RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 U3KQE9 123 aa4.94□□□□□ -1.62
PKP4-212ENST00000483881 UBAP1LF5GYI3 381 aa4.93□□□□□ -1.62
PKP4-212ENST00000483881 PDGFAP04085 211 aa4.93□□□□□ -1.62
PKP4-212ENST00000483881 CELA3BP08861 270 aa4.93□□□□□ -1.62
PKP4-212ENST00000483881 INSRRP14616 1297 aa4.93□□□□□ -1.62
PKP4-212ENST00000483881 PUM1Q14671 1186 aaKnown RBP eCLIP4.93□□□□□ -1.62
PKP4-212ENST00000483881 C8orf34Q49A92 452 aa4.93□□□□□ -1.62
PKP4-212ENST00000483881 SEZ6L2Q6UXD5 910 aa4.93□□□□□ -1.62
PKP4-212ENST00000483881 NLRP13Q86W25 1043 aa4.93□□□□□ -1.62
PKP4-212ENST00000483881 ETFBKMTQ8IXQ9 262 aa4.93□□□□□ -1.62
PKP4-212ENST00000483881 GPR152Q8TDT2 470 aa4.93□□□□□ -1.62
PKP4-212ENST00000483881 ALKBH8Q96BT7 664 aaKnown RBP4.93□□□□□ -1.62
PKP4-212ENST00000483881 NUDT16Q96DE0 195 aaKnown RBP4.93□□□□□ -1.62
PKP4-212ENST00000483881 POLIQ9UNA4 740 aa4.93□□□□□ -1.62
PKP4-212ENST00000483881 LOC100289279A0A1B0GTE1 492 aa4.92□□□□□ -1.62
PKP4-212ENST00000483881 DYNC1LI2O43237 492 aaPredicted RBP4.92□□□□□ -1.62
PKP4-212ENST00000483881 FZD6O60353 706 aa4.92□□□□□ -1.62
PKP4-212ENST00000483881 SCNN1AP37088 669 aa4.92□□□□□ -1.62
PKP4-212ENST00000483881 AFMP43652 599 aa4.92□□□□□ -1.62
PKP4-212ENST00000483881 MTMR3Q13615 1198 aa4.92□□□□□ -1.62
PKP4-212ENST00000483881 EXOSC6Q5RKV6 272 aaKnown RBP4.92□□□□□ -1.62
PKP4-212ENST00000483881 ANGEL2Q5VTE6 544 aaKnown RBP4.92□□□□□ -1.62
PKP4-212ENST00000483881 ALG1LQ6GMV1 187 aa4.92□□□□□ -1.62
PKP4-212ENST00000483881 ZNF438Q7Z4V0 828 aa4.92□□□□□ -1.62
PKP4-212ENST00000483881 LSRQ86X29 649 aaPredicted RBP4.92□□□□□ -1.62
PKP4-212ENST00000483881 GJD3Q8N144 294 aa4.92□□□□□ -1.62
PKP4-212ENST00000483881 ANKRD33BA6NCL7 494 aa4.91□□□□□ -1.62
PKP4-212ENST00000483881 FAM177BA6PVY3 158 aa4.91□□□□□ -1.62
PKP4-212ENST00000483881 GIPC1O14908 333 aa4.91□□□□□ -1.62
PKP4-212ENST00000483881 RAB6AP20340 208 aa4.91□□□□□ -1.62
PKP4-212ENST00000483881 GLDCP23378 1020 aa4.91□□□□□ -1.62
PKP4-212ENST00000483881 CABP4P57796 275 aa4.91□□□□□ -1.62
PKP4-212ENST00000483881 C19orf57Q0VDD7 668 aa4.91□□□□□ -1.62
PKP4-212ENST00000483881 EAPPQ56P03 285 aaPredicted RBP4.91□□□□□ -1.62
PKP4-212ENST00000483881 TMEM67Q5HYA8 995 aa4.91□□□□□ -1.62
PKP4-212ENST00000483881 MARCH10Q8NA82 808 aaPredicted RBP4.91□□□□□ -1.62
PKP4-212ENST00000483881 ZFYVE1Q9HBF4 777 aa4.91□□□□□ -1.62
PKP4-212ENST00000483881 ACTL7BQ9Y614 415 aa4.91□□□□□ -1.62
PKP4-212ENST00000483881 ZBTB39O15060 712 aa4.9□□□□□ -1.63
PKP4-212ENST00000483881 EIF4EBP3O60516 100 aaPredicted RBP4.9□□□□□ -1.63
PKP4-212ENST00000483881 SNX29Q8TEQ0 813 aa4.9□□□□□ -1.63
PKP4-212ENST00000483881 FBF1Q8TES7 1133 aa4.9□□□□□ -1.63
PKP4-212ENST00000483881 KIRREL1Q96J84 757 aa4.9□□□□□ -1.63
PKP4-212ENST00000483881 FAM129BQ96TA1 746 aa4.9□□□□□ -1.63
PKP4-212ENST00000483881 USP26Q9BXU7 913 aa4.9□□□□□ -1.63
PKP4-212ENST00000483881 ELP3Q9H9T3 547 aa4.9□□□□□ -1.63
PKP4-212ENST00000483881 CCDC87Q9NVE4 849 aa4.9□□□□□ -1.63
PKP4-212ENST00000483881 TREHO43280 583 aa4.89□□□□□ -1.63
PKP4-212ENST00000483881 CPNE3O75131 537 aaKnown RBP4.89□□□□□ -1.63
PKP4-212ENST00000483881 ARL4DP49703 201 aa4.89□□□□□ -1.63
PKP4-212ENST00000483881 CYP27C1Q4G0S4 372 aa4.89□□□□□ -1.63
PKP4-212ENST00000483881 TMC7Q7Z402 723 aa4.89□□□□□ -1.63
PKP4-212ENST00000483881 CEP120Q8N960 986 aa4.89□□□□□ -1.63
PKP4-212ENST00000483881 RGS22Q8NE09 1264 aa4.89□□□□□ -1.63
PKP4-212ENST00000483881 HRASLS5Q96KN8 279 aa4.89□□□□□ -1.63
PKP4-212ENST00000483881 BCL2L13Q9BXK5 485 aa4.89□□□□□ -1.63
PKP4-212ENST00000483881 NLRP2Q9NX02 1062 aa4.89□□□□□ -1.63
PKP4-212ENST00000483881 ABI2Q9NYB9 513 aaPredicted RBP4.89□□□□□ -1.63
PKP4-212ENST00000483881 DISP3Q9P2K9 1392 aa4.89□□□□□ -1.63
PKP4-212ENST00000483881 EIF5BO60841 1220 aaKnown RBP4.88□□□□□ -1.63
PKP4-212ENST00000483881 PHACTR2O75167 634 aa4.88□□□□□ -1.63
PKP4-212ENST00000483881 KIF4AO95239 1232 aa4.88□□□□□ -1.63
PKP4-212ENST00000483881 EDN3P14138 238 aa4.88□□□□□ -1.63
PKP4-212ENST00000483881 XPCQ01831 940 aaPredicted RBP4.88□□□□□ -1.63
PKP4-212ENST00000483881 TRIP4Q15650 581 aaPredicted RBP4.88□□□□□ -1.63
PKP4-212ENST00000483881 IFI16Q16666 785 aaKnown RBP4.88□□□□□ -1.63
PKP4-212ENST00000483881 ATCAYQ86WG3 371 aa4.88□□□□□ -1.63
PKP4-212ENST00000483881 NIF3L1Q9GZT8 377 aa4.88□□□□□ -1.63
PKP4-212ENST00000483881 LGR6Q9HBX8 967 aa4.88□□□□□ -1.63
PKP4-212ENST00000483881 RBM47A0AV96 593 aaKnown RBP4.87□□□□□ -1.63
PKP4-212ENST00000483881 SOX1O00570 391 aaPredicted RBP4.87□□□□□ -1.63
PKP4-212ENST00000483881 ADH5P11766 374 aa4.87□□□□□ -1.63
PKP4-212ENST00000483881 CES1P23141 567 aa4.87□□□□□ -1.63
PKP4-212ENST00000483881 DSC3Q14574 896 aa4.87□□□□□ -1.63
PKP4-212ENST00000483881 DNAJC14Q6Y2X3 702 aaPredicted RBP4.87□□□□□ -1.63
PKP4-212ENST00000483881 KCNN1Q92952 543 aa4.87□□□□□ -1.63
PKP4-212ENST00000483881 SRCIN1Q9C0H9 1055 aa4.87□□□□□ -1.63
PKP4-212ENST00000483881 XYLT2Q9H1B5 865 aa4.87□□□□□ -1.63
PKP4-212ENST00000483881 GGNBP2Q9H3C7 697 aa4.87□□□□□ -1.63
PKP4-212ENST00000483881 ZFYVE28Q9HCC9 887 aa4.87□□□□□ -1.63
PKP4-212ENST00000483881 DCP1AQ9NPI6 582 aaPredicted RBP4.87□□□□□ -1.63
PKP4-212ENST00000483881 FAM105AQ9NUU6 356 aa4.87□□□□□ -1.63
PKP4-212ENST00000483881 PLAGL2Q9UPG8 496 aa4.87□□□□□ -1.63
PKP4-212ENST00000483881 SPG7Q9UQ90 795 aa4.87□□□□□ -1.63
PKP4-212ENST00000483881 TRIM13O60858 407 aa4.86□□□□□ -1.63
PKP4-212ENST00000483881 PRPF40AO75400 957 aaKnown RBP4.86□□□□□ -1.63
PKP4-212ENST00000483881 TNFRSF21O75509 655 aa4.86□□□□□ -1.63
PKP4-212ENST00000483881 MAPK8P45983 427 aa4.86□□□□□ -1.63
PKP4-212ENST00000483881 FMR1Q06787 632 aaKnown RBP eCLIP4.86□□□□□ -1.638e-8■■■■■ 27.8
PKP4-212ENST00000483881 MRS2Q9HD23 443 aa4.86□□□□□ -1.63
PKP4-212ENST00000483881 TRAK1Q9UPV9 953 aa4.86□□□□□ -1.63
PKP4-212ENST00000483881 E9PSI1 815 aa4.85□□□□□ -1.63
PKP4-212ENST00000483881 ZP2Q05996 745 aa4.85□□□□□ -1.63
PKP4-212ENST00000483881 EPB41L4BQ9H329 900 aa4.85□□□□□ -1.63
PKP4-212ENST00000483881 ADAMTS20P59510 1910 aa4.84□□□□□ -1.63
PKP4-212ENST00000483881 TMEM265A0A087WTH1 108 aa4.84□□□□□ -1.63
PKP4-212ENST00000483881 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.84□□□□□ -1.63
PKP4-212ENST00000483881 EIF1AYO14602 144 aaKnown RBP4.84□□□□□ -1.63
PKP4-212ENST00000483881 CYP2E1P05181 493 aaPredicted RBP4.84□□□□□ -1.63
PKP4-212ENST00000483881 LDHBP07195 334 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms