RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 GSDMDP57764 484 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 NLRP12P59046 1061 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 MAP3K12Q12852 859 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 KMT5BQ4FZB7 885 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 CEP135Q66GS9 1140 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 SPATA5Q8NB90 893 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 CALCOCO1Q9P1Z2 691 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 UBN2Q6ZU65 1347 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 MROH5Q6ZUA9 1318 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 AKAP11Q9UKA4 1901 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 TCRBV5S4A2TA0A5A2 114 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 USP27XA6NNY8 438 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 MBD4O95243 580 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 ISM2Q6H9L7 571 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 BPIFA3Q9BQP9 254 aa12.65□□□□□ -0.38
NEIL1-202ENST00000561643 IFIT3O14879 490 aaKnown RBP12.64□□□□□ -0.39
NEIL1-202ENST00000561643 CCZ1BP86790 482 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 CCZ1P86791 482 aaPredicted RBP12.64□□□□□ -0.39
NEIL1-202ENST00000561643 CTDSPL2Q05D32 466 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 IGDCC4Q8TDY8 1250 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 MPHOSPH8Q99549 860 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 XPO4Q9C0E2 1151 aaKnown RBP12.64□□□□□ -0.39
NEIL1-202ENST00000561643 TOMM22Q9NS69 142 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 TRMT1Q9NXH9 659 aaKnown RBP12.64□□□□□ -0.39
NEIL1-202ENST00000561643 IFNKQ9P0W0 207 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 SLC12A7Q9Y666 1083 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 ERVV-1B6SEH8 477 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 PATL2C9JE40 543 aaKnown RBP12.64□□□□□ -0.39
NEIL1-202ENST00000561643 SNAP23O00161 211 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 BCL9O00512 1426 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 PTPN14Q15678 1187 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 IFNL3Q8IZI9 196 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 SLC26A6Q9BXS9 759 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 ARMT1Q9H993 441 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 LY9Q9HBG7 655 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 ABCA3Q99758 1704 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 IL6STP40189 918 aaPredicted RBP12.64□□□□□ -0.39
NEIL1-202ENST00000561643 SLC20A2Q08357 652 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 RASGRF1Q13972 1273 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 SYCP1Q15431 976 aa12.64□□□□□ -0.39
NEIL1-202ENST00000561643 RRP12Q5JTH9 1297 aaKnown RBP12.64□□□□□ -0.39
NEIL1-202ENST00000561643 TULP2O00295 520 aa12.63□□□□□ -0.39
NEIL1-202ENST00000561643 NPHP1O15259 732 aa12.63□□□□□ -0.39
NEIL1-202ENST00000561643 CHRM1P11229 460 aaPredicted RBP12.63□□□□□ -0.39
NEIL1-202ENST00000561643 FGFR2P21802 821 aa12.63□□□□□ -0.39
NEIL1-202ENST00000561643 TMC6Q7Z403 805 aa12.63□□□□□ -0.39
NEIL1-202ENST00000561643 NBPF11Q86T75 865 aa12.63□□□□□ -0.39
NEIL1-202ENST00000561643 EPB41L4AQ9HCS5 686 aaPredicted RBP12.63□□□□□ -0.39
NEIL1-202ENST00000561643 ZSWIM5Q9P217 1185 aa12.63□□□□□ -0.39
NEIL1-202ENST00000561643 STRCQ7RTU9 1775 aa12.63□□□□□ -0.39
NEIL1-202ENST00000561643 EXOC5O00471 708 aa12.63□□□□□ -0.39
NEIL1-202ENST00000561643 RANBP6O60518 1105 aaKnown RBP12.63□□□□□ -0.39
NEIL1-202ENST00000561643 PPP6R2O75170 966 aa12.63□□□□□ -0.39
NEIL1-202ENST00000561643 ALX1Q15699 326 aa12.63□□□□□ -0.39
NEIL1-202ENST00000561643 SGMS1Q86VZ5 419 aa12.63□□□□□ -0.39
NEIL1-202ENST00000561643 RNF216Q9NWF9 866 aaPredicted RBP12.63□□□□□ -0.39
NEIL1-202ENST00000561643 IMPACTQ9P2X3 320 aa12.63□□□□□ -0.39
NEIL1-202ENST00000561643 LMOD1P29536 600 aaPredicted RBP12.63□□□□□ -0.39
NEIL1-202ENST00000561643 SSRP1Q08945 709 aaKnown RBP12.63□□□□□ -0.39
NEIL1-202ENST00000561643 NTRK3Q16288 839 aa12.63□□□□□ -0.39
NEIL1-202ENST00000561643 ZNF34Q8IZ26 560 aa12.63□□□□□ -0.39
NEIL1-202ENST00000561643 OSBPL5Q9H0X9 879 aaPredicted RBP12.63□□□□□ -0.39
NEIL1-202ENST00000561643 LRP6O75581 1613 aa12.62□□□□□ -0.39
NEIL1-202ENST00000561643 C4AP0C0L4 1744 aa12.62□□□□□ -0.39
NEIL1-202ENST00000561643 C4BP0C0L5 1744 aa12.62□□□□□ -0.39
NEIL1-202ENST00000561643 TDO2P48775 406 aa12.62□□□□□ -0.39
NEIL1-202ENST00000561643 SHC4Q6S5L8 630 aa12.62□□□□□ -0.39
NEIL1-202ENST00000561643 MFSD6Q6ZSS7 791 aa12.62□□□□□ -0.39
NEIL1-202ENST00000561643 STK11IPQ8N1F8 1099 aa12.62□□□□□ -0.39
NEIL1-202ENST00000561643 ZNF397Q8NF99 534 aaPredicted RBP12.62□□□□□ -0.39
NEIL1-202ENST00000561643 CLIC6Q96NY7 704 aa12.62□□□□□ -0.39
NEIL1-202ENST00000561643 UBE2Q2LH0YL09 131 aa12.62□□□□□ -0.39
NEIL1-202ENST00000561643 LIFRP42702 1097 aa12.62□□□□□ -0.39
NEIL1-202ENST00000561643 PTPAQ15257 358 aa12.62□□□□□ -0.39
NEIL1-202ENST00000561643 AKNAD1Q5T1N1 836 aa12.62□□□□□ -0.39
NEIL1-202ENST00000561643 CCAR2Q8N163 923 aaKnown RBP12.62□□□□□ -0.39
NEIL1-202ENST00000561643 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.62□□□□□ -0.39
NEIL1-202ENST00000561643 CNNM2Q9H8M5 875 aa12.62□□□□□ -0.39
NEIL1-202ENST00000561643 FAM217BQ9NTX9 383 aaPredicted RBP12.62□□□□□ -0.39
NEIL1-202ENST00000561643 ZNF215Q9UL58 517 aaPredicted RBP12.62□□□□□ -0.39
NEIL1-202ENST00000561643 DDX60Q8IY21 1712 aaKnown RBP12.62□□□□□ -0.39
NEIL1-202ENST00000561643 MYH3P11055 1940 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 LOC102724159A0A0B4J2E5 919 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 HNRNPH2P55795 449 aaKnown RBP12.61□□□□□ -0.39
NEIL1-202ENST00000561643 PWP2Q15269 919 aaKnown RBP12.61□□□□□ -0.39
NEIL1-202ENST00000561643 FBXO38Q6PIJ6 1188 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 CCDC150Q8NCX0 1101 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 NACAP1Q9BZK3 213 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 KRT23Q9C075 422 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 SEC31BQ9NQW1 1179 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 MYO5AQ9Y4I1 1855 aaKnown RBP12.61□□□□□ -0.39
NEIL1-202ENST00000561643 PRKAB2O43741 272 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 NRDCO43847 1150 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 TOM1O60784 492 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 SFPQP23246 707 aaKnown RBP eCLIP12.61□□□□□ -0.39
NEIL1-202ENST00000561643 PNOCQ13519 176 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 NCAPHQ15003 741 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 SART3Q15020 963 aaKnown RBP12.61□□□□□ -0.39
NEIL1-202ENST00000561643 SAFBQ15424 915 aaKnown RBP eCLIP12.61□□□□□ -0.39
NEIL1-202ENST00000561643 SUSD4Q5VX71 490 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms