RNA–Protein interactions for RNA: ENST00000477872.1

TMF1-202, Transcript of TATA element modulatory factor 1, humanhuman

TSL 3

Gene TMF1, Length 222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-202ENST00000477872 MTMR3Q13615 1198 aa3.96□□□□□ -1.78
TMF1-202ENST00000477872 KIF4BQ2VIQ3 1234 aa3.96□□□□□ -1.78
TMF1-202ENST00000477872 RPS26P11Q5JNZ5 115 aaPredicted RBP3.96□□□□□ -1.78
TMF1-202ENST00000477872 TTLL10Q6ZVT0 673 aa3.96□□□□□ -1.78
TMF1-202ENST00000477872 SYDE1Q6ZW31 735 aaPredicted RBP3.96□□□□□ -1.78
TMF1-202ENST00000477872 WDR89Q96FK6 387 aaPredicted RBP3.96□□□□□ -1.78
TMF1-202ENST00000477872 LIN37Q96GY3 246 aaPredicted RBP3.96□□□□□ -1.78
TMF1-202ENST00000477872 CCDC86Q9H6F5 360 aaKnown RBP3.96□□□□□ -1.78
TMF1-202ENST00000477872 KRT82Q9NSB4 513 aa3.96□□□□□ -1.78
TMF1-202ENST00000477872 CTNND2Q9UQB3 1225 aa3.96□□□□□ -1.78
TMF1-202ENST00000477872 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.95□□□□□ -1.78
TMF1-202ENST00000477872 GLI1P08151 1106 aa3.95□□□□□ -1.78
TMF1-202ENST00000477872 FKBP4Q02790 459 aaKnown RBP eCLIP3.95□□□□□ -1.78
TMF1-202ENST00000477872 TTLL4Q14679 1199 aa3.95□□□□□ -1.78
TMF1-202ENST00000477872 AMIGO3Q86WK7 504 aa3.95□□□□□ -1.78
TMF1-202ENST00000477872 EHD4Q9H223 541 aa3.95□□□□□ -1.78
TMF1-202ENST00000477872 PRDM7Q9NQW5 492 aa3.95□□□□□ -1.78
TMF1-202ENST00000477872 CCDC87Q9NVE4 849 aa3.95□□□□□ -1.78
TMF1-202ENST00000477872 LMCD1Q9NZU5 365 aa3.95□□□□□ -1.78
TMF1-202ENST00000477872 GTF2IRD1Q9UHL9 959 aa3.95□□□□□ -1.78
TMF1-202ENST00000477872 MTMR7Q9Y216 660 aa3.95□□□□□ -1.78
TMF1-202ENST00000477872 IGF2BP3O00425 579 aaKnown RBP eCLIP3.94□□□□□ -1.78
TMF1-202ENST00000477872 NFIBO00712 420 aa3.94□□□□□ -1.78
TMF1-202ENST00000477872 ZNF862O60290 1169 aa3.94□□□□□ -1.78
TMF1-202ENST00000477872 HCLS1P14317 486 aaPredicted RBP3.94□□□□□ -1.78
TMF1-202ENST00000477872 ITIH2P19823 946 aa3.94□□□□□ -1.78
TMF1-202ENST00000477872 SSFA2P28290 1259 aa3.94□□□□□ -1.78
TMF1-202ENST00000477872 IKZF1Q13422 519 aa3.94□□□□□ -1.78
TMF1-202ENST00000477872 ECM1Q16610 540 aa3.94□□□□□ -1.78
TMF1-202ENST00000477872 TMEM67Q5HYA8 995 aa3.94□□□□□ -1.78
TMF1-202ENST00000477872 FYB2Q5VWT5 728 aa3.94□□□□□ -1.78
TMF1-202ENST00000477872 MPZL3Q6UWV2 235 aa3.94□□□□□ -1.78
TMF1-202ENST00000477872 PRR23BQ6ZRT6 265 aa3.94□□□□□ -1.78
TMF1-202ENST00000477872 FAM214BQ7L5A3 538 aa3.94□□□□□ -1.78
TMF1-202ENST00000477872 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.94□□□□□ -1.78
TMF1-202ENST00000477872 TOP6BLQ8N6T0 577 aa3.94□□□□□ -1.78
TMF1-202ENST00000477872 HEXIM2Q96MH2 286 aaKnown RBP3.94□□□□□ -1.78
TMF1-202ENST00000477872 ZC3H12CQ9C0D7 883 aaKnown RBP3.94□□□□□ -1.78
TMF1-202ENST00000477872 SSU72Q9NP77 194 aaKnown RBP3.94□□□□□ -1.78
TMF1-202ENST00000477872 PCDHGC5Q9Y5F6 944 aa3.94□□□□□ -1.78
TMF1-202ENST00000477872 GSTP1P09211 210 aaKnown RBP3.93□□□□□ -1.78
TMF1-202ENST00000477872 C1QTNF9P0C862 333 aa3.93□□□□□ -1.78
TMF1-202ENST00000477872 CYFIP1Q7L576 1253 aa3.93□□□□□ -1.78
TMF1-202ENST00000477872 FBXO15Q8NCQ5 510 aaPredicted RBP3.93□□□□□ -1.78
TMF1-202ENST00000477872 KIRREL1Q96J84 757 aa3.93□□□□□ -1.78
TMF1-202ENST00000477872 KRT1P04264 644 aa3.92□□□□□ -1.78
TMF1-202ENST00000477872 TMEM253P0C7T8 217 aa3.92□□□□□ -1.78
TMF1-202ENST00000477872 BUD31P41223 144 aaPredicted RBP3.92□□□□□ -1.78
TMF1-202ENST00000477872 USPL1Q5W0Q7 1092 aa3.92□□□□□ -1.78
TMF1-202ENST00000477872 SPACA3Q8IXA5 215 aa3.92□□□□□ -1.78
TMF1-202ENST00000477872 RNF214Q8ND24 703 aa3.92□□□□□ -1.78
TMF1-202ENST00000477872 ISL2Q96A47 359 aa3.92□□□□□ -1.78
TMF1-202ENST00000477872 KRTAP9-3Q9BYQ3 159 aa3.92□□□□□ -1.78
TMF1-202ENST00000477872 TMEM238LA0A1B0GVL6 79 aa3.91□□□□□ -1.78
TMF1-202ENST00000477872 CPNE3O75131 537 aaKnown RBP3.91□□□□□ -1.78
TMF1-202ENST00000477872 NEFMP07197 916 aa3.91□□□□□ -1.78
TMF1-202ENST00000477872 ZNF157P51786 506 aaPredicted RBP3.91□□□□□ -1.78
TMF1-202ENST00000477872 CLCN7P51798 805 aa3.91□□□□□ -1.78
TMF1-202ENST00000477872 ERVK-24P63145 666 aa3.91□□□□□ -1.78
TMF1-202ENST00000477872 PPP2R3AQ06190 1150 aa3.91□□□□□ -1.78
TMF1-202ENST00000477872 NKPD1Q17RQ9 610 aa3.91□□□□□ -1.78
TMF1-202ENST00000477872 ZC3H12AQ5D1E8 599 aaKnown RBP3.91□□□□□ -1.78
TMF1-202ENST00000477872 PRPF40BQ6NWY9 871 aaKnown RBP3.91□□□□□ -1.78
TMF1-202ENST00000477872 ABCB6Q9NP58 842 aa3.91□□□□□ -1.78
TMF1-202ENST00000477872 TRAK1Q9UPV9 953 aa3.91□□□□□ -1.78
TMF1-202ENST00000477872 GNAT3A8MTJ3 354 aa3.9□□□□□ -1.79
TMF1-202ENST00000477872 NPIPB6E9PJ23 425 aa3.9□□□□□ -1.79
TMF1-202ENST00000477872 GDNFP39905 211 aa3.9□□□□□ -1.79
TMF1-202ENST00000477872 CTSWP56202 376 aa3.9□□□□□ -1.79
TMF1-202ENST00000477872 FAAP100Q0VG06 881 aa3.9□□□□□ -1.79
TMF1-202ENST00000477872 KCNB2Q92953 911 aa3.9□□□□□ -1.79
TMF1-202ENST00000477872 CCDC120Q96HB5 630 aa3.9□□□□□ -1.79
TMF1-202ENST00000477872 NPHS2Q9NP85 383 aa3.9□□□□□ -1.79
TMF1-202ENST00000477872 PRDM10Q9NQV6 1147 aa3.9□□□□□ -1.79
TMF1-202ENST00000477872 TMEM39AQ9NV64 488 aa3.9□□□□□ -1.79
TMF1-202ENST00000477872 BRPF3Q9ULD4 1205 aa3.9□□□□□ -1.79
TMF1-202ENST00000477872 PITPNM2Q9BZ72 1349 aa3.9□□□□□ -1.79
TMF1-202ENST00000477872 ABL1P00519 1130 aa3.89□□□□□ -1.79
TMF1-202ENST00000477872 INHBBP09529 407 aa3.89□□□□□ -1.79
TMF1-202ENST00000477872 KCNA10Q16322 511 aa3.89□□□□□ -1.79
TMF1-202ENST00000477872 CIAPIN1Q6FI81 312 aa3.89□□□□□ -1.79
TMF1-202ENST00000477872 PDZD3Q86UT5 571 aa3.89□□□□□ -1.79
TMF1-202ENST00000477872 NPAS4Q8IUM7 802 aa3.89□□□□□ -1.79
TMF1-202ENST00000477872 CCDC97Q96F63 343 aaPredicted RBP3.89□□□□□ -1.79
TMF1-202ENST00000477872 DIRC2Q96SL1 478 aa3.89□□□□□ -1.79
TMF1-202ENST00000477872 NSUN3Q9H649 340 aaKnown RBP3.89□□□□□ -1.79
TMF1-202ENST00000477872 SERPINA10Q9UK55 444 aa3.89□□□□□ -1.79
TMF1-202ENST00000477872 GADD45BO75293 160 aaPredicted RBP3.88□□□□□ -1.79
TMF1-202ENST00000477872 MED14OSP0DP75 135 aa3.88□□□□□ -1.79
TMF1-202ENST00000477872 ARNTP27540 789 aa3.88□□□□□ -1.79
TMF1-202ENST00000477872 PDE3BQ13370 1112 aa3.88□□□□□ -1.79
TMF1-202ENST00000477872 ATG14Q6ZNE5 492 aa3.88□□□□□ -1.79
TMF1-202ENST00000477872 CCDC74AQ96AQ1 378 aa3.88□□□□□ -1.79
TMF1-202ENST00000477872 FOXQ1Q9C009 403 aa3.88□□□□□ -1.79
TMF1-202ENST00000477872 DNAJC25Q9H1X3 360 aa3.88□□□□□ -1.79
TMF1-202ENST00000477872 CARS2Q9HA77 564 aaKnown RBP3.88□□□□□ -1.79
TMF1-202ENST00000477872 CD320Q9NPF0 282 aa3.88□□□□□ -1.79
TMF1-202ENST00000477872 DCP1AQ9NPI6 582 aaPredicted RBP3.88□□□□□ -1.79
TMF1-202ENST00000477872 ANO2Q9NQ90 1003 aa3.88□□□□□ -1.79
TMF1-202ENST00000477872 C19orf73Q9NVV2 129 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms