RNA–Protein interactions for RNA: ENST00000557985.2

TMEM250-204, Transcript of transmembrane protein 250, humanhuman

TSL 1 (best)

Gene TMEM250, Length 1,981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM250-204ENST00000557985 MKRN1Q9UHC7 482 aaKnown RBP25.4■■□□□ 1.66
TMEM250-204ENST00000557985 CIAPIN1Q6FI81 312 aa25.39■■□□□ 1.66
TMEM250-204ENST00000557985 DHX32Q7L7V1 743 aaKnown RBP25.39■■□□□ 1.66
TMEM250-204ENST00000557985 GMLQ99445 158 aa25.39■■□□□ 1.66
TMEM250-204ENST00000557985 MRIQ9BWK5 157 aa25.39■■□□□ 1.66
TMEM250-204ENST00000557985 SAP30BPQ9UHR5 308 aaKnown RBP25.39■■□□□ 1.66
TMEM250-204ENST00000557985 YBX3P16989 372 aaKnown RBP eCLIP25.38■■□□□ 1.65
TMEM250-204ENST00000557985 CDC42EP5Q6NZY7 148 aa25.38■■□□□ 1.65
TMEM250-204ENST00000557985 NCOA7Q8NI08 942 aa25.38■■□□□ 1.65
TMEM250-204ENST00000557985 ZDHHC15Q96MV8 337 aa25.38■■□□□ 1.65
TMEM250-204ENST00000557985 CDK5RAP2Q96SN8 1893 aa25.38■■□□□ 1.65
TMEM250-204ENST00000557985 HMGB1P09429 215 aaKnown RBP25.38■■□□□ 1.65
TMEM250-204ENST00000557985 AKNAD1Q5T1N1 836 aa25.38■■□□□ 1.65
TMEM250-204ENST00000557985 CERS3Q8IU89 383 aa25.38■■□□□ 1.65
TMEM250-204ENST00000557985 SERPINA10Q9UK55 444 aa25.38■■□□□ 1.65
TMEM250-204ENST00000557985 HDLBPQ00341 1268 aaKnown RBP25.37■■□□□ 1.65
TMEM250-204ENST00000557985 EXOSC10Q01780 885 aaKnown RBP25.37■■□□□ 1.65
TMEM250-204ENST00000557985 TRDNQ13061 729 aa25.37■■□□□ 1.65
TMEM250-204ENST00000557985 PICALMQ13492 652 aa25.37■■□□□ 1.65
TMEM250-204ENST00000557985 MFSD6Q6ZSS7 791 aa25.37■■□□□ 1.65
TMEM250-204ENST00000557985 Q6ZUG5 572 aa25.37■■□□□ 1.65
TMEM250-204ENST00000557985 TMX3Q96JJ7 454 aa25.37■■□□□ 1.65
TMEM250-204ENST00000557985 NEDD4P46934 1319 aa25.37■■□□□ 1.65
TMEM250-204ENST00000557985 B4E1Z4 1266 aa25.36■■□□□ 1.65
TMEM250-204ENST00000557985 MCM2P49736 904 aa25.36■■□□□ 1.65
TMEM250-204ENST00000557985 CFAP100Q494V2 611 aa25.36■■□□□ 1.65
TMEM250-204ENST00000557985 RRP12Q5JTH9 1297 aaKnown RBP25.36■■□□□ 1.65
TMEM250-204ENST00000557985 RALYLQ86SE5 291 aaKnown RBP25.36■■□□□ 1.65
TMEM250-204ENST00000557985 TOMM22Q9NS69 142 aa25.36■■□□□ 1.65
TMEM250-204ENST00000557985 MYO3BQ8WXR4 1341 aa25.36■■□□□ 1.65
TMEM250-204ENST00000557985 CACNB3P54284 484 aa25.35■■□□□ 1.65
TMEM250-204ENST00000557985 TOB2Q14106 344 aaPredicted RBP25.35■■□□□ 1.65
TMEM250-204ENST00000557985 TNIP1Q15025 636 aa25.35■■□□□ 1.65
TMEM250-204ENST00000557985 MB21D2Q8IYB1 491 aaPredicted RBP25.35■■□□□ 1.65
TMEM250-204ENST00000557985 PRMT6Q96LA8 375 aaPredicted RBP25.35■■□□□ 1.65
TMEM250-204ENST00000557985 ANAPC4Q9UJX5 808 aa25.35■■□□□ 1.65
TMEM250-204ENST00000557985 LIMCH1Q9UPQ0 1083 aa25.35■■□□□ 1.65
TMEM250-204ENST00000557985 FLT1P17948 1338 aa25.35■■□□□ 1.65
TMEM250-204ENST00000557985 HSP90AA1P07900 732 aaKnown RBP25.35■■□□□ 1.65
TMEM250-204ENST00000557985 FGD1P98174 961 aa25.35■■□□□ 1.65
TMEM250-204ENST00000557985 OGFOD1Q8N543 542 aa25.35■■□□□ 1.65
TMEM250-204ENST00000557985 STAG1Q8WVM7 1258 aa25.35■■□□□ 1.65
TMEM250-204ENST00000557985 FZD9O00144 591 aa25.34■■□□□ 1.65
TMEM250-204ENST00000557985 WDHD1O75717 1129 aaPredicted RBP25.34■■□□□ 1.65
TMEM250-204ENST00000557985 SBK1Q52WX2 424 aa25.34■■□□□ 1.65
TMEM250-204ENST00000557985 CYB5R4Q7L1T6 521 aa25.34■■□□□ 1.65
TMEM250-204ENST00000557985 AGBL3Q8NEM8 1001 aa25.34■■□□□ 1.65
TMEM250-204ENST00000557985 SLKQ9H2G2 1235 aaPredicted RBP25.34■■□□□ 1.65
TMEM250-204ENST00000557985 DDX4Q9NQI0 724 aaKnown RBP25.34■■□□□ 1.65
TMEM250-204ENST00000557985 GPHNQ9NQX3 736 aaPredicted RBP25.34■■□□□ 1.65
TMEM250-204ENST00000557985 ARPP21Q9UBL0 812 aaPredicted RBP25.34■■□□□ 1.65
TMEM250-204ENST00000557985 GJA3Q9Y6H8 435 aa25.34■■□□□ 1.65
TMEM250-204ENST00000557985 PRDM1O75626 825 aa25.33■■□□□ 1.65
TMEM250-204ENST00000557985 POLR3DP05423 398 aaPredicted RBP25.33■■□□□ 1.65
TMEM250-204ENST00000557985 MCM5P33992 734 aa25.33■■□□□ 1.65
TMEM250-204ENST00000557985 PLCD1P51178 756 aa25.33■■□□□ 1.65
TMEM250-204ENST00000557985 EIF6P56537 245 aaKnown RBP25.33■■□□□ 1.65
TMEM250-204ENST00000557985 C12orf60Q5U649 245 aa25.33■■□□□ 1.65
TMEM250-204ENST00000557985 IL27Q8NEV9 243 aa25.33■■□□□ 1.65
TMEM250-204ENST00000557985 TDRD3Q9H7E2 651 aaKnown RBP25.33■■□□□ 1.65
TMEM250-204ENST00000557985 SHTN1A0MZ66 631 aa25.33■■□□□ 1.64
TMEM250-204ENST00000557985 PRC1O43663 620 aa25.33■■□□□ 1.64
TMEM250-204ENST00000557985 KDM4AO75164 1064 aa25.33■■□□□ 1.64
TMEM250-204ENST00000557985 LMNB1P20700 586 aa25.33■■□□□ 1.64
TMEM250-204ENST00000557985 ANTXR2P58335 489 aa25.33■■□□□ 1.64
TMEM250-204ENST00000557985 ALDH8A1Q9H2A2 487 aaPredicted RBP25.33■■□□□ 1.64
TMEM250-204ENST00000557985 ZSWIM5Q9P217 1185 aa25.33■■□□□ 1.64
TMEM250-204ENST00000557985 HDAC9Q9UKV0 1011 aa25.33■■□□□ 1.64
TMEM250-204ENST00000557985 TPCN1Q9ULQ1 816 aa25.33■■□□□ 1.64
TMEM250-204ENST00000557985 LARGE1O95461 756 aa25.32■■□□□ 1.64
TMEM250-204ENST00000557985 NFIAQ12857 509 aa25.32■■□□□ 1.64
TMEM250-204ENST00000557985 BRF1Q92994 677 aa25.32■■□□□ 1.64
TMEM250-204ENST00000557985 DYNLL2Q96FJ2 89 aa25.32■■□□□ 1.64
TMEM250-204ENST00000557985 RNF41Q9H4P4 317 aaPredicted RBP25.31■■□□□ 1.64
TMEM250-204ENST00000557985 MYH1P12882 1939 aa25.31■■□□□ 1.64
TMEM250-204ENST00000557985 SBF1O95248 1867 aa25.31■■□□□ 1.64
TMEM250-204ENST00000557985 SOCS7O14512 581 aa25.31■■□□□ 1.64
TMEM250-204ENST00000557985 KRT23Q9C075 422 aa25.31■■□□□ 1.64
TMEM250-204ENST00000557985 CNNM2Q9H8M5 875 aa25.31■■□□□ 1.64
TMEM250-204ENST00000557985 NAV1Q8NEY1 1877 aa25.3■■□□□ 1.64
TMEM250-204ENST00000557985 ANKRD1Q15327 319 aa25.3■■□□□ 1.64
TMEM250-204ENST00000557985 DLGAP5Q15398 846 aa25.3■■□□□ 1.64
TMEM250-204ENST00000557985 ZFPM1Q8IX07 1006 aa25.3■■□□□ 1.64
TMEM250-204ENST00000557985 ZNF541Q9H0D2 1346 aa25.3■■□□□ 1.64
TMEM250-204ENST00000557985 TCP10Q12799 353 aa25.29■■□□□ 1.64
TMEM250-204ENST00000557985 ME3Q16798 604 aa25.29■■□□□ 1.64
TMEM250-204ENST00000557985 AMOTL1Q8IY63 956 aa25.29■■□□□ 1.64
TMEM250-204ENST00000557985 ECM29Q5VYK3 1845 aa25.29■■□□□ 1.64
TMEM250-204ENST00000557985 APOBRQ0VD83 1088 aa25.29■■□□□ 1.64
TMEM250-204ENST00000557985 ZKSCAN3Q9BRR0 538 aa25.29■■□□□ 1.64
TMEM250-204ENST00000557985 FOCADQ5VW36 1801 aa25.28■■□□□ 1.64
TMEM250-204ENST00000557985 SLC3A2P08195 630 aaKnown RBP25.28■■□□□ 1.64
TMEM250-204ENST00000557985 GMPSP49915 693 aaPredicted RBP25.28■■□□□ 1.64
TMEM250-204ENST00000557985 NECAB1Q8N987 351 aa25.28■■□□□ 1.64
TMEM250-204ENST00000557985 TIAM2Q8IVF5 1701 aa25.28■■□□□ 1.64
TMEM250-204ENST00000557985 SPDYE2BA6NHP3 402 aa25.27■■□□□ 1.64
TMEM250-204ENST00000557985 RANBP6O60518 1105 aaKnown RBP25.27■■□□□ 1.64
TMEM250-204ENST00000557985 DTNBO60941 627 aa25.27■■□□□ 1.64
TMEM250-204ENST00000557985 SPDYE6P0CI01 402 aa25.27■■□□□ 1.64
TMEM250-204ENST00000557985 STK3Q13188 491 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms