RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 PKP1Q13835 747 aa8.03□□□□□ -1.12
MSH5-217ENST00000494458 CTR9Q6PD62 1173 aa8.03□□□□□ -1.12
MSH5-217ENST00000494458 OLFM4Q6UX06 510 aa8.03□□□□□ -1.12
MSH5-217ENST00000494458 DPP8Q6V1X1 898 aaPredicted RBP8.03□□□□□ -1.12
MSH5-217ENST00000494458 MIGA1Q8NAN2 632 aa8.03□□□□□ -1.12
MSH5-217ENST00000494458 CHMP4CQ96CF2 233 aa8.03□□□□□ -1.12
MSH5-217ENST00000494458 TMEM87BQ96K49 555 aa8.03□□□□□ -1.12
MSH5-217ENST00000494458 GPR101Q96P66 508 aaPredicted RBP8.03□□□□□ -1.12
MSH5-217ENST00000494458 ZC3H12CQ9C0D7 883 aaKnown RBP8.03□□□□□ -1.12
MSH5-217ENST00000494458 MTFR1LQ9H019 292 aa8.03□□□□□ -1.12
MSH5-217ENST00000494458 NAPBQ9H115 298 aa8.03□□□□□ -1.12
MSH5-217ENST00000494458 HPS5Q9UPZ3 1129 aa8.03□□□□□ -1.12
MSH5-217ENST00000494458 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.03□□□□□ -1.12
MSH5-217ENST00000494458 MROH7-TTC4A0A0A0MT08 1334 aa8.03□□□□□ -1.12
MSH5-217ENST00000494458 CHD4Q14839 1912 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 ROBO3Q96MS0 1386 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 ZNF646O15015 1829 aaPredicted RBP8.02□□□□□ -1.13
MSH5-217ENST00000494458 C6orf229H3BNL8 230 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 SH2B2O14492 632 aaPredicted RBP8.02□□□□□ -1.13
MSH5-217ENST00000494458 PRC1O43663 620 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 CTDNEP1O95476 244 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 HSP90AA1P07900 732 aaKnown RBP8.02□□□□□ -1.13
MSH5-217ENST00000494458 SYT1P21579 422 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 CHRNA5P30532 468 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 TIE1P35590 1138 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 HAND2P61296 217 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 PPARAQ07869 468 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 SCRN1Q12765 414 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 CHAF1AQ13111 956 aaPredicted RBP8.02□□□□□ -1.13
MSH5-217ENST00000494458 MFSD14BQ5SR56 506 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 STRIP1Q5VSL9 837 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 HHIPL2Q6UWX4 724 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 CYB5R4Q7L1T6 521 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 ILDR1Q86SU0 546 aaPredicted RBP8.02□□□□□ -1.13
MSH5-217ENST00000494458 CERS5Q8N5B7 392 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 SDR42E1Q8WUS8 393 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 UPF1Q92900 1129 aaKnown RBP eCLIP8.02□□□□□ -1.13
MSH5-217ENST00000494458 BRF1Q92994 677 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 TCEANC2Q96MN5 208 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 CRNKL1Q9BZJ0 848 aaKnown RBP8.02□□□□□ -1.13
MSH5-217ENST00000494458 KRT23Q9C075 422 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 RNF41Q9H4P4 317 aaPredicted RBP8.02□□□□□ -1.13
MSH5-217ENST00000494458 ZSWIM5Q9P217 1185 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 NEDD4P46934 1319 aa8.02□□□□□ -1.13
MSH5-217ENST00000494458 MYH13Q9UKX3 1938 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 CCDC88AQ3V6T2 1871 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 BAG4O95429 457 aaKnown RBP8.01□□□□□ -1.13
MSH5-217ENST00000494458 BAG3O95817 575 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 APPP05067 770 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 NOVP48745 357 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 SEC23AQ15436 765 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 DACT2Q5SW24 774 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 C12orf60Q5U649 245 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 MFSD6Q6ZSS7 791 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 CCDC83Q8IWF9 413 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 SLF2Q8IX21 1173 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 RTKN2Q8IZC4 609 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 TMTC2Q8N394 836 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 TTLL6Q8N841 843 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 NECAB1Q8N987 351 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 NSUN7Q8NE18 718 aaKnown RBP8.01□□□□□ -1.13
MSH5-217ENST00000494458 SUPT20HQ8NEM7 779 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 ANKS1AQ92625 1134 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 ZNF622Q969S3 477 aaKnown RBP eCLIP8.01□□□□□ -1.131e-17■□□□□ 10.4
MSH5-217ENST00000494458 LARP6Q9BRS8 491 aaKnown RBP8.01□□□□□ -1.13
MSH5-217ENST00000494458 LY9Q9HBG7 655 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 FAM217BQ9NTX9 383 aaPredicted RBP8.01□□□□□ -1.13
MSH5-217ENST00000494458 ARPP21Q9UBL0 812 aaPredicted RBP8.01□□□□□ -1.13
MSH5-217ENST00000494458 TAOK2Q9UL54 1235 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 BRPF3Q9ULD4 1205 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 ANGEL1Q9UNK9 670 aaKnown RBP8.01□□□□□ -1.13
MSH5-217ENST00000494458 MTMR6Q9Y217 621 aa8.01□□□□□ -1.13
MSH5-217ENST00000494458 B4E1Z4 1266 aa8□□□□□ -1.13
MSH5-217ENST00000494458 USP17L12C9JPN9 530 aa8□□□□□ -1.13
MSH5-217ENST00000494458 USP17L21D6R901 530 aa8□□□□□ -1.13
MSH5-217ENST00000494458 STX6O43752 255 aa8□□□□□ -1.13
MSH5-217ENST00000494458 DPEP1P16444 411 aa8□□□□□ -1.13
MSH5-217ENST00000494458 PLCG2P16885 1265 aa8□□□□□ -1.13
MSH5-217ENST00000494458 GJB2P29033 226 aa8□□□□□ -1.13
MSH5-217ENST00000494458 PTGER2P43116 358 aa8□□□□□ -1.13
MSH5-217ENST00000494458 GTF2IP78347 998 aa8□□□□□ -1.13
MSH5-217ENST00000494458 CTDSPL2Q05D32 466 aa8□□□□□ -1.13
MSH5-217ENST00000494458 APOBRQ0VD83 1088 aa8□□□□□ -1.13
MSH5-217ENST00000494458 TRDNQ13061 729 aa8□□□□□ -1.13
MSH5-217ENST00000494458 MMRN1Q13201 1228 aa8□□□□□ -1.13
MSH5-217ENST00000494458 DIXDC1Q155Q3 683 aa8□□□□□ -1.13
MSH5-217ENST00000494458 NTRK3Q16288 839 aa8□□□□□ -1.13
MSH5-217ENST00000494458 APOBEC3HQ6NTF7 200 aaKnown RBP8□□□□□ -1.13
MSH5-217ENST00000494458 RALYLQ86SE5 291 aaKnown RBP8□□□□□ -1.13
MSH5-217ENST00000494458 DZIP1Q86YF9 867 aaKnown RBP8□□□□□ -1.13
MSH5-217ENST00000494458 GMLQ99445 158 aa8□□□□□ -1.13
MSH5-217ENST00000494458 LRRC2Q9BYS8 371 aa8□□□□□ -1.13
MSH5-217ENST00000494458 TMX4Q9H1E5 349 aaPredicted RBP8□□□□□ -1.13
MSH5-217ENST00000494458 INCENPQ9NQS7 918 aa8□□□□□ -1.13
MSH5-217ENST00000494458 GPHNQ9NQX3 736 aaPredicted RBP8□□□□□ -1.13
MSH5-217ENST00000494458 TCP11L1Q9NUJ3 509 aa8□□□□□ -1.13
MSH5-217ENST00000494458 AATFQ9NY61 560 aaKnown RBP eCLIP8□□□□□ -1.13
MSH5-217ENST00000494458 SMC3Q9UQE7 1217 aa8□□□□□ -1.13
MSH5-217ENST00000494458 CD2APQ9Y5K6 639 aa8□□□□□ -1.13
MSH5-217ENST00000494458 WDR33Q9C0J8 1336 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms