RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 KIF2CQ99661 725 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 MRIQ9BWK5 157 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 UPF3BQ9BZI7 483 aaKnown RBP10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 TOMM22Q9NS69 142 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 CLRN2A0PK11 232 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 POLR3DP05423 398 aaPredicted RBP10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 CPA1P15085 419 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 RPS12P25398 132 aaKnown RBP10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 TCP10Q12799 353 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 SAMD7Q7Z3H4 446 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 AMOTL1Q8IY63 956 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 NAV1Q8NEY1 1877 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 MYOZ2Q9NPC6 264 aa10.37□□□□□ -0.75
AC055716.2-201ENST00000552545 H7C1D1 291 aa10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 NEK4P51957 841 aa10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 ANAPC15P60006 121 aa10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 PPARAQ07869 468 aa10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 ALX1Q15699 326 aa10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 TBC1D10BQ4KMP7 808 aaPredicted RBP10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 DPY19L2Q6NUT2 758 aa10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 CTR9Q6PD62 1173 aa10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 GPC2Q8N158 579 aa10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 VEZTQ9HBM0 779 aa10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 INCENPQ9NQS7 918 aa10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 RPAP1Q9BWH6 1393 aaPredicted RBP10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 E7EWF7 191 aa10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 MYO1BO43795 1136 aa10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 CYP2D6P10635 497 aa10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 RRP12Q5JTH9 1297 aaKnown RBP10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 NOL8Q76FK4 1167 aaKnown RBP10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 TMOD2Q9NZR1 351 aa10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 FLT1P17948 1338 aa10.36□□□□□ -0.75
AC055716.2-201ENST00000552545 LAMA4Q16363 1823 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 SPDYE2BA6NHP3 402 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 TCP10L2B9ZVM9 353 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 SMIM22K7EJ46 135 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 SPDYE6P0CI01 402 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 PSMA5P28066 241 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 EVX2Q03828 476 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 NFIAQ12857 509 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 KRT32Q14532 448 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 RABEP1Q15276 862 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 NBPF9Q3BBW0 867 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 GIMAP6Q6P9H5 292 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 ZSCAN29Q8IWY8 852 aaPredicted RBP10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 DPF2Q92785 391 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 TCEANC2Q96MN5 208 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 NEK1Q96PY6 1258 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 DDX4Q9NQI0 724 aaKnown RBP10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 FOCADQ5VW36 1801 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 WDHD1O75717 1129 aaPredicted RBP10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 EGFRP00533 1210 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 LMOD1P29536 600 aaPredicted RBP10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 TRDNQ13061 729 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 BLOC1S2Q6QNY1 142 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 MFSD6Q6ZSS7 791 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 STOX1Q6ZVD7 989 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 TBC1D10CQ8IV04 446 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 KCNB2Q92953 911 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 ARPP21Q9UBL0 812 aaPredicted RBP10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 SCAF8Q9UPN6 1271 aaKnown RBP10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 CYP46A1Q9Y6A2 500 aa10.35□□□□□ -0.75
AC055716.2-201ENST00000552545 EPS15P42566 896 aa10.34□□□□□ -0.75
AC055716.2-201ENST00000552545 CHST3Q7LGC8 479 aa10.34□□□□□ -0.75
AC055716.2-201ENST00000552545 RALYLQ86SE5 291 aaKnown RBP10.34□□□□□ -0.75
AC055716.2-201ENST00000552545 ZNF70Q9UC06 446 aaPredicted RBP10.34□□□□□ -0.75
AC055716.2-201ENST00000552545 LAMB1P07942 1786 aa10.34□□□□□ -0.75
AC055716.2-201ENST00000552545 WNT10BO00744 389 aa10.34□□□□□ -0.75
AC055716.2-201ENST00000552545 ST18O60284 1047 aa10.34□□□□□ -0.75
AC055716.2-201ENST00000552545 SLC3A2P08195 630 aaKnown RBP10.34□□□□□ -0.75
AC055716.2-201ENST00000552545 KIF4BQ2VIQ3 1234 aa10.34□□□□□ -0.75
AC055716.2-201ENST00000552545 NCOA7Q8NI08 942 aa10.34□□□□□ -0.75
AC055716.2-201ENST00000552545 LARP6Q9BRS8 491 aaKnown RBP10.34□□□□□ -0.75
AC055716.2-201ENST00000552545 NBPF3Q9H094 633 aa10.34□□□□□ -0.75
AC055716.2-201ENST00000552545 GPRC5DQ9NZD1 345 aa10.34□□□□□ -0.75
AC055716.2-201ENST00000552545 ZMYM6O95789 1325 aa10.34□□□□□ -0.75
AC055716.2-201ENST00000552545 PRDM1O75626 825 aa10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 PLCD1P51178 756 aa10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 ZNF280AP59817 542 aaPredicted RBP10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 COL9A3Q14050 684 aaPredicted RBP10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 TSGA10IPQ3SY00 556 aa10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 AKNAD1Q5T1N1 836 aa10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 RUFY3Q7L099 469 aa10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 ZFPM1Q8IX07 1006 aa10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 DYNLL2Q96FJ2 89 aa10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 LRRC2Q9BYS8 371 aa10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 PDRG1Q9NUG6 133 aa10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 MKRN1Q9UHC7 482 aaKnown RBP10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 B4E1Z4 1266 aa10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 C12orf60Q5U649 245 aa10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 OSBPL5Q9H0X9 879 aaPredicted RBP10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 ZSWIM6Q9HCJ5 1215 aa10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 FAM198AQ9UFP1 575 aa10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 NEDD4P46934 1319 aa10.33□□□□□ -0.76
AC055716.2-201ENST00000552545 RANBP6O60518 1105 aaKnown RBP10.32□□□□□ -0.76
AC055716.2-201ENST00000552545 SLC4A3P48751 1232 aa10.32□□□□□ -0.76
AC055716.2-201ENST00000552545 SPDYE2Q495Y8 402 aa10.32□□□□□ -0.76
AC055716.2-201ENST00000552545 SBK1Q52WX2 424 aa10.32□□□□□ -0.76
AC055716.2-201ENST00000552545 HSCBQ8IWL3 235 aa10.32□□□□□ -0.76
AC055716.2-201ENST00000552545 MTMR14Q8NCE2 650 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms