RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 FBXO33Q7Z6M2 555 aa16.03■□□□□ 0.16
VCP-207ENST00000493886 LUZP1Q86V48 1076 aa16.03■□□□□ 0.16
VCP-207ENST00000493886 KRT23Q9C075 422 aa16.03■□□□□ 0.16
VCP-207ENST00000493886 LY9Q9HBG7 655 aa16.03■□□□□ 0.16
VCP-207ENST00000493886 TERF1P54274 439 aa16.03■□□□□ 0.16
VCP-207ENST00000493886 IRX3P78415 501 aaPredicted RBP16.03■□□□□ 0.16
VCP-207ENST00000493886 MAP3K11Q16584 847 aa16.03■□□□□ 0.16
VCP-207ENST00000493886 TRAPPC3LQ5T215 181 aa16.03■□□□□ 0.16
VCP-207ENST00000493886 NFXL1Q6ZNB6 911 aa16.03■□□□□ 0.16
VCP-207ENST00000493886 SGMS1Q86VZ5 419 aa16.03■□□□□ 0.16
VCP-207ENST00000493886 FBXO18Q8NFZ0 1043 aa16.03■□□□□ 0.16
VCP-207ENST00000493886 STAG1Q8WVM7 1258 aa16.03■□□□□ 0.16
VCP-207ENST00000493886 MAGEB6P1A0A0J9YX57 407 aa16.02■□□□□ 0.16
VCP-207ENST00000493886 ZBTB22O15209 634 aa16.02■□□□□ 0.16
VCP-207ENST00000493886 ONECUT3O60422 494 aaPredicted RBP16.02■□□□□ 0.16
VCP-207ENST00000493886 RXRAP19793 462 aa16.02■□□□□ 0.16
VCP-207ENST00000493886 KLRK1P26718 216 aa16.02■□□□□ 0.16
VCP-207ENST00000493886 PIBF1Q8WXW3 757 aa16.02■□□□□ 0.16
VCP-207ENST00000493886 ANKRD2Q9GZV1 360 aa16.02■□□□□ 0.16
VCP-207ENST00000493886 NPHP1O15259 732 aa16.02■□□□□ 0.15
VCP-207ENST00000493886 ZBTB43O43298 467 aa16.02■□□□□ 0.15
VCP-207ENST00000493886 CCDC192P0DO97 292 aa16.02■□□□□ 0.15
VCP-207ENST00000493886 LIFRP42702 1097 aa16.02■□□□□ 0.15
VCP-207ENST00000493886 MICU3Q86XE3 530 aa16.02■□□□□ 0.15
VCP-207ENST00000493886 SEPT12Q8IYM1 358 aa16.02■□□□□ 0.15
VCP-207ENST00000493886 TNMDQ9H2S6 317 aa16.02■□□□□ 0.15
VCP-207ENST00000493886 CACNA1SQ13698 1873 aa16.02■□□□□ 0.15
VCP-207ENST00000493886 IFIT3O14879 490 aaKnown RBP16.01■□□□□ 0.15
VCP-207ENST00000493886 SEMA3EO15041 775 aa16.01■□□□□ 0.15
VCP-207ENST00000493886 NR1I2O75469 434 aa16.01■□□□□ 0.15
VCP-207ENST00000493886 TM4SF1P30408 202 aa16.01■□□□□ 0.15
VCP-207ENST00000493886 FAM196AQ6ZSG2 479 aa16.01■□□□□ 0.15
VCP-207ENST00000493886 PYCARDQ9ULZ3 195 aa16.01■□□□□ 0.15
VCP-207ENST00000493886 CDKL5O76039 1030 aa16.01■□□□□ 0.15
VCP-207ENST00000493886 CDC27P30260 824 aa16.01■□□□□ 0.15
VCP-207ENST00000493886 RRP12Q5JTH9 1297 aaKnown RBP16.01■□□□□ 0.15
VCP-207ENST00000493886 SDR42E1Q8WUS8 393 aa16.01■□□□□ 0.15
VCP-207ENST00000493886 CLSTN2Q9H4D0 955 aa16.01■□□□□ 0.15
VCP-207ENST00000493886 TOMM22Q9NS69 142 aa16.01■□□□□ 0.15
VCP-207ENST00000493886 CPLX2Q6PUV4 134 aaKnown RBP16.01■□□□□ 0.15
VCP-207ENST00000493886 RIOK1Q9BRS2 568 aaKnown RBP16.01■□□□□ 0.15
VCP-207ENST00000493886 TRPC5Q9UL62 973 aaPredicted RBP16.01■□□□□ 0.15
VCP-207ENST00000493886 GOLGA8AA7E2F4 631 aa16■□□□□ 0.15
VCP-207ENST00000493886 PPARAQ07869 468 aa16■□□□□ 0.15
VCP-207ENST00000493886 KCNF1Q9H3M0 494 aa16■□□□□ 0.15
VCP-207ENST00000493886 GJB4Q9NTQ9 266 aa16■□□□□ 0.15
VCP-207ENST00000493886 HIBADHP31937 336 aaKnown RBP16■□□□□ 0.15
VCP-207ENST00000493886 HSPA1LP34931 641 aa16■□□□□ 0.15
VCP-207ENST00000493886 TYRO3Q06418 890 aa16■□□□□ 0.15
VCP-207ENST00000493886 CCDC144CPQ8IYA2 1237 aa16■□□□□ 0.15
VCP-207ENST00000493886 MYL10Q9BUA6 226 aa16■□□□□ 0.15
VCP-207ENST00000493886 RNF41Q9H4P4 317 aaPredicted RBP16■□□□□ 0.15
VCP-207ENST00000493886 TFCP2L1Q9NZI6 479 aa16■□□□□ 0.15
VCP-207ENST00000493886 SLC12A7Q9Y666 1083 aa16■□□□□ 0.15
VCP-207ENST00000493886 CCDC69A6NI79 296 aa15.99■□□□□ 0.15
VCP-207ENST00000493886 NFIXQ14938 502 aa15.99■□□□□ 0.15
VCP-207ENST00000493886 RBM43Q6ZSC3 357 aaKnown RBP15.99■□□□□ 0.15
VCP-207ENST00000493886 STK11IPQ8N1F8 1099 aa15.99■□□□□ 0.15
VCP-207ENST00000493886 LRRC4BQ9NT99 713 aa15.99■□□□□ 0.15
VCP-207ENST00000493886 ANO6Q4KMQ2 910 aa15.99■□□□□ 0.15
VCP-207ENST00000493886 ZNF384Q8TF68 577 aa15.99■□□□□ 0.15
VCP-207ENST00000493886 ALG1Q9BT22 464 aa15.99■□□□□ 0.15
VCP-207ENST00000493886 FAM217BQ9NTX9 383 aaPredicted RBP15.99■□□□□ 0.15
VCP-207ENST00000493886 RTEL1Q9NZ71 1219 aa15.99■□□□□ 0.15
VCP-207ENST00000493886 MRVI1Q9Y6F6 885 aa15.99■□□□□ 0.15
VCP-207ENST00000493886 TNRC6CQ9HCJ0 1690 aaKnown RBP15.99■□□□□ 0.15
VCP-207ENST00000493886 PDS5AQ29RF7 1337 aaKnown RBP15.99■□□□□ 0.15
VCP-207ENST00000493886 MINDY4BA8MYZ0 360 aa15.98■□□□□ 0.15
VCP-207ENST00000493886 DYNC1I1O14576 645 aa15.98■□□□□ 0.15
VCP-207ENST00000493886 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
VCP-207ENST00000493886 POLR3DP05423 398 aaPredicted RBP15.98■□□□□ 0.15
VCP-207ENST00000493886 DYNLL1P63167 89 aaKnown RBP15.98■□□□□ 0.15
VCP-207ENST00000493886 SART3Q15020 963 aaKnown RBP15.98■□□□□ 0.15
VCP-207ENST00000493886 NTRK3Q16288 839 aa15.98■□□□□ 0.15
VCP-207ENST00000493886 BRAPQ7Z569 592 aa15.98■□□□□ 0.15
VCP-207ENST00000493886 CCAR1Q8IX12 1150 aaKnown RBP15.98■□□□□ 0.15
VCP-207ENST00000493886 CERKQ8TCT0 537 aa15.98■□□□□ 0.15
VCP-207ENST00000493886 PHKBQ93100 1093 aa15.98■□□□□ 0.15
VCP-207ENST00000493886 AIFM3Q96NN9 605 aa15.98■□□□□ 0.15
VCP-207ENST00000493886 ZKSCAN3Q9BRR0 538 aa15.98■□□□□ 0.15
VCP-207ENST00000493886 ANAPC4Q9UJX5 808 aa15.98■□□□□ 0.15
VCP-207ENST00000493886 MYH13Q9UKX3 1938 aa15.98■□□□□ 0.15
VCP-207ENST00000493886 PTGS1P23219 599 aa15.98■□□□□ 0.15
VCP-207ENST00000493886 KIF23Q02241 960 aaPredicted RBP15.98■□□□□ 0.15
VCP-207ENST00000493886 SYNE3Q6ZMZ3 975 aa15.98■□□□□ 0.15
VCP-207ENST00000493886 MTA3Q9BTC8 594 aa15.98■□□□□ 0.15
VCP-207ENST00000493886 KIF28PB7ZC32 967 aa15.97■□□□□ 0.15
VCP-207ENST00000493886 IARSP41252 1262 aaKnown RBP15.97■□□□□ 0.15
VCP-207ENST00000493886 ME1P48163 572 aa15.97■□□□□ 0.15
VCP-207ENST00000493886 WTAPQ15007 396 aa15.97■□□□□ 0.15
VCP-207ENST00000493886 MYSM1Q5VVJ2 828 aa15.97■□□□□ 0.15
VCP-207ENST00000493886 CNBD1Q8NA66 436 aa15.97■□□□□ 0.15
VCP-207ENST00000493886 FAM200AQ8TCP9 573 aa15.97■□□□□ 0.15
VCP-207ENST00000493886 NSUN4Q96CB9 384 aaKnown RBP15.97■□□□□ 0.15
VCP-207ENST00000493886 A0A087WWV3 80 aa15.97■□□□□ 0.15
VCP-207ENST00000493886 ADRA2BP18089 450 aa15.97■□□□□ 0.15
VCP-207ENST00000493886 DRC7Q8IY82 874 aa15.97■□□□□ 0.15
VCP-207ENST00000493886 ERICH2A1L162 156 aa15.96■□□□□ 0.15
VCP-207ENST00000493886 RANBP6O60518 1105 aaKnown RBP15.96■□□□□ 0.15
VCP-207ENST00000493886 MECOMQ03112 1051 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms