L	Q2NKX8	1250 aa		13.84	□□□□□ -0.19
SPG7-222	ENST00000569820	TEX35	Q5T0J7	233 aa		13.84	□□□□□ -0.19
SPG7-222	ENST00000569820	RSPH14	Q9UHP6	348 aa		13.84	□□□□□ -0.19
SPG7-222	ENST00000569820	TM4SF1	P30408	202 aa		13.84	□□□□□ -0.19
SPG7-222	ENST00000569820	CLCN6	P51797	869 aa		13.84	□□□□□ -0.19
SPG7-222	ENST00000569820	IQCB1	Q15051	598 aa		13.84	□□□□□ -0.19
SPG7-222	ENST00000569820	CEP120	Q8N960	986 aa		13.84	□□□□□ -0.19
SPG7-222	ENST00000569820	RASSF4	Q9H2L5	321 aa		13.84	□□□□□ -0.19
SPG7-222	ENST00000569820	KCND1	Q9NSA2	647 aa		13.84	□□□□□ -0.19
SPG7-222	ENST00000569820	FGA	P02671	866 aa		13.83	□□□□□ -0.2
SPG7-222	ENST00000569820	HMGB1	P09429	215 aa	Known RBP	13.83	□□□□□ -0.2
SPG7-222	ENST00000569820	PNMA6A	P0CW24	399 aa	Predicted RBP	13.83	□□□□□ -0.2
SPG7-222	ENST00000569820	RPS8	P62241	208 aa	Known RBP	13.83	□□□□□ -0.2
SPG7-222	ENST00000569820	L2HGDH	Q9H9P8	463 aa		13.83	□□□□□ -0.2
SPG7-222	ENST00000569820	CHD4	Q14839	1912 aa		13.83	□□□□□ -0.2
SPG7-222	ENST00000569820	DHX16	O60231	1041 aa	Known RBP	13.82	□□□□□ -0.2
SPG7-222	ENST00000569820	GYS1	P13807	737 aa		13.82	□□□□□ -0.2
SPG7-222	ENST00000569820	SNW1	Q13573	536 aa	Known RBP	13.82	□□□□□ -0.2
SPG7-222	ENST00000569820		Q6ZUG5	572 aa		13.82	□□□□□ -0.2
SPG7-222	ENST00000569820	CACNA1S	Q13698	1873 aa		13.82	□□□□□ -0.2
SPG7-222	ENST00000569820	BECN2	A8MW95	431 aa		13.82	□□□□□ -0.2
SPG7-222	ENST00000569820	GYG1	P46976	350 aa		13.82	□□□□□ -0.2
SPG7-222	ENST00000569820	ICE2	Q659A1	982 aa		13.82	□□□□□ -0.2
SPG7-222	ENST00000569820	DHX32	Q7L7V1	743 aa	Known RBP	13.82	□□□□□ -0.2
SPG7-222	ENST00000569820	PROM2	Q8N271	834 aa		13.82	□□□□□ -0.2
SPG7-222	ENST00000569820	PATL2	C9JE40	543 aa	Known RBP	13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	PLA2G4A	P47712	749 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	TPM4	P67936	248 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	EXOSC10	Q01780	885 aa	Known RBP	13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	MAP3K12	Q12852	859 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	ZNF772	Q68DY9	489 aa	Predicted RBP	13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	CNBD1	Q8NA66	436 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	BANK1	Q8NDB2	785 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	PGBD1	Q96JS3	809 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	AGXT2	Q9BYV1	514 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	TIAM2	Q8IVF5	1701 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	TNS1	Q9HBL0	1735 aa	Known RBP	13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	GSDMD	P57764	484 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	HAND2	P61296	217 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	STX1A	Q16623	288 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	TXNRD1	Q16881	649 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	IMMT	Q16891	758 aa	Known RBP	13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	ARHGAP29	Q52LW3	1261 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	TXLNB	Q8N3L3	684 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	MAGEB6	Q8N7X4	407 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	LRRC2	Q9BYS8	371 aa		13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.81	□□□□□ -0.2
SPG7-222	ENST00000569820	PRR5L	Q6MZQ0	368 aa		13.8	□□□□□ -0.2

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