RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, human

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-222	ENST00000533733	VPS37D	Q86XT2	251 aa		13.86	□□□□□ -0.19
ATM-222	ENST00000533733	ANKRD18A	Q8IVF6	992 aa		13.86	□□□□□ -0.19
ATM-222	ENST00000533733	MYRIP	Q8NFW9	859 aa		13.86	□□□□□ -0.19
ATM-222	ENST00000533733	HELB	Q8NG08	1087 aa	Predicted RBP	13.86	□□□□□ -0.19
ATM-222	ENST00000533733	NYX	Q9GZU5	481 aa		13.86	□□□□□ -0.19
ATM-222	ENST00000533733	BSDC1	Q9NW68	430 aa	Predicted RBP	13.86	□□□□□ -0.19
ATM-222	ENST00000533733	LRP2BP	Q9P2M1	347 aa		13.86	□□□□□ -0.19
ATM-222	ENST00000533733	DENND2A	Q9ULE3	1009 aa		13.86	□□□□□ -0.19
ATM-222	ENST00000533733	SLC4A4	Q9Y6R1	1079 aa		13.86	□□□□□ -0.19
ATM-222	ENST00000533733	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.86	□□□□□ -0.19
ATM-222	ENST00000533733	LAMB1	P07942	1786 aa		13.86	□□□□□ -0.19
ATM-222	ENST00000533733	CACNA1S	Q13698	1873 aa		13.85	□□□□□ -0.19
ATM-222	ENST00000533733	SMTNL1	A8MU46	457 aa		13.85	□□□□□ -0.19
ATM-222	ENST00000533733	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
ATM-222	ENST00000533733	ITPK1	Q13572	414 aa		13.85	□□□□□ -0.19
ATM-222	ENST00000533733	SLC10A5	Q5PT55	438 aa		13.85	□□□□□ -0.19
ATM-222	ENST00000533733	FBXO41	Q8TF61	875 aa		13.85	□□□□□ -0.19
ATM-222	ENST00000533733	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
ATM-222	ENST00000533733	KCNF1	Q9H3M0	494 aa		13.85	□□□□□ -0.19
ATM-222	ENST00000533733	SEC31B	Q9NQW1	1179 aa		13.85	□□□□□ -0.19
ATM-222	ENST00000533733	CLIP2	Q9UDT6	1046 aa		13.85	□□□□□ -0.19
ATM-222	ENST00000533733	CLIC4	Q9Y696	253 aa		13.85	□□□□□ -0.19
ATM-222	ENST00000533733	CUTA	O60888	179 aa		13.84	□□□□□ -0.19
ATM-222	ENST00000533733	POLR3D	P05423	398 aa	Predicted RBP	13.84	□□□□□ -0.19
ATM-222	ENST00000533733	SLC3A2	P08195	630 aa	Known RBP	13.84	□□□□□ -0.19
ATM-222	ENST00000533733	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.84	□□□□□ -0.19
ATM-222	ENST00000533733	WTAP	Q15007	396 aa		13.84	□□□□□ -0.19
ATM-222	ENST00000533733	CAVIN4	Q5BKX8	364 aa		13.84	□□□□□ -0.19
ATM-222	ENST00000533733	RC3H1	Q5TC82	1133 aa	Known RBP	13.84	□□□□□ -0.19
ATM-222	ENST00000533733	MICU3	Q86XE3	530 aa		13.84	□□□□□ -0.19
ATM-222	ENST00000533733	SPC24	Q8NBT2	197 aa		13.84	□□□□□ -0.19
ATM-222	ENST00000533733	ZNF830	Q96NB3	372 aa	Predicted RBP	13.84	□□□□□ -0.19
ATM-222	ENST00000533733	ARMT1	Q9H993	441 aa		13.84	□□□□□ -0.19
ATM-222	ENST00000533733	ZSWIM5	Q9P217	1185 aa		13.84	□□□□□ -0.19
ATM-222	ENST00000533733	HOOK1	Q9UJC3	728 aa	Known RBP	13.84	□□□□□ -0.19
ATM-222	ENST00000533733	DEXI	O95424	95 aa		13.84	□□□□□ -0.19
ATM-222	ENST00000533733	NDUFA8	P51970	172 aa		13.84	□□□□□ -0.19
ATM-222	ENST00000533733	GSDMD	P57764	484 aa		13.84	□□□□□ -0.19
ATM-222	ENST00000533733	NLRP12	P59046	1061 aa		13.84	□□□□□ -0.19
ATM-222	ENST00000533733	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.84	□□□□□ -0.19
ATM-222	ENST00000533733	CCDC186	Q7Z3E2	898 aa		13.84	□□□□□ -0.19
ATM-222	ENST00000533733	ESR2	Q92731	530 aa		13.84	□□□□□ -0.19
ATM-222	ENST00000533733	IMPACT	Q9P2X3	320 aa		13.84	□□□□□ -0.19
ATM-222	ENST00000533733		A0A1B0GVL5	298 aa		13.83	□□□□□ -0.2
ATM-222	ENST00000533733	KIF28P	B7ZC32	967 aa		13.83	□□□□□ -0.2
ATM-222	ENST00000533733	ZNF202	O95125	648 aa		13.83	□□□□□ -0.2
ATM-222	ENST00000533733	XBP1	P17861	261 aa		13.83	□□□□□ -0.2
ATM-222	ENST00000533733	CDC27	P30260	824 aa		13.83	□□□□□ -0.2
ATM-222	ENST00000533733	BCAM	P50895	628 aa		13.83	□□□□□ -0.2
ATM-222	ENST00000533733	RTN1	Q16799	776 aa		13.83	□□□□□ -0.2
ATM-222	ENST00000533733	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.83	□□□□□ -0.2
ATM-222	ENST00000533733	DHX40	Q8IX18	779 aa	Known RBP	13.83	□□□□□ -0.2
ATM-222	ENST00000533733	ACSBG1	Q96GR2	724 aa		13.83	□□□□□ -0.2
ATM-222	ENST00000533733	BRIP1	Q9BX63	1249 aa		13.83	□□□□□ -0.2
ATM-222	ENST00000533733	PDCL3	Q9H2J4	239 aa		13.83	□□□□□ -0.2
ATM-222	ENST00000533733	FOXP1	Q9H334	677 aa	Predicted RBP	13.83	□□□□□ -0.2
ATM-222	ENST00000533733	CEP131	Q9UPN4	1083 aa		13.83	□□□□□ -0.2
ATM-222	ENST00000533733	DUOX1	Q9NRD9	1551 aa		13.83	□□□□□ -0.2
ATM-222	ENST00000533733	MYH2	Q9UKX2	1941 aa		13.83	□□□□□ -0.2
ATM-222	ENST00000533733	NHS	Q6T4R5	1651 aa		13.82	□□□□□ -0.2
ATM-222	ENST00000533733	MAGEB6P1	A0A0J9YX57	407 aa		13.82	□□□□□ -0.2
ATM-222	ENST00000533733	IKBKB	O14920	756 aa		13.82	□□□□□ -0.2
ATM-222	ENST00000533733	ADAMTS2	O95450	1211 aa		13.82	□□□□□ -0.2
ATM-222	ENST00000533733	PTGS1	P23219	599 aa		13.82	□□□□□ -0.2
ATM-222	ENST00000533733	PPARA	Q07869	468 aa		13.82	□□□□□ -0.2
ATM-222	ENST00000533733	RILPL1	Q5EBL4	403 aa		13.82	□□□□□ -0.2
ATM-222	ENST00000533733	OTUD7B	Q6GQQ9	843 aa		13.82	□□□□□ -0.2
ATM-222	ENST00000533733	LCORL	Q8N3X6	602 aa		13.82	□□□□□ -0.2
ATM-222	ENST00000533733	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
ATM-222	ENST00000533733	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.82	□□□□□ -0.2
ATM-222	ENST00000533733	ANKRD2	Q9GZV1	360 aa		13.82	□□□□□ -0.2
ATM-222	ENST00000533733	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.82	□□□□□ -0.2
ATM-222	ENST00000533733	HPSE	Q9Y251	543 aa		13.82	□□□□□ -0.2
ATM-222	ENST00000533733	MMP1	P03956	469 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	CALM1	P0DP23	149 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	CALM2	P0DP24	149 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	CALM3	P0DP25	149 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	PFKFB1	P16118	471 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	CYP7A1	P22680	504 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	SYK	P43405	635 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	CTDSPL2	Q05D32	466 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	PTPA	Q15257	358 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	RESP18	Q5W5W9	173 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	UBAC1	Q9BSL1	405 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	RNF26	Q9BY78	433 aa	Predicted RBP	13.81	□□□□□ -0.2
ATM-222	ENST00000533733	RBM28	Q9NW13	759 aa	Known RBP	13.81	□□□□□ -0.2
ATM-222	ENST00000533733	NRDC	O43847	1150 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	NOSTRIN	Q8IVI9	506 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	CCDC34	Q96HJ3	373 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	MAP3K14	Q99558	947 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	SLC26A6	Q9BXS9	759 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	TUBE1	Q9UJT0	475 aa		13.81	□□□□□ -0.2
ATM-222	ENST00000533733	BTAF1	O14981	1849 aa		13.8	□□□□□ -0.2
ATM-222	ENST00000533733		A0A0G2JS52	829 aa		13.8	□□□□□ -0.2
ATM-222	ENST00000533733	FAM177B	A6PVY3	158 aa		13.8	□□□□□ -0.2
ATM-222	ENST00000533733	RANBP6	O60518	1105 aa	Known RBP	13.8	□□□□□ -0.2
ATM-222	ENST00000533733	BMP15	O95972	392 aa		13.8	□□□□□ -0.2
ATM-222	ENST00000533733	FGR	P09769	529 aa		13.8	□□□□□ -0.2
ATM-222	ENST00000533733	ZNF579	Q8NAF0	562 aa	Known RBP	13.8	□□□□□ -0.2
ATM-222	ENST00000533733	KCND1	Q9NSA2	647 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 12 ms