RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 RPS12P25398 132 aaKnown RBP20.3■□□□□ 0.84
MRPL28-210ENST00000483764 CFAP100Q494V2 611 aa20.3■□□□□ 0.84
MRPL28-210ENST00000483764 CDC42EP5Q6NZY7 148 aa20.3■□□□□ 0.84
MRPL28-210ENST00000483764 NEK1Q96PY6 1258 aa20.3■□□□□ 0.84
MRPL28-210ENST00000483764 MKRN1Q9UHC7 482 aaKnown RBP20.3■□□□□ 0.84
MRPL28-210ENST00000483764 CTR9Q6PD62 1173 aa20.29■□□□□ 0.84
MRPL28-210ENST00000483764 STOX1Q6ZVD7 989 aa20.29■□□□□ 0.84
MRPL28-210ENST00000483764 PCDHAC2Q9Y5I4 1007 aa20.29■□□□□ 0.84
MRPL28-210ENST00000483764 CYP46A1Q9Y6A2 500 aa20.29■□□□□ 0.84
MRPL28-210ENST00000483764 MINDY4BA8MYZ0 360 aa20.28■□□□□ 0.84
MRPL28-210ENST00000483764 USP17L12C9JPN9 530 aa20.28■□□□□ 0.84
MRPL28-210ENST00000483764 USP17L21D6R901 530 aa20.28■□□□□ 0.84
MRPL28-210ENST00000483764 MMP14P50281 582 aa20.28■□□□□ 0.84
MRPL28-210ENST00000483764 BLOC1S2Q6QNY1 142 aa20.28■□□□□ 0.84
MRPL28-210ENST00000483764 RUFY3Q7L099 469 aa20.28■□□□□ 0.84
MRPL28-210ENST00000483764 MAPKAPK5Q8IW41 473 aa20.28■□□□□ 0.84
MRPL28-210ENST00000483764 NBPF3Q9H094 633 aa20.28■□□□□ 0.84
MRPL28-210ENST00000483764 MCM9Q9NXL9 1143 aa20.28■□□□□ 0.84
MRPL28-210ENST00000483764 GJA3Q9Y6H8 435 aa20.28■□□□□ 0.84
MRPL28-210ENST00000483764 CPA1P15085 419 aa20.27■□□□□ 0.84
MRPL28-210ENST00000483764 PPARAQ07869 468 aa20.27■□□□□ 0.84
MRPL28-210ENST00000483764 CUL4AQ13619 759 aa20.27■□□□□ 0.84
MRPL28-210ENST00000483764 SBK1Q52WX2 424 aa20.27■□□□□ 0.84
MRPL28-210ENST00000483764 RNF181Q9P0P0 153 aa20.27■□□□□ 0.84
MRPL28-210ENST00000483764 ARPP21Q9UBL0 812 aaPredicted RBP20.27■□□□□ 0.84
MRPL28-210ENST00000483764 ANAPC4Q9UJX5 808 aa20.27■□□□□ 0.84
MRPL28-210ENST00000483764 ZNF541Q9H0D2 1346 aa20.27■□□□□ 0.84
MRPL28-210ENST00000483764 GOLGA6L3A6NEY3 463 aa20.27■□□□□ 0.83
MRPL28-210ENST00000483764 GRIN3BO60391 1043 aa20.27■□□□□ 0.83
MRPL28-210ENST00000483764 WDHD1O75717 1129 aaPredicted RBP20.27■□□□□ 0.83
MRPL28-210ENST00000483764 HMGB1P09429 215 aaKnown RBP20.27■□□□□ 0.83
MRPL28-210ENST00000483764 GMPSP49915 693 aaPredicted RBP20.27■□□□□ 0.83
MRPL28-210ENST00000483764 CTDSPL2Q05D32 466 aa20.27■□□□□ 0.83
MRPL28-210ENST00000483764 DLGAP5Q15398 846 aa20.27■□□□□ 0.83
MRPL28-210ENST00000483764 TBC1D10CQ8IV04 446 aa20.27■□□□□ 0.83
MRPL28-210ENST00000483764 DPF2Q92785 391 aa20.27■□□□□ 0.83
MRPL28-210ENST00000483764 PRMT6Q96LA8 375 aaPredicted RBP20.27■□□□□ 0.83
MRPL28-210ENST00000483764 CYP2D7A0A087X1C5 515 aa20.26■□□□□ 0.83
MRPL28-210ENST00000483764 MTMR14Q8NCE2 650 aa20.26■□□□□ 0.83
MRPL28-210ENST00000483764 FLT1P17948 1338 aa20.26■□□□□ 0.83
MRPL28-210ENST00000483764 FSD2A1L4K1 749 aa20.25■□□□□ 0.83
MRPL28-210ENST00000483764 SPDYE2BA6NHP3 402 aa20.25■□□□□ 0.83
MRPL28-210ENST00000483764 SPDYE6P0CI01 402 aa20.25■□□□□ 0.83
MRPL28-210ENST00000483764 RPS6KB1P23443 525 aa20.25■□□□□ 0.83
MRPL28-210ENST00000483764 ZNF280AP59817 542 aaPredicted RBP20.25■□□□□ 0.83
MRPL28-210ENST00000483764 TRDNQ13061 729 aa20.25■□□□□ 0.83
MRPL28-210ENST00000483764 COL9A3Q14050 684 aaPredicted RBP20.25■□□□□ 0.83
MRPL28-210ENST00000483764 AKNAD1Q5T1N1 836 aa20.25■□□□□ 0.83
MRPL28-210ENST00000483764 C9orf131Q5VYM1 1079 aa20.25■□□□□ 0.83
MRPL28-210ENST00000483764 AMOTL1Q8IY63 956 aa20.25■□□□□ 0.83
MRPL28-210ENST00000483764 NCOA7Q8NI08 942 aa20.25■□□□□ 0.83
MRPL28-210ENST00000483764 PDRG1Q9NUG6 133 aa20.25■□□□□ 0.83
MRPL28-210ENST00000483764 C12orf60Q5U649 245 aa20.24■□□□□ 0.83
MRPL28-210ENST00000483764 MFSD6Q6ZSS7 791 aa20.24■□□□□ 0.83
MRPL28-210ENST00000483764 RALYLQ86SE5 291 aaKnown RBP20.24■□□□□ 0.83
MRPL28-210ENST00000483764 GPC2Q8N158 579 aa20.24■□□□□ 0.83
MRPL28-210ENST00000483764 STAG1Q8WVM7 1258 aa20.24■□□□□ 0.83
MRPL28-210ENST00000483764 TTC14Q96N46 770 aa20.24■□□□□ 0.83
MRPL28-210ENST00000483764 RNF41Q9H4P4 317 aaPredicted RBP20.24■□□□□ 0.83
MRPL28-210ENST00000483764 TDRD3Q9H7E2 651 aaKnown RBP20.24■□□□□ 0.83
MRPL28-210ENST00000483764 SAP30BPQ9UHR5 308 aaKnown RBP20.24■□□□□ 0.83
MRPL28-210ENST00000483764 ADAMTSL1Q8N6G6 1762 aa20.24■□□□□ 0.83
MRPL28-210ENST00000483764 POLR3DP05423 398 aaPredicted RBP20.23■□□□□ 0.83
MRPL28-210ENST00000483764 CYP2D6P10635 497 aa20.23■□□□□ 0.83
MRPL28-210ENST00000483764 PDIA4P13667 645 aaKnown RBP20.23■□□□□ 0.83
MRPL28-210ENST00000483764 PICALMQ13492 652 aa20.23■□□□□ 0.83
MRPL28-210ENST00000483764 DHX32Q7L7V1 743 aaKnown RBP20.23■□□□□ 0.83
MRPL28-210ENST00000483764 IDI2Q9BXS1 227 aa20.23■□□□□ 0.83
MRPL28-210ENST00000483764 MYOZ2Q9NPC6 264 aa20.23■□□□□ 0.83
MRPL28-210ENST00000483764 DDX4Q9NQI0 724 aaKnown RBP20.23■□□□□ 0.83
MRPL28-210ENST00000483764 INCENPQ9NQS7 918 aa20.23■□□□□ 0.83
MRPL28-210ENST00000483764 CNOT7Q9UIV1 285 aaKnown RBP20.23■□□□□ 0.83
MRPL28-210ENST00000483764 SHTN1A0MZ66 631 aa20.22■□□□□ 0.83
MRPL28-210ENST00000483764 SMIM22K7EJ46 135 aa20.22■□□□□ 0.83
MRPL28-210ENST00000483764 SLC3A2P08195 630 aaKnown RBP20.22■□□□□ 0.83
MRPL28-210ENST00000483764 MRE11P49959 708 aa20.22■□□□□ 0.83
MRPL28-210ENST00000483764 NFIAQ12857 509 aa20.22■□□□□ 0.83
MRPL28-210ENST00000483764 MICALL2Q8IY33 904 aa20.22■□□□□ 0.83
MRPL28-210ENST00000483764 CNNM2Q9H8M5 875 aa20.22■□□□□ 0.83
MRPL28-210ENST00000483764 TACC3Q9Y6A5 838 aa20.22■□□□□ 0.83
MRPL28-210ENST00000483764 SBF1O95248 1867 aa20.22■□□□□ 0.83
MRPL28-210ENST00000483764 NPM3O75607 178 aaKnown RBP20.22■□□□□ 0.83
MRPL28-210ENST00000483764 BAG4O95429 457 aaKnown RBP20.22■□□□□ 0.83
MRPL28-210ENST00000483764 PCP11498 1178 aaKnown RBP20.22■□□□□ 0.83
MRPL28-210ENST00000483764 CACNB3P54284 484 aa20.22■□□□□ 0.83
MRPL28-210ENST00000483764 EXOSC10Q01780 885 aaKnown RBP20.22■□□□□ 0.83
MRPL28-210ENST00000483764 STK11IPQ8N1F8 1099 aa20.22■□□□□ 0.83
MRPL28-210ENST00000483764 ZBED3Q96IU2 234 aaPredicted RBP20.22■□□□□ 0.83
MRPL28-210ENST00000483764 KRT23Q9C075 422 aa20.22■□□□□ 0.83
MRPL28-210ENST00000483764 ALDH8A1Q9H2A2 487 aaPredicted RBP20.22■□□□□ 0.83
MRPL28-210ENST00000483764 DICER1Q9UPY3 1922 aaKnown RBP20.21■□□□□ 0.83
MRPL28-210ENST00000483764 NEDD4P46934 1319 aa20.21■□□□□ 0.83
MRPL28-210ENST00000483764 MCM5P33992 734 aa20.21■□□□□ 0.83
MRPL28-210ENST00000483764 AK2P54819 239 aa20.21■□□□□ 0.83
MRPL28-210ENST00000483764 EVX2Q03828 476 aa20.21■□□□□ 0.83
MRPL28-210ENST00000483764 KLHL40Q2TBA0 621 aa20.21■□□□□ 0.83
MRPL28-210ENST00000483764 SLC4A8Q2Y0W8 1093 aa20.21■□□□□ 0.83
MRPL28-210ENST00000483764 MB21D2Q8IYB1 491 aaPredicted RBP20.21■□□□□ 0.83
MRPL28-210ENST00000483764 TMX3Q96JJ7 454 aa20.21■□□□□ 0.83
MRPL28-210ENST00000483764 TCEANC2Q96MN5 208 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms