RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 USP17L12C9JPN9 530 aa19.16■□□□□ 0.66
TRAF3-204ENST00000539721 USP17L21D6R901 530 aa19.16■□□□□ 0.66
TRAF3-204ENST00000539721 CDC42EP5Q6NZY7 148 aa19.16■□□□□ 0.66
TRAF3-204ENST00000539721 MKRN1Q9UHC7 482 aaKnown RBP19.16■□□□□ 0.66
TRAF3-204ENST00000539721 GJA3Q9Y6H8 435 aa19.16■□□□□ 0.66
TRAF3-204ENST00000539721 ZNF541Q9H0D2 1346 aa19.16■□□□□ 0.66
TRAF3-204ENST00000539721 HMGB1P09429 215 aaKnown RBP19.16■□□□□ 0.66
TRAF3-204ENST00000539721 RPS6KB1P23443 525 aa19.16■□□□□ 0.66
TRAF3-204ENST00000539721 RPS12P25398 132 aaKnown RBP19.16■□□□□ 0.66
TRAF3-204ENST00000539721 PDRG1Q9NUG6 133 aa19.16■□□□□ 0.66
TRAF3-204ENST00000539721 FLT1P17948 1338 aa19.15■□□□□ 0.66
TRAF3-204ENST00000539721 CYP2D7A0A087X1C5 515 aa19.15■□□□□ 0.66
TRAF3-204ENST00000539721 TRDNQ13061 729 aa19.15■□□□□ 0.66
TRAF3-204ENST00000539721 SBK1Q52WX2 424 aa19.15■□□□□ 0.66
TRAF3-204ENST00000539721 RALYLQ86SE5 291 aaKnown RBP19.15■□□□□ 0.66
TRAF3-204ENST00000539721 AMOTL1Q8IY63 956 aa19.15■□□□□ 0.66
TRAF3-204ENST00000539721 NCOA7Q8NI08 942 aa19.15■□□□□ 0.66
TRAF3-204ENST00000539721 RNF181Q9P0P0 153 aa19.15■□□□□ 0.66
TRAF3-204ENST00000539721 ANAPC4Q9UJX5 808 aa19.15■□□□□ 0.66
TRAF3-204ENST00000539721 PICALMQ13492 652 aa19.14■□□□□ 0.66
TRAF3-204ENST00000539721 COL9A3Q14050 684 aaPredicted RBP19.14■□□□□ 0.66
TRAF3-204ENST00000539721 AKNAD1Q5T1N1 836 aa19.14■□□□□ 0.66
TRAF3-204ENST00000539721 TTC14Q96N46 770 aa19.14■□□□□ 0.66
TRAF3-204ENST00000539721 WDHD1O75717 1129 aaPredicted RBP19.14■□□□□ 0.65
TRAF3-204ENST00000539721 CYP2D6P10635 497 aa19.14■□□□□ 0.65
TRAF3-204ENST00000539721 DLGAP5Q15398 846 aa19.14■□□□□ 0.65
TRAF3-204ENST00000539721 MFSD6Q6ZSS7 791 aa19.14■□□□□ 0.65
TRAF3-204ENST00000539721 STK11IPQ8N1F8 1099 aa19.14■□□□□ 0.65
TRAF3-204ENST00000539721 STAG1Q8WVM7 1258 aa19.14■□□□□ 0.65
TRAF3-204ENST00000539721 RNF41Q9H4P4 317 aaPredicted RBP19.14■□□□□ 0.65
TRAF3-204ENST00000539721 SAP30BPQ9UHR5 308 aaKnown RBP19.14■□□□□ 0.65
TRAF3-204ENST00000539721 K7ELQ4 463 aaPredicted RBP19.13■□□□□ 0.65
TRAF3-204ENST00000539721 POLR3DP05423 398 aaPredicted RBP19.13■□□□□ 0.65
TRAF3-204ENST00000539721 SLC4A3P48751 1232 aa19.13■□□□□ 0.65
TRAF3-204ENST00000539721 MCM2P49736 904 aa19.13■□□□□ 0.65
TRAF3-204ENST00000539721 GMPSP49915 693 aaPredicted RBP19.13■□□□□ 0.65
TRAF3-204ENST00000539721 SLC4A8Q2Y0W8 1093 aa19.13■□□□□ 0.65
TRAF3-204ENST00000539721 PRMT6Q96LA8 375 aaPredicted RBP19.13■□□□□ 0.65
TRAF3-204ENST00000539721 TCEANC2Q96MN5 208 aa19.13■□□□□ 0.65
TRAF3-204ENST00000539721 NEDD4P46934 1319 aa19.13■□□□□ 0.65
TRAF3-204ENST00000539721 SPDYE2BA6NHP3 402 aa19.12■□□□□ 0.65
TRAF3-204ENST00000539721 SLC3A2P08195 630 aaKnown RBP19.12■□□□□ 0.65
TRAF3-204ENST00000539721 SPDYE6P0CI01 402 aa19.12■□□□□ 0.65
TRAF3-204ENST00000539721 MMP14P50281 582 aa19.12■□□□□ 0.65
TRAF3-204ENST00000539721 AK2P54819 239 aa19.12■□□□□ 0.65
TRAF3-204ENST00000539721 C12orf60Q5U649 245 aa19.12■□□□□ 0.65
TRAF3-204ENST00000539721 NOL8Q76FK4 1167 aaKnown RBP19.12■□□□□ 0.65
TRAF3-204ENST00000539721 DHX32Q7L7V1 743 aaKnown RBP19.12■□□□□ 0.65
TRAF3-204ENST00000539721 TDRD3Q9H7E2 651 aaKnown RBP19.12■□□□□ 0.65
TRAF3-204ENST00000539721 CNNM2Q9H8M5 875 aa19.12■□□□□ 0.65
TRAF3-204ENST00000539721 TOMM22Q9NS69 142 aa19.12■□□□□ 0.65
TRAF3-204ENST00000539721 SMIM22K7EJ46 135 aa19.11■□□□□ 0.65
TRAF3-204ENST00000539721 C9orf131Q5VYM1 1079 aa19.11■□□□□ 0.65
TRAF3-204ENST00000539721 MB21D2Q8IYB1 491 aaPredicted RBP19.11■□□□□ 0.65
TRAF3-204ENST00000539721 MTMR14Q8NCE2 650 aa19.11■□□□□ 0.65
TRAF3-204ENST00000539721 DPF2Q92785 391 aa19.11■□□□□ 0.65
TRAF3-204ENST00000539721 KRT23Q9C075 422 aa19.11■□□□□ 0.65
TRAF3-204ENST00000539721 DDX4Q9NQI0 724 aaKnown RBP19.11■□□□□ 0.65
TRAF3-204ENST00000539721 INCENPQ9NQS7 918 aa19.11■□□□□ 0.65
TRAF3-204ENST00000539721 TACC3Q9Y6A5 838 aa19.11■□□□□ 0.65
TRAF3-204ENST00000539721 GRIN3BO60391 1043 aa19.11■□□□□ 0.65
TRAF3-204ENST00000539721 CACNB3P54284 484 aa19.11■□□□□ 0.65
TRAF3-204ENST00000539721 EVX2Q03828 476 aa19.11■□□□□ 0.65
TRAF3-204ENST00000539721 MYOZ2Q9NPC6 264 aa19.11■□□□□ 0.65
TRAF3-204ENST00000539721 SHTN1A0MZ66 631 aa19.1■□□□□ 0.65
TRAF3-204ENST00000539721 B4E1Z4 1266 aa19.1■□□□□ 0.65
TRAF3-204ENST00000539721 MCM5P33992 734 aa19.1■□□□□ 0.65
TRAF3-204ENST00000539721 ZNF280AP59817 542 aaPredicted RBP19.1■□□□□ 0.65
TRAF3-204ENST00000539721 EXOSC10Q01780 885 aaKnown RBP19.1■□□□□ 0.65
TRAF3-204ENST00000539721 NFIAQ12857 509 aa19.1■□□□□ 0.65
TRAF3-204ENST00000539721 RRP12Q5JTH9 1297 aaKnown RBP19.1■□□□□ 0.65
TRAF3-204ENST00000539721 MICALL2Q8IY33 904 aa19.1■□□□□ 0.65
TRAF3-204ENST00000539721 GPC2Q8N158 579 aa19.1■□□□□ 0.65
TRAF3-204ENST00000539721 IDI2Q9BXS1 227 aa19.1■□□□□ 0.65
TRAF3-204ENST00000539721 OSBPL5Q9H0X9 879 aaPredicted RBP19.1■□□□□ 0.65
TRAF3-204ENST00000539721 ALDH8A1Q9H2A2 487 aaPredicted RBP19.1■□□□□ 0.65
TRAF3-204ENST00000539721 TMOD2Q9NZR1 351 aa19.1■□□□□ 0.65
TRAF3-204ENST00000539721 ROBO3Q96MS0 1386 aa19.1■□□□□ 0.65
TRAF3-204ENST00000539721 PCP11498 1178 aaKnown RBP19.09■□□□□ 0.65
TRAF3-204ENST00000539721 FGD1P98174 961 aa19.09■□□□□ 0.65
TRAF3-204ENST00000539721 ANKRD1Q15327 319 aa19.09■□□□□ 0.65
TRAF3-204ENST00000539721 Q6ZUG5 572 aa19.09■□□□□ 0.65
TRAF3-204ENST00000539721 CHST3Q7LGC8 479 aa19.09■□□□□ 0.65
TRAF3-204ENST00000539721 LRRC2Q9BYS8 371 aa19.09■□□□□ 0.65
TRAF3-204ENST00000539721 CNOT7Q9UIV1 285 aaKnown RBP19.09■□□□□ 0.65
TRAF3-204ENST00000539721 PRC1O43663 620 aa19.09■□□□□ 0.65
TRAF3-204ENST00000539721 PDE4BQ07343 736 aa19.09■□□□□ 0.65
TRAF3-204ENST00000539721 KDM4AO75164 1064 aa19.08■□□□□ 0.64
TRAF3-204ENST00000539721 PLCD1P51178 756 aa19.08■□□□□ 0.64
TRAF3-204ENST00000539721 TTC6Q86TZ1 520 aa19.08■□□□□ 0.64
TRAF3-204ENST00000539721 ZBED3Q96IU2 234 aaPredicted RBP19.08■□□□□ 0.64
TRAF3-204ENST00000539721 ZNF70Q9UC06 446 aaPredicted RBP19.08■□□□□ 0.64
TRAF3-204ENST00000539721 FAM198AQ9UFP1 575 aa19.08■□□□□ 0.64
TRAF3-204ENST00000539721 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.08■□□□□ 0.64
TRAF3-204ENST00000539721 WDR19Q8NEZ3 1342 aa19.08■□□□□ 0.64
TRAF3-204ENST00000539721 CLRN2A0PK11 232 aa19.07■□□□□ 0.64
TRAF3-204ENST00000539721 MYO1BO43795 1136 aa19.07■□□□□ 0.64
TRAF3-204ENST00000539721 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
TRAF3-204ENST00000539721 FGRP09769 529 aa19.07■□□□□ 0.64
TRAF3-204ENST00000539721 ANTXR2P58335 489 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms