RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 NEUROD6Q96NK8 337 aa14.17□□□□□ -0.14
TSKU-203ENST00000527881 SLF1Q9BQI6 1058 aa14.17□□□□□ -0.14
TSKU-203ENST00000527881 SLC24A3Q9HC58 644 aa14.17□□□□□ -0.14
TSKU-203ENST00000527881 A0A0G2JLW4 131 aa14.16□□□□□ -0.14
TSKU-203ENST00000527881 E7EWF7 191 aa14.16□□□□□ -0.14
TSKU-203ENST00000527881 PES1O00541 588 aaKnown RBP14.16□□□□□ -0.14
TSKU-203ENST00000527881 FMR1Q06787 632 aaKnown RBP eCLIP14.16□□□□□ -0.14
TSKU-203ENST00000527881 NEDD9Q14511 834 aa14.16□□□□□ -0.14
TSKU-203ENST00000527881 METTL16Q86W50 562 aaKnown RBP14.16□□□□□ -0.14
TSKU-203ENST00000527881 TTF2Q9UNY4 1162 aaKnown RBP14.16□□□□□ -0.14
TSKU-203ENST00000527881 FRMD3A2A2Y4 597 aa14.16□□□□□ -0.14
TSKU-203ENST00000527881 MYO1BO43795 1136 aa14.16□□□□□ -0.14
TSKU-203ENST00000527881 SLC39A14Q15043 492 aa14.16□□□□□ -0.14
TSKU-203ENST00000527881 CCDC70Q6NSX1 233 aa14.16□□□□□ -0.14
TSKU-203ENST00000527881 MSL3Q8N5Y2 521 aaKnown RBP14.16□□□□□ -0.14
TSKU-203ENST00000527881 SSBP05455 408 aaKnown RBP eCLIP14.16□□□□□ -0.14
TSKU-203ENST00000527881 CASP14P31944 242 aa14.16□□□□□ -0.14
TSKU-203ENST00000527881 TRDNQ13061 729 aa14.16□□□□□ -0.14
TSKU-203ENST00000527881 SHC4Q6S5L8 630 aa14.16□□□□□ -0.14
TSKU-203ENST00000527881 COG1Q8WTW3 980 aa14.16□□□□□ -0.14
TSKU-203ENST00000527881 NUP88Q99567 741 aaPredicted RBP14.16□□□□□ -0.14
TSKU-203ENST00000527881 ACEP12821 1306 aa14.15□□□□□ -0.14
TSKU-203ENST00000527881 GRM8O00222 908 aa14.15□□□□□ -0.14
TSKU-203ENST00000527881 GOLIM4O00461 696 aa14.15□□□□□ -0.14
TSKU-203ENST00000527881 RAPGEF3O95398 923 aa14.15□□□□□ -0.14
TSKU-203ENST00000527881 ABL1P00519 1130 aa14.15□□□□□ -0.14
TSKU-203ENST00000527881 PPFIA1Q13136 1202 aa14.15□□□□□ -0.14
TSKU-203ENST00000527881 ANKRD18AQ8IVF6 992 aa14.15□□□□□ -0.14
TSKU-203ENST00000527881 PANX2Q96RD6 677 aa14.15□□□□□ -0.14
TSKU-203ENST00000527881 POLD4Q9HCU8 107 aa14.15□□□□□ -0.14
TSKU-203ENST00000527881 ZNF274Q96GC6 653 aaPredicted RBP14.15□□□□□ -0.14
TSKU-203ENST00000527881 VEZTQ9HBM0 779 aa14.15□□□□□ -0.14
TSKU-203ENST00000527881 SNRKQ9NRH2 765 aa14.15□□□□□ -0.14
TSKU-203ENST00000527881 HDAC6Q9UBN7 1215 aa14.15□□□□□ -0.14
TSKU-203ENST00000527881 KCNQ3O43525 872 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 PRPF6O94906 941 aaKnown RBP14.14□□□□□ -0.15
TSKU-203ENST00000527881 TRIM29Q14134 588 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 GRAMD1CQ8IYS0 662 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 AIFM3Q96NN9 605 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 TEX13AQ9BXU3 409 aaPredicted RBP14.14□□□□□ -0.15
TSKU-203ENST00000527881 VIPAS39Q9H9C1 493 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 PXDNLA1KZ92 1463 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 COL15A1P39059 1388 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 SRGAP2O75044 1071 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 CCT6AP40227 531 aaKnown RBP14.14□□□□□ -0.15
TSKU-203ENST00000527881 ATP1A2P50993 1020 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 ACTN3Q08043 901 aaPredicted RBP14.14□□□□□ -0.15
TSKU-203ENST00000527881 SND1Q7KZF4 910 aaKnown RBP eCLIP14.14□□□□□ -0.15
TSKU-203ENST00000527881 C14orf37Q86TY3 774 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 FOXP4Q8IVH2 680 aaPredicted RBP14.14□□□□□ -0.15
TSKU-203ENST00000527881 ODF2LQ9ULJ1 636 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 ELF1P32519 619 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 KIF23Q02241 960 aaPredicted RBP14.14□□□□□ -0.15
TSKU-203ENST00000527881 PPARDQ03181 441 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 B4GALNT4Q76KP1 1039 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 SELENOOQ9BVL4 669 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 NAA15Q9BXJ9 866 aaKnown RBP14.14□□□□□ -0.15
TSKU-203ENST00000527881 MAN1B1Q9UKM7 699 aa14.14□□□□□ -0.15
TSKU-203ENST00000527881 PDCLQ13371 301 aa14.13□□□□□ -0.15
TSKU-203ENST00000527881 TTC39AQ5SRH9 613 aa14.13□□□□□ -0.15
TSKU-203ENST00000527881 RALYLQ86SE5 291 aaKnown RBP14.13□□□□□ -0.15
TSKU-203ENST00000527881 ALG1Q9BT22 464 aa14.13□□□□□ -0.15
TSKU-203ENST00000527881 CARD10Q9BWT7 1032 aa14.13□□□□□ -0.15
TSKU-203ENST00000527881 DBNLQ9UJU6 430 aaKnown RBP14.13□□□□□ -0.15
TSKU-203ENST00000527881 AARSP49588 968 aaKnown RBP eCLIP14.13□□□□□ -0.15
TSKU-203ENST00000527881 USP14P54578 494 aa14.13□□□□□ -0.15
TSKU-203ENST00000527881 POSTNQ15063 836 aa14.13□□□□□ -0.15
TSKU-203ENST00000527881 VPS37DQ86XT2 251 aa14.13□□□□□ -0.15
TSKU-203ENST00000527881 DBNDD2Q9BQY9 259 aa14.13□□□□□ -0.15
TSKU-203ENST00000527881 POLR2DO15514 142 aaKnown RBP14.13□□□□□ -0.15
TSKU-203ENST00000527881 RXRAP19793 462 aa14.13□□□□□ -0.15
TSKU-203ENST00000527881 CALRP27797 417 aaKnown RBP14.13□□□□□ -0.15
TSKU-203ENST00000527881 MATR3P43243 847 aaKnown RBP eCLIP14.13□□□□□ -0.15
TSKU-203ENST00000527881 TFCP2Q12800 502 aa14.13□□□□□ -0.15
TSKU-203ENST00000527881 WDR93Q6P2C0 686 aa14.13□□□□□ -0.15
TSKU-203ENST00000527881 MLKLQ8NB16 471 aa14.13□□□□□ -0.15
TSKU-203ENST00000527881 DBF4Q9UBU7 674 aaPredicted RBP14.13□□□□□ -0.15
TSKU-203ENST00000527881 ZNF609O15014 1411 aa14.12□□□□□ -0.15
TSKU-203ENST00000527881 EIF3HO15372 352 aaKnown RBP eCLIP14.12□□□□□ -0.15
TSKU-203ENST00000527881 BMP6P22004 513 aa14.12□□□□□ -0.15
TSKU-203ENST00000527881 RIC3Q7Z5B4 369 aa14.12□□□□□ -0.15
TSKU-203ENST00000527881 CNGA4Q8IV77 575 aa14.12□□□□□ -0.15
TSKU-203ENST00000527881 CHUKO15111 745 aa14.12□□□□□ -0.15
TSKU-203ENST00000527881 SLC9C2Q5TAH2 1124 aa14.12□□□□□ -0.15
TSKU-203ENST00000527881 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.12□□□□□ -0.15
TSKU-203ENST00000527881 SCLT1Q96NL6 688 aa14.12□□□□□ -0.15
TSKU-203ENST00000527881 TRIM10Q9UDY6 481 aa14.12□□□□□ -0.15
TSKU-203ENST00000527881 SALL1Q9NSC2 1324 aa14.12□□□□□ -0.15
TSKU-203ENST00000527881 CHD2O14647 1828 aaKnown RBP14.12□□□□□ -0.15
TSKU-203ENST00000527881 CEP85LQ5SZL2 805 aa14.12□□□□□ -0.15
TSKU-203ENST00000527881 MMS19Q96T76 1030 aa14.12□□□□□ -0.15
TSKU-203ENST00000527881 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.12□□□□□ -0.15
TSKU-203ENST00000527881 PRC1O43663 620 aa14.11□□□□□ -0.15
TSKU-203ENST00000527881 MFAP3LO75121 409 aa14.11□□□□□ -0.15
TSKU-203ENST00000527881 COBLO75128 1261 aa14.11□□□□□ -0.15
TSKU-203ENST00000527881 ATP5JP18859 108 aa14.11□□□□□ -0.15
TSKU-203ENST00000527881 EXOSC10Q01780 885 aaKnown RBP14.11□□□□□ -0.15
TSKU-203ENST00000527881 KCTD16Q68DU8 428 aa14.11□□□□□ -0.15
TSKU-203ENST00000527881 MICALCLQ6ZW33 695 aa14.11□□□□□ -0.15
TSKU-203ENST00000527881 RASGRP2Q7LDG7 609 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms