RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	CRAMP1	Q96RY5	1269 aa		13.47	□□□□□ -0.25
RAB5C-208	ENST00000551338	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.47	□□□□□ -0.25
RAB5C-208	ENST00000551338	RNF41	Q9H4P4	317 aa	Predicted RBP	13.47	□□□□□ -0.25
RAB5C-208	ENST00000551338	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.47	□□□□□ -0.25
RAB5C-208	ENST00000551338	JAG2	Q9Y219	1238 aa		13.47	□□□□□ -0.25
RAB5C-208	ENST00000551338	CYP2D7	A0A087X1C5	515 aa		13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	MINDY4B	A8MYZ0	360 aa		13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	CPLX1	O14810	134 aa		13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	ZBTB43	O43298	467 aa		13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	IGSF3	O75054	1194 aa		13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	HMGB2	P26583	209 aa	Known RBP	13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	NTRK3	Q16288	839 aa		13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	OTUD7B	Q6GQQ9	843 aa		13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	NFXL1	Q6ZNB6	911 aa		13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	ZNF804A	Q7Z570	1209 aa		13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	MICU3	Q86XE3	530 aa		13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	COL23A1	Q86Y22	540 aa	Predicted RBP	13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	WDR66	Q8TBY9	1149 aa		13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	PGBD1	Q96JS3	809 aa		13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	C8orf76	Q96K31	380 aa		13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	TSPY26P	Q9H489	355 aa		13.46	□□□□□ -0.25
RAB5C-208	ENST00000551338	STK36	Q9NRP7	1315 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	CCDC69	A6NI79	296 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	UFL1	O94874	794 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	FGR	P09769	529 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	LIG1	P18858	919 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	WTAP	Q15007	396 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	SEC23A	Q15436	765 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	GRIK5	Q16478	980 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	CTR9	Q6PD62	1173 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	STK11IP	Q8N1F8	1099 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	RGS22	Q8NE09	1264 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	USP28	Q96RU2	1077 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	ZKSCAN3	Q9BRR0	538 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	MYL10	Q9BUA6	226 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	TOMM22	Q9NS69	142 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	PODXL2	Q9NZ53	605 aa		13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
RAB5C-208	ENST00000551338	RANBP6	O60518	1105 aa	Known RBP	13.44	□□□□□ -0.26
RAB5C-208	ENST00000551338	BBOX1	O75936	387 aa		13.44	□□□□□ -0.26
RAB5C-208	ENST00000551338	CDKL5	O76039	1030 aa		13.44	□□□□□ -0.26
RAB5C-208	ENST00000551338	APBA3	O96018	575 aa		13.44	□□□□□ -0.26
RAB5C-208	ENST00000551338	EVX2	Q03828	476 aa		13.44	□□□□□ -0.26
RAB5C-208	ENST00000551338	DZIP1	Q86YF9	867 aa	Known RBP	13.44	□□□□□ -0.26
RAB5C-208	ENST00000551338	CCDC144CP	Q8IYA2	1237 aa		13.44	□□□□□ -0.26
RAB5C-208	ENST00000551338	FBXO18	Q8NFZ0	1043 aa		13.44	□□□□□ -0.26
RAB5C-208	ENST00000551338	ZNF396	Q96N95	335 aa	Predicted RBP	13.44	□□□□□ -0.26
RAB5C-208	ENST00000551338	FUCA2	Q9BTY2	467 aa		13.44	□□□□□ -0.26
RAB5C-208	ENST00000551338	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
RAB5C-208	ENST00000551338	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.44	□□□□□ -0.26
RAB5C-208	ENST00000551338	GJB4	Q9NTQ9	266 aa		13.44	□□□□□ -0.26
RAB5C-208	ENST00000551338	GGA1	Q9UJY5	639 aa		13.44	□□□□□ -0.26
RAB5C-208	ENST00000551338	SLX4	Q8IY92	1834 aa		13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	KIF28P	B7ZC32	967 aa		13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	LETM1	O95202	739 aa	Predicted RBP	13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	LDHB	P07195	334 aa	Known RBP	13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	RCAN1	P53805	252 aa		13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	SBK1	Q52WX2	424 aa		13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	ATL3	Q6DD88	541 aa		13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	CPLX2	Q6PUV4	134 aa	Known RBP	13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	ESR2	Q92731	530 aa		13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	AIFM3	Q96NN9	605 aa		13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	PPP1R9B	Q96SB3	815 aa		13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	ALG1	Q9BT22	464 aa		13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	CD209	Q9NNX6	404 aa		13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	RCOR1	Q9UKL0	485 aa		13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	CFAP45	Q9UL16	551 aa		13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	SLC12A7	Q9Y666	1083 aa		13.43	□□□□□ -0.26
RAB5C-208	ENST00000551338	TNKS	O95271	1327 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	PSME4	Q14997	1843 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	USP17L12	C9JPN9	530 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	USP17L21	D6R901	530 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	PPEF1	O14829	653 aa	Predicted RBP	13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	CYP2D6	P10635	497 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	PC	P11498	1178 aa	Known RBP	13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	IL1R1	P14778	569 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	KIF23	Q02241	960 aa	Predicted RBP	13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	SART3	Q15020	963 aa	Known RBP	13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	RTN1	Q16799	776 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	TMC4	Q7Z404	712 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	ZNF654	Q8IZM8	581 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	KLHL34	Q8N239	644 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	NLGN1	Q8N2Q7	840 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	TBC1D16	Q8TBP0	767 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	PHKB	Q93100	1093 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	ATP8A2	Q9NTI2	1148 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	POLL	Q9UGP5	575 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	ROBO3	Q96MS0	1386 aa		13.42	□□□□□ -0.26
RAB5C-208	ENST00000551338	MROH7-TTC4	A0A0A0MT08	1334 aa		13.41	□□□□□ -0.26
RAB5C-208	ENST00000551338	ERICH2	A1L162	156 aa		13.41	□□□□□ -0.26
RAB5C-208	ENST00000551338	ORC4	O43929	436 aa		13.41	□□□□□ -0.26
RAB5C-208	ENST00000551338	FMNL1	O95466	1100 aa	Predicted RBP	13.41	□□□□□ -0.26
RAB5C-208	ENST00000551338	IFNAR1	P17181	557 aa		13.41	□□□□□ -0.26
RAB5C-208	ENST00000551338	IARS	P41252	1262 aa	Known RBP	13.41	□□□□□ -0.26
RAB5C-208	ENST00000551338	CEBPZ	Q03701	1054 aa	Known RBP	13.41	□□□□□ -0.26
RAB5C-208	ENST00000551338	CCDC173	Q0VFZ6	552 aa		13.41	□□□□□ -0.26

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