RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 INCENPQ9NQS7 918 aa20.74■□□□□ 0.91
CCDC78-214ENST00000485091 SAP30BPQ9UHR5 308 aaKnown RBP20.74■□□□□ 0.91
CCDC78-214ENST00000485091 CYP46A1Q9Y6A2 500 aa20.74■□□□□ 0.91
CCDC78-214ENST00000485091 CYP2D6P10635 497 aa20.73■□□□□ 0.91
CCDC78-214ENST00000485091 EVX2Q03828 476 aa20.73■□□□□ 0.91
CCDC78-214ENST00000485091 BECN1Q14457 450 aa20.73■□□□□ 0.91
CCDC78-214ENST00000485091 RUFY3Q7L099 469 aa20.73■□□□□ 0.91
CCDC78-214ENST00000485091 BAZ2AQ9UIF9 1905 aaKnown RBP20.73■□□□□ 0.91
CCDC78-214ENST00000485091 SHTN1A0MZ66 631 aa20.73■□□□□ 0.91
CCDC78-214ENST00000485091 CACNB3P54284 484 aa20.73■□□□□ 0.91
CCDC78-214ENST00000485091 PRMT6Q96LA8 375 aaPredicted RBP20.73■□□□□ 0.91
CCDC78-214ENST00000485091 PDRG1Q9NUG6 133 aa20.73■□□□□ 0.91
CCDC78-214ENST00000485091 DAXXQ9UER7 740 aaPredicted RBP20.73■□□□□ 0.91
CCDC78-214ENST00000485091 FLT1P17948 1338 aa20.72■□□□□ 0.91
CCDC78-214ENST00000485091 YY1P25490 414 aa20.72■□□□□ 0.91
CCDC78-214ENST00000485091 GMPSP49915 693 aaPredicted RBP20.72■□□□□ 0.91
CCDC78-214ENST00000485091 TDRD3Q9H7E2 651 aaKnown RBP20.72■□□□□ 0.91
CCDC78-214ENST00000485091 MKRN1Q9UHC7 482 aaKnown RBP20.72■□□□□ 0.91
CCDC78-214ENST00000485091 RPS6KB1P23443 525 aa20.71■□□□□ 0.91
CCDC78-214ENST00000485091 DLGAP5Q15398 846 aa20.71■□□□□ 0.91
CCDC78-214ENST00000485091 C9orf131Q5VYM1 1079 aa20.71■□□□□ 0.91
CCDC78-214ENST00000485091 SNX21Q969T3 373 aa20.71■□□□□ 0.91
CCDC78-214ENST00000485091 TOMM22Q9NS69 142 aa20.71■□□□□ 0.91
CCDC78-214ENST00000485091 ARPP21Q9UBL0 812 aaPredicted RBP20.71■□□□□ 0.91
CCDC78-214ENST00000485091 SBF1O95248 1867 aa20.71■□□□□ 0.91
CCDC78-214ENST00000485091 WDHD1O75717 1129 aaPredicted RBP20.7■□□□□ 0.9
CCDC78-214ENST00000485091 POLR3DP05423 398 aaPredicted RBP20.7■□□□□ 0.9
CCDC78-214ENST00000485091 RRP12Q5JTH9 1297 aaKnown RBP20.7■□□□□ 0.9
CCDC78-214ENST00000485091 CHST3Q7LGC8 479 aa20.7■□□□□ 0.9
CCDC78-214ENST00000485091 RALYLQ86SE5 291 aaKnown RBP20.7■□□□□ 0.9
CCDC78-214ENST00000485091 LARP6Q9BRS8 491 aaKnown RBP20.7■□□□□ 0.9
CCDC78-214ENST00000485091 DDX4Q9NQI0 724 aaKnown RBP20.7■□□□□ 0.9
CCDC78-214ENST00000485091 TACC3Q9Y6A5 838 aa20.7■□□□□ 0.9
CCDC78-214ENST00000485091 LAMA4Q16363 1823 aa20.7■□□□□ 0.9
CCDC78-214ENST00000485091 TRDNQ13061 729 aa20.7■□□□□ 0.9
CCDC78-214ENST00000485091 AKNAD1Q5T1N1 836 aa20.7■□□□□ 0.9
CCDC78-214ENST00000485091 RBM26Q5T8P6 1007 aaKnown RBP20.7■□□□□ 0.9
CCDC78-214ENST00000485091 MFSD6Q6ZSS7 791 aa20.7■□□□□ 0.9
CCDC78-214ENST00000485091 AMOTL1Q8IY63 956 aa20.7■□□□□ 0.9
CCDC78-214ENST00000485091 NCOA7Q8NI08 942 aa20.7■□□□□ 0.9
CCDC78-214ENST00000485091 LRRC2Q9BYS8 371 aa20.7■□□□□ 0.9
CCDC78-214ENST00000485091 NEDD4P46934 1319 aa20.69■□□□□ 0.9
CCDC78-214ENST00000485091 RPS12P25398 132 aaKnown RBP20.69■□□□□ 0.9
CCDC78-214ENST00000485091 AK2P54819 239 aa20.69■□□□□ 0.9
CCDC78-214ENST00000485091 NFIAQ12857 509 aa20.69■□□□□ 0.9
CCDC78-214ENST00000485091 SBK1Q52WX2 424 aa20.69■□□□□ 0.9
CCDC78-214ENST00000485091 TTC14Q96N46 770 aa20.69■□□□□ 0.9
CCDC78-214ENST00000485091 NAV1Q8NEY1 1877 aa20.69■□□□□ 0.9
CCDC78-214ENST00000485091 CDK5RAP2Q96SN8 1893 aa20.69■□□□□ 0.9
CCDC78-214ENST00000485091 CLRN2A0PK11 232 aa20.68■□□□□ 0.9
CCDC78-214ENST00000485091 SPDYE2BA6NHP3 402 aa20.68■□□□□ 0.9
CCDC78-214ENST00000485091 B4E1Z4 1266 aa20.68■□□□□ 0.9
CCDC78-214ENST00000485091 SPDYE6P0CI01 402 aa20.68■□□□□ 0.9
CCDC78-214ENST00000485091 TCP10Q12799 353 aa20.68■□□□□ 0.9
CCDC78-214ENST00000485091 MICALL2Q8IY33 904 aa20.68■□□□□ 0.9
CCDC78-214ENST00000485091 NKX2-3Q8TAU0 364 aa20.68■□□□□ 0.9
CCDC78-214ENST00000485091 MYOZ2Q9NPC6 264 aa20.68■□□□□ 0.9
CCDC78-214ENST00000485091 CNOT7Q9UIV1 285 aaKnown RBP20.68■□□□□ 0.9
CCDC78-214ENST00000485091 ANAPC4Q9UJX5 808 aa20.68■□□□□ 0.9
CCDC78-214ENST00000485091 DICER1Q9UPY3 1922 aaKnown RBP20.68■□□□□ 0.9
CCDC78-214ENST00000485091 HMGB1P09429 215 aaKnown RBP20.67■□□□□ 0.9
CCDC78-214ENST00000485091 PLCD1P51178 756 aa20.67■□□□□ 0.9
CCDC78-214ENST00000485091 C12orf60Q5U649 245 aa20.67■□□□□ 0.9
CCDC78-214ENST00000485091 DHX32Q7L7V1 743 aaKnown RBP20.67■□□□□ 0.9
CCDC78-214ENST00000485091 SPRYD3Q8NCJ5 442 aa20.67■□□□□ 0.9
CCDC78-214ENST00000485091 STAG1Q8WVM7 1258 aa20.67■□□□□ 0.9
CCDC78-214ENST00000485091 K7ELQ4 463 aaPredicted RBP20.67■□□□□ 0.9
CCDC78-214ENST00000485091 PRDM1O75626 825 aa20.67■□□□□ 0.9
CCDC78-214ENST00000485091 DYNLL2Q96FJ2 89 aa20.67■□□□□ 0.9
CCDC78-214ENST00000485091 RNF41Q9H4P4 317 aaPredicted RBP20.67■□□□□ 0.9
CCDC78-214ENST00000485091 SLC3A2P08195 630 aaKnown RBP20.66■□□□□ 0.9
CCDC78-214ENST00000485091 FGD1P98174 961 aa20.66■□□□□ 0.9
CCDC78-214ENST00000485091 Q6ZUG5 572 aa20.66■□□□□ 0.9
CCDC78-214ENST00000485091 ZFPM1Q8IX07 1006 aa20.66■□□□□ 0.9
CCDC78-214ENST00000485091 MB21D2Q8IYB1 491 aaPredicted RBP20.66■□□□□ 0.9
CCDC78-214ENST00000485091 DPF2Q92785 391 aa20.66■□□□□ 0.9
CCDC78-214ENST00000485091 DDNO94850 711 aaPredicted RBP20.65■□□□□ 0.9
CCDC78-214ENST00000485091 TBC1D10BQ4KMP7 808 aaPredicted RBP20.65■□□□□ 0.9
CCDC78-214ENST00000485091 CYB5R4Q7L1T6 521 aa20.65■□□□□ 0.9
CCDC78-214ENST00000485091 SAMD7Q7Z3H4 446 aa20.65■□□□□ 0.9
CCDC78-214ENST00000485091 GPC2Q8N158 579 aa20.65■□□□□ 0.9
CCDC78-214ENST00000485091 OSBPL5Q9H0X9 879 aaPredicted RBP20.65■□□□□ 0.9
CCDC78-214ENST00000485091 CNNM2Q9H8M5 875 aa20.65■□□□□ 0.9
CCDC78-214ENST00000485091 TIAM2Q8IVF5 1701 aa20.65■□□□□ 0.9
CCDC78-214ENST00000485091 ECM29Q5VYK3 1845 aa20.64■□□□□ 0.9
CCDC78-214ENST00000485091 TCP10L2B9ZVM9 353 aa20.64■□□□□ 0.9
CCDC78-214ENST00000485091 PRC1O43663 620 aa20.64■□□□□ 0.9
CCDC78-214ENST00000485091 KDM4AO75164 1064 aa20.64■□□□□ 0.9
CCDC78-214ENST00000485091 EGFRP00533 1210 aa20.64■□□□□ 0.9
CCDC78-214ENST00000485091 MCM5P33992 734 aa20.64■□□□□ 0.9
CCDC78-214ENST00000485091 ZNF280AP59817 542 aaPredicted RBP20.64■□□□□ 0.9
CCDC78-214ENST00000485091 EXOSC10Q01780 885 aaKnown RBP20.64■□□□□ 0.9
CCDC78-214ENST00000485091 NBPF9Q3BBW0 867 aa20.64■□□□□ 0.9
CCDC78-214ENST00000485091 MTMR14Q8NCE2 650 aa20.64■□□□□ 0.9
CCDC78-214ENST00000485091 KRT23Q9C075 422 aa20.64■□□□□ 0.9
CCDC78-214ENST00000485091 VEZTQ9HBM0 779 aa20.64■□□□□ 0.9
CCDC78-214ENST00000485091 TMOD2Q9NZR1 351 aa20.64■□□□□ 0.9
CCDC78-214ENST00000485091 ZNF70Q9UC06 446 aaPredicted RBP20.64■□□□□ 0.9
CCDC78-214ENST00000485091 FAM198AQ9UFP1 575 aa20.64■□□□□ 0.9
CCDC78-214ENST00000485091 LAMB1P07942 1786 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms