RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 POLR3DP05423 398 aaPredicted RBP7.37□□□□□ -1.23
NCKAP1-204ENST00000477988 GLI1P08151 1106 aa7.37□□□□□ -1.23
NCKAP1-204ENST00000477988 AFMP43652 599 aa7.37□□□□□ -1.23
NCKAP1-204ENST00000477988 AP3B2Q13367 1082 aa7.37□□□□□ -1.23
NCKAP1-204ENST00000477988 KIAA0319Q5VV43 1072 aa7.37□□□□□ -1.23
NCKAP1-204ENST00000477988 FANCD2OSQ96PS1 177 aa7.37□□□□□ -1.23
NCKAP1-204ENST00000477988 NFIBO00712 420 aa7.36□□□□□ -1.23
NCKAP1-204ENST00000477988 NEFLP07196 543 aa7.36□□□□□ -1.23
NCKAP1-204ENST00000477988 ITPKAP23677 461 aa7.36□□□□□ -1.23
NCKAP1-204ENST00000477988 CTSWP56202 376 aa7.36□□□□□ -1.23
NCKAP1-204ENST00000477988 PTPN12Q05209 780 aaKnown RBP7.36□□□□□ -1.23
NCKAP1-204ENST00000477988 PDE3AQ14432 1141 aa7.36□□□□□ -1.23
NCKAP1-204ENST00000477988 ARHGAP27Q6ZUM4 889 aa7.36□□□□□ -1.23
NCKAP1-204ENST00000477988 SMYD4Q8IYR2 804 aaPredicted RBP7.36□□□□□ -1.23
NCKAP1-204ENST00000477988 ZNF576Q9H609 170 aa7.36□□□□□ -1.23
NCKAP1-204ENST00000477988 CCDC87Q9NVE4 849 aa7.36□□□□□ -1.23
NCKAP1-204ENST00000477988 TMEM88BA6NKF7 163 aa7.35□□□□□ -1.23
NCKAP1-204ENST00000477988 ZP2Q05996 745 aa7.35□□□□□ -1.23
NCKAP1-204ENST00000477988 ASB11Q8WXH4 323 aa7.35□□□□□ -1.23
NCKAP1-204ENST00000477988 ATXN3LQ9H3M9 355 aa7.35□□□□□ -1.23
NCKAP1-204ENST00000477988 PIDD1Q9HB75 910 aa7.35□□□□□ -1.23
NCKAP1-204ENST00000477988 HNRNPUQ00839 825 aaKnown RBP eCLIP7.34□□□□□ -1.23
NCKAP1-204ENST00000477988 FBXO15Q8NCQ5 510 aaPredicted RBP7.34□□□□□ -1.23
NCKAP1-204ENST00000477988 WDR89Q96FK6 387 aaPredicted RBP7.34□□□□□ -1.23
NCKAP1-204ENST00000477988 C20orf173Q96LM9 149 aa7.34□□□□□ -1.23
NCKAP1-204ENST00000477988 DISC1Q9NRI5 854 aa7.34□□□□□ -1.23
NCKAP1-204ENST00000477988 NPIPB6E9PJ23 425 aa7.33□□□□□ -1.24
NCKAP1-204ENST00000477988 SLFN14P0C7P3 912 aa7.33□□□□□ -1.24
NCKAP1-204ENST00000477988 MPZL3Q6UWV2 235 aa7.33□□□□□ -1.24
NCKAP1-204ENST00000477988 FAM214BQ7L5A3 538 aa7.33□□□□□ -1.24
NCKAP1-204ENST00000477988 HEXIM2Q96MH2 286 aaKnown RBP7.33□□□□□ -1.24
NCKAP1-204ENST00000477988 CD320Q9NPF0 282 aa7.33□□□□□ -1.24
NCKAP1-204ENST00000477988 PCDHGC5Q9Y5F6 944 aa7.33□□□□□ -1.24
NCKAP1-204ENST00000477988 LIG1P18858 919 aa7.32□□□□□ -1.24
NCKAP1-204ENST00000477988 ITIH2P19823 946 aa7.32□□□□□ -1.24
NCKAP1-204ENST00000477988 ID3Q02535 119 aa7.32□□□□□ -1.24
NCKAP1-204ENST00000477988 IKZF1Q13422 519 aa7.32□□□□□ -1.24
NCKAP1-204ENST00000477988 RPS26P11Q5JNZ5 115 aaPredicted RBP7.32□□□□□ -1.24
NCKAP1-204ENST00000477988 KIRREL1Q96J84 757 aa7.32□□□□□ -1.24
NCKAP1-204ENST00000477988 HOXA5P20719 270 aa7.31□□□□□ -1.24
NCKAP1-204ENST00000477988 TTLL4Q14679 1199 aa7.31□□□□□ -1.24
NCKAP1-204ENST00000477988 SPACA3Q8IXA5 215 aa7.31□□□□□ -1.24
NCKAP1-204ENST00000477988 EHD4Q9H223 541 aa7.31□□□□□ -1.24
NCKAP1-204ENST00000477988 CCDC86Q9H6F5 360 aaKnown RBP7.31□□□□□ -1.24
NCKAP1-204ENST00000477988 PCOLCE2Q9UKZ9 415 aa7.31□□□□□ -1.24
NCKAP1-204ENST00000477988 KCNA10Q16322 511 aa7.3□□□□□ -1.24
NCKAP1-204ENST00000477988 TMEM67Q5HYA8 995 aa7.3□□□□□ -1.24
NCKAP1-204ENST00000477988 KRT82Q9NSB4 513 aa7.3□□□□□ -1.24
NCKAP1-204ENST00000477988 ZNF862O60290 1169 aa7.29□□□□□ -1.24
NCKAP1-204ENST00000477988 PPP1R15AO75807 674 aaPredicted RBP7.29□□□□□ -1.24
NCKAP1-204ENST00000477988 MED14OSP0DP75 135 aa7.29□□□□□ -1.24
NCKAP1-204ENST00000477988 KIF4BQ2VIQ3 1234 aa7.29□□□□□ -1.24
NCKAP1-204ENST00000477988 CYFIP1Q7L576 1253 aa7.29□□□□□ -1.24
NCKAP1-204ENST00000477988 TOP6BLQ8N6T0 577 aa7.29□□□□□ -1.24
NCKAP1-204ENST00000477988 C19orf73Q9NVV2 129 aa7.29□□□□□ -1.24
NCKAP1-204ENST00000477988 IGF2BP3O00425 579 aaKnown RBP eCLIP7.28□□□□□ -1.24
NCKAP1-204ENST00000477988 ABL1P00519 1130 aa7.28□□□□□ -1.24
NCKAP1-204ENST00000477988 TMEM253P0C7T8 217 aa7.28□□□□□ -1.24
NCKAP1-204ENST00000477988 USPL1Q5W0Q7 1092 aa7.28□□□□□ -1.24
NCKAP1-204ENST00000477988 PHLDB3Q6NSJ2 640 aa7.28□□□□□ -1.24
NCKAP1-204ENST00000477988 PRPF40BQ6NWY9 871 aaKnown RBP7.28□□□□□ -1.24
NCKAP1-204ENST00000477988 NSUN3Q9H649 340 aaKnown RBP7.28□□□□□ -1.24
NCKAP1-204ENST00000477988 EGFL7Q9UHF1 273 aa7.28□□□□□ -1.24
NCKAP1-204ENST00000477988 BRPF3Q9ULD4 1205 aa7.28□□□□□ -1.24
NCKAP1-204ENST00000477988 RNGTTO60942 597 aaKnown RBP7.27□□□□□ -1.25
NCKAP1-204ENST00000477988 CPNE3O75131 537 aaKnown RBP7.27□□□□□ -1.25
NCKAP1-204ENST00000477988 NEFMP07197 916 aa7.27□□□□□ -1.25
NCKAP1-204ENST00000477988 HCLS1P14317 486 aaPredicted RBP7.27□□□□□ -1.25
NCKAP1-204ENST00000477988 NKPD1Q17RQ9 610 aa7.27□□□□□ -1.25
NCKAP1-204ENST00000477988 CIAPIN1Q6FI81 312 aa7.27□□□□□ -1.25
NCKAP1-204ENST00000477988 RELTQ969Z4 430 aa7.27□□□□□ -1.25
NCKAP1-204ENST00000477988 DIRC2Q96SL1 478 aa7.27□□□□□ -1.25
NCKAP1-204ENST00000477988 ABCB6Q9NP58 842 aa7.27□□□□□ -1.25
NCKAP1-204ENST00000477988 PITPNM2Q9BZ72 1349 aa7.27□□□□□ -1.25
NCKAP1-204ENST00000477988 PDE3BQ13370 1112 aa7.26□□□□□ -1.25
NCKAP1-204ENST00000477988 ZNF211Q13398 564 aaPredicted RBP7.26□□□□□ -1.25
NCKAP1-204ENST00000477988 ATG14Q6ZNE5 492 aa7.26□□□□□ -1.25
NCKAP1-204ENST00000477988 KRTAP9-8Q9BYQ0 159 aa7.26□□□□□ -1.25
NCKAP1-204ENST00000477988 NPHS2Q9NP85 383 aa7.26□□□□□ -1.25
NCKAP1-204ENST00000477988 TMEM238LA0A1B0GVL6 79 aa7.25□□□□□ -1.25
NCKAP1-204ENST00000477988 ICMTO60725 284 aa7.25□□□□□ -1.25
NCKAP1-204ENST00000477988 GSTP1P09211 210 aaKnown RBP7.25□□□□□ -1.25
NCKAP1-204ENST00000477988 GLDCP23378 1020 aa7.25□□□□□ -1.25
NCKAP1-204ENST00000477988 GDNFP39905 211 aa7.25□□□□□ -1.25
NCKAP1-204ENST00000477988 ISL2Q96A47 359 aa7.25□□□□□ -1.25
NCKAP1-204ENST00000477988 ANO2Q9NQ90 1003 aa7.25□□□□□ -1.25
NCKAP1-204ENST00000477988 GTF2IRD1Q9UHL9 959 aa7.25□□□□□ -1.25
NCKAP1-204ENST00000477988 TRAK1Q9UPV9 953 aa7.25□□□□□ -1.25
NCKAP1-204ENST00000477988 CITED4Q96RK1 184 aa7.24□□□□□ -1.25
NCKAP1-204ENST00000477988 CSRNP1Q96S65 589 aa7.24□□□□□ -1.25
NCKAP1-204ENST00000477988 ZC3H12CQ9C0D7 883 aaKnown RBP7.24□□□□□ -1.25
NCKAP1-204ENST00000477988 DNAJC25Q9H1X3 360 aa7.24□□□□□ -1.25
NCKAP1-204ENST00000477988 KCNK12Q9HB15 430 aa7.24□□□□□ -1.25
NCKAP1-204ENST00000477988 TCAF2A6NFQ2 919 aa7.23□□□□□ -1.25
NCKAP1-204ENST00000477988 CLCN7P51798 805 aa7.23□□□□□ -1.25
NCKAP1-204ENST00000477988 FAAP100Q0VG06 881 aa7.23□□□□□ -1.25
NCKAP1-204ENST00000477988 FAM129BQ96TA1 746 aa7.23□□□□□ -1.25
NCKAP1-204ENST00000477988 SMG5Q9UPR3 1016 aaKnown RBP7.23□□□□□ -1.25
NCKAP1-204ENST00000477988 ETV2O00321 342 aaPredicted RBP7.22□□□□□ -1.25
NCKAP1-204ENST00000477988 NDUFB5O43674 189 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms