RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 KIF4BQ2VIQ3 1234 aa6.44□□□□□ -1.38
CHD8-212ENST00000557329 PAOXQ6QHF9 649 aa6.44□□□□□ -1.38
CHD8-212ENST00000557329 ARMC10Q8N2F6 343 aa6.44□□□□□ -1.38
CHD8-212ENST00000557329 FMNL2Q96PY5 1086 aa6.44□□□□□ -1.38
CHD8-212ENST00000557329 NOC4LQ9BVI4 516 aaKnown RBP6.44□□□□□ -1.38
CHD8-212ENST00000557329 KCNF1Q9H3M0 494 aa6.44□□□□□ -1.38
CHD8-212ENST00000557329 PCMTD2Q9NV79 361 aa6.44□□□□□ -1.38
CHD8-212ENST00000557329 TTF2Q9UNY4 1162 aaKnown RBP6.44□□□□□ -1.38
CHD8-212ENST00000557329 TARBP1Q13395 1621 aaKnown RBP6.43□□□□□ -1.38
CHD8-212ENST00000557329 POLA1P09884 1462 aaPredicted RBP6.43□□□□□ -1.38
CHD8-212ENST00000557329 IGLV1-40P01703 118 aa6.43□□□□□ -1.38
CHD8-212ENST00000557329 FSTP19883 344 aa6.43□□□□□ -1.38
CHD8-212ENST00000557329 MAP4P27816 1152 aaKnown RBP6.43□□□□□ -1.38
CHD8-212ENST00000557329 ID3Q02535 119 aa6.43□□□□□ -1.38
CHD8-212ENST00000557329 RNF43Q68DV7 783 aa6.43□□□□□ -1.38
CHD8-212ENST00000557329 TPTE2Q6XPS3 522 aa6.43□□□□□ -1.38
CHD8-212ENST00000557329 BEND4Q6ZU67 534 aa6.43□□□□□ -1.38
CHD8-212ENST00000557329 EZH1Q92800 747 aaPredicted RBP6.43□□□□□ -1.38
CHD8-212ENST00000557329 CRELD1Q96HD1 420 aa6.43□□□□□ -1.38
CHD8-212ENST00000557329 DBNDD2Q9BQY9 259 aa6.43□□□□□ -1.38
CHD8-212ENST00000557329 METTL22Q9BUU2 404 aaPredicted RBP6.43□□□□□ -1.38
CHD8-212ENST00000557329 BCL2L13Q9BXK5 485 aa6.43□□□□□ -1.38
CHD8-212ENST00000557329 GSX1Q9H4S2 264 aaPredicted RBP6.43□□□□□ -1.38
CHD8-212ENST00000557329 PRDM2Q13029 1718 aa6.42□□□□□ -1.38
CHD8-212ENST00000557329 CCDC88BA6NC98 1476 aa6.42□□□□□ -1.38
CHD8-212ENST00000557329 LMTK3Q96Q04 1460 aa6.42□□□□□ -1.38
CHD8-212ENST00000557329 TOP2AP11388 1531 aaKnown RBP6.42□□□□□ -1.38
CHD8-212ENST00000557329 FAM95CA0A1B0GW59 222 aa6.42□□□□□ -1.38
CHD8-212ENST00000557329 RXRBP28702 533 aa6.42□□□□□ -1.38
CHD8-212ENST00000557329 CYP27A1Q02318 531 aa6.42□□□□□ -1.38
CHD8-212ENST00000557329 NFIAQ12857 509 aa6.42□□□□□ -1.38
CHD8-212ENST00000557329 PWP1Q13610 501 aa6.42□□□□□ -1.38
CHD8-212ENST00000557329 TAF1CQ15572 869 aaPredicted RBP6.42□□□□□ -1.38
CHD8-212ENST00000557329 AKAP4Q5JQC9 854 aa6.42□□□□□ -1.38
CHD8-212ENST00000557329 LLGL2Q6P1M3 1020 aa6.42□□□□□ -1.38
CHD8-212ENST00000557329 C2CD4AQ8NCU7 369 aaPredicted RBP6.42□□□□□ -1.38
CHD8-212ENST00000557329 KCNB2Q92953 911 aa6.42□□□□□ -1.38
CHD8-212ENST00000557329 WDR18Q9BV38 432 aa6.42□□□□□ -1.38
CHD8-212ENST00000557329 CBX8Q9HC52 389 aa6.42□□□□□ -1.38
CHD8-212ENST00000557329 TSPOAP1O95153 1857 aa6.42□□□□□ -1.38
CHD8-212ENST00000557329 SYNJ2O15056 1496 aa6.41□□□□□ -1.38
CHD8-212ENST00000557329 ERCC6L2Q5T890 1561 aa6.41□□□□□ -1.38
CHD8-212ENST00000557329 KDM6BO15054 1643 aa6.41□□□□□ -1.38
CHD8-212ENST00000557329 ENC1O14682 589 aa6.41□□□□□ -1.38
CHD8-212ENST00000557329 GRIK1P39086 918 aa6.41□□□□□ -1.38
CHD8-212ENST00000557329 ZNF157P51786 506 aaPredicted RBP6.41□□□□□ -1.38
CHD8-212ENST00000557329 ZNF252P-AS1Q0IIN9 211 aa6.41□□□□□ -1.38
CHD8-212ENST00000557329 INTS5Q6P9B9 1019 aaKnown RBP6.41□□□□□ -1.38
CHD8-212ENST00000557329 DYMQ7RTS9 669 aa6.41□□□□□ -1.38
CHD8-212ENST00000557329 PDZD3Q86UT5 571 aa6.41□□□□□ -1.38
CHD8-212ENST00000557329 KCT2Q8NC54 265 aa6.41□□□□□ -1.38
CHD8-212ENST00000557329 ACSBG1Q96GR2 724 aa6.41□□□□□ -1.38
CHD8-212ENST00000557329 C7orf69Q9H7B7 122 aa6.41□□□□□ -1.38
CHD8-212ENST00000557329 PIDD1Q9HB75 910 aa6.41□□□□□ -1.38
CHD8-212ENST00000557329 AP4E1Q9UPM8 1137 aa6.41□□□□□ -1.38
CHD8-212ENST00000557329 GRIN2BQ13224 1484 aa6.41□□□□□ -1.38
CHD8-212ENST00000557329 DLGAP3O95886 979 aa6.4□□□□□ -1.38
CHD8-212ENST00000557329 ASPAP45381 313 aa6.4□□□□□ -1.38
CHD8-212ENST00000557329 MFAP1P55081 439 aaKnown RBP6.4□□□□□ -1.38
CHD8-212ENST00000557329 ERVK-24P63145 666 aa6.4□□□□□ -1.38
CHD8-212ENST00000557329 CCDC85BQ15834 202 aaPredicted RBP6.4□□□□□ -1.38
CHD8-212ENST00000557329 SETDB2Q96T68 719 aa6.4□□□□□ -1.38
CHD8-212ENST00000557329 CCDC86Q9H6F5 360 aaKnown RBP6.4□□□□□ -1.38
CHD8-212ENST00000557329 CACNA2D2Q9NY47 1150 aa6.4□□□□□ -1.38
CHD8-212ENST00000557329 CRIM1Q9NZV1 1036 aa6.4□□□□□ -1.38
CHD8-212ENST00000557329 KIF13AQ9H1H9 1805 aa6.4□□□□□ -1.38
CHD8-212ENST00000557329 USP31Q70CQ4 1352 aa6.4□□□□□ -1.39
CHD8-212ENST00000557329 MAGI1Q96QZ7 1491 aaPredicted RBP6.4□□□□□ -1.39
CHD8-212ENST00000557329 YBX3P16989 372 aaKnown RBP eCLIP6.39□□□□□ -1.396e-6■□□□□ 10.9
CHD8-212ENST00000557329 BMP6P22004 513 aa6.39□□□□□ -1.39
CHD8-212ENST00000557329 CD97P48960 835 aa6.39□□□□□ -1.39
CHD8-212ENST00000557329 PCNX4Q63HM2 1172 aa6.39□□□□□ -1.39
CHD8-212ENST00000557329 MAP1SQ66K74 1059 aaPredicted RBP6.39□□□□□ -1.39
CHD8-212ENST00000557329 CCDC84Q86UT8 332 aaPredicted RBP6.39□□□□□ -1.39
CHD8-212ENST00000557329 ATG3Q9NT62 314 aa6.39□□□□□ -1.39
CHD8-212ENST00000557329 VTI1BQ9UEU0 232 aa6.39□□□□□ -1.39
CHD8-212ENST00000557329 ACTL7BQ9Y614 415 aa6.39□□□□□ -1.39
CHD8-212ENST00000557329 TACC3Q9Y6A5 838 aa6.39□□□□□ -1.39
CHD8-212ENST00000557329 HECW2Q9P2P5 1572 aa6.39□□□□□ -1.39
CHD8-212ENST00000557329 TMPRSS2O15393 492 aa6.38□□□□□ -1.39
CHD8-212ENST00000557329 DRD2P14416 443 aa6.38□□□□□ -1.39
CHD8-212ENST00000557329 LIG1P18858 919 aa6.38□□□□□ -1.39
CHD8-212ENST00000557329 NFKBIBQ15653 356 aa6.38□□□□□ -1.39
CHD8-212ENST00000557329 TTBK2Q6IQ55 1244 aa6.38□□□□□ -1.39
CHD8-212ENST00000557329 TRIM42Q8IWZ5 723 aa6.38□□□□□ -1.39
CHD8-212ENST00000557329 RNF214Q8ND24 703 aa6.38□□□□□ -1.39
CHD8-212ENST00000557329 ACSS3Q9H6R3 686 aa6.38□□□□□ -1.39
CHD8-212ENST00000557329 PCOLCE2Q9UKZ9 415 aa6.38□□□□□ -1.39
CHD8-212ENST00000557329 SNCAIPQ9Y6H5 919 aa6.38□□□□□ -1.39
CHD8-212ENST00000557329 DISP3Q9P2K9 1392 aa6.38□□□□□ -1.39
CHD8-212ENST00000557329 ADGRL1O94910 1474 aa6.37□□□□□ -1.39
CHD8-212ENST00000557329 FGD5Q6ZNL6 1462 aa6.37□□□□□ -1.39
CHD8-212ENST00000557329 FANCGO15287 622 aa6.37□□□□□ -1.39
CHD8-212ENST00000557329 ZNF862O60290 1169 aa6.37□□□□□ -1.39
CHD8-212ENST00000557329 CTSBP07858 339 aa6.37□□□□□ -1.39
CHD8-212ENST00000557329 SSTR4P31391 388 aa6.37□□□□□ -1.39
CHD8-212ENST00000557329 IRAK1P51617 712 aa6.37□□□□□ -1.39
CHD8-212ENST00000557329 SGO2Q562F6 1265 aa6.37□□□□□ -1.39
CHD8-212ENST00000557329 ZC3H12AQ5D1E8 599 aaKnown RBP6.37□□□□□ -1.39
CHD8-212ENST00000557329 HDXQ7Z353 690 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms