RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 CRISPLD1Q9H336 500 aa7.74□□□□□ -1.17
TMEM39A-212ENST00000497993 ZSWIM4Q9H7M6 989 aa7.74□□□□□ -1.17
TMEM39A-212ENST00000497993 PANK3Q9H999 370 aa7.74□□□□□ -1.17
TMEM39A-212ENST00000497993 POLKQ9UBT6 870 aa7.74□□□□□ -1.17
TMEM39A-212ENST00000497993 IGSF1Q8N6C5 1336 aa7.74□□□□□ -1.17
TMEM39A-212ENST00000497993 EXOC5O00471 708 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 LGR5O75473 907 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 FAM13AO94988 1023 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 ATP4AP20648 1035 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 FBLN1P23142 703 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 AMPHP49418 695 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 FMR1Q06787 632 aaKnown RBP eCLIP7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 RBL2Q08999 1139 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 NFX1Q12986 1120 aaKnown RBP7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 NBPF6Q5VWK0 638 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 TMC7Q7Z402 723 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 TMC4Q7Z404 712 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 DEFB132Q7Z7B7 95 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 KCNB2Q92953 911 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 VTI1AQ96AJ9 217 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 SPACA7Q96KW9 195 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 NBPF4Q96M43 638 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 BRINP2Q9C0B6 783 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 MYH16Q9H6N6 1097 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 VTI1BQ9UEU0 232 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 PARP2Q9UGN5 583 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 SEPT3Q9UH03 358 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 DLG5Q8TDM6 1919 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 MRC1P22897 1456 aa7.73□□□□□ -1.17
TMEM39A-212ENST00000497993 TREHO43280 583 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 TRIM37O94972 964 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 LDHBP07195 334 aaKnown RBP7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 VSIG8P0DPA2 414 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 DNAJA1P31689 397 aaKnown RBP7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 TXLNAP40222 546 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 VEGFBP49765 207 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 ANAPC15P60006 121 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 ARID5AQ03989 594 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 PSMD2Q13200 908 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 DBN1Q16643 649 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 HSP90AB2PQ58FF8 381 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 EFHC2Q5JST6 749 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 SV2AQ7L0J3 742 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 NLRP8Q86W28 1048 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 IRF7Q92985 503 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 COL26A1Q96A83 441 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 CITED4Q96RK1 184 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 GPAMQ9HCL2 828 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 HCN4Q9Y3Q4 1203 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 RIPOR2Q9Y4F9 1068 aa7.72□□□□□ -1.17
TMEM39A-212ENST00000497993 MYH14Q7Z406 1995 aaKnown RBP7.71□□□□□ -1.17
TMEM39A-212ENST00000497993 ATP2B2Q01814 1243 aa7.71□□□□□ -1.18
TMEM39A-212ENST00000497993 ARSJQ5FYB0 599 aaPredicted RBP7.71□□□□□ -1.18
TMEM39A-212ENST00000497993 FAM182BQ5T319 152 aa7.71□□□□□ -1.18
TMEM39A-212ENST00000497993 SH3PXD2AQ5TCZ1 1133 aa7.71□□□□□ -1.18
TMEM39A-212ENST00000497993 ALDH16A1Q8IZ83 802 aa7.71□□□□□ -1.18
TMEM39A-212ENST00000497993 HELQQ8TDG4 1101 aa7.71□□□□□ -1.18
TMEM39A-212ENST00000497993 C7orf43Q8WVR3 580 aa7.71□□□□□ -1.18
TMEM39A-212ENST00000497993 PHACTR1Q9C0D0 580 aa7.71□□□□□ -1.18
TMEM39A-212ENST00000497993 NUCKS1Q9H1E3 243 aaKnown RBP7.71□□□□□ -1.18
TMEM39A-212ENST00000497993 ACBD3Q9H3P7 528 aa7.71□□□□□ -1.18
TMEM39A-212ENST00000497993 RUBCNLQ9H714 662 aa7.71□□□□□ -1.18
TMEM39A-212ENST00000497993 PCDH11XQ9BZA7 1347 aa7.71□□□□□ -1.18
TMEM39A-212ENST00000497993 PCDH11YQ9BZA8 1340 aa7.71□□□□□ -1.18
TMEM39A-212ENST00000497993 WFS1O76024 890 aa7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 FKBP5Q13451 457 aaPredicted RBP7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 MTMR3Q13615 1198 aa7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 HIF1AQ16665 826 aa7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 RNF187Q5TA31 235 aaPredicted RBP7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 FOXR1Q6PIV2 292 aa7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 TREML4Q6UXN2 200 aa7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 BICDL1Q6ZP65 573 aa7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 VWA5B2Q8N398 1253 aa7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 UBE2Q2Q8WVN8 375 aa7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 ZNF837Q96EG3 531 aaPredicted RBP7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 GPATCH3Q96I76 525 aa7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 ZIC5Q96T25 663 aa7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 DUSP9Q99956 384 aaKnown RBP7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 MKNK1Q9BUB5 465 aa7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 OSBPL2Q9H1P3 480 aa7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 PIF1Q9H611 641 aa7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 NOP58Q9Y2X3 529 aaKnown RBP7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 KNSTRNQ9Y448 316 aa7.7□□□□□ -1.18
TMEM39A-212ENST00000497993 C4BP0C0L5 1744 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 KIF13BQ9NQT8 1826 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 LOC102724159A0A0B4J2E5 919 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 A0A1W2PNR3 127 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 CDC14CA4D256 554 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 NPR3P17342 541 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 HSD3B2P26439 372 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 DAB2P98082 770 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 PLCB3Q01970 1234 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 EIF4A2Q14240 407 aaKnown RBP7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 PWP2Q15269 919 aaKnown RBP7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 EZH2Q15910 746 aaKnown RBP7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 RTN1Q16799 776 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 GORABQ5T7V8 394 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 FIGNL1Q6PIW4 674 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 VPS37DQ86XT2 251 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms