RNA–Protein interactions for RNA: ENST00000477872.1

TMF1-202, Transcript of TATA element modulatory factor 1, humanhuman

TSL 3

Gene TMF1, Length 222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-202ENST00000477872 AEBP2Q6ZN18 517 aaPredicted RBP15.83■□□□□ 0.12
TMF1-202ENST00000477872 CHIC1Q5VXU3 224 aa14.92□□□□□ -0.02
TMF1-202ENST00000477872 SENP3Q9H4L4 574 aaPredicted RBP13.58□□□□□ -0.24
TMF1-202ENST00000477872 PHF23Q9BUL5 403 aaPredicted RBP13.38□□□□□ -0.27
TMF1-202ENST00000477872 FOXD1Q16676 465 aa12.64□□□□□ -0.39
TMF1-202ENST00000477872 POTEDQ86YR6 584 aa12□□□□□ -0.49
TMF1-202ENST00000477872 MSH5O43196 834 aa11.92□□□□□ -0.5
TMF1-202ENST00000477872 PLPPR3Q6T4P5 718 aa11.87□□□□□ -0.51
TMF1-202ENST00000477872 PIAS4Q8N2W9 510 aaPredicted RBP11.78□□□□□ -0.52
TMF1-202ENST00000477872 PPP6R1Q9UPN7 881 aa11.7□□□□□ -0.54
TMF1-202ENST00000477872 ADRA2BP18089 450 aa11.65□□□□□ -0.54
TMF1-202ENST00000477872 MAPK8IP2Q13387 824 aaPredicted RBP10.75□□□□□ -0.69
TMF1-202ENST00000477872 SCAF1Q9H7N4 1312 aaKnown RBP10.74□□□□□ -0.69
TMF1-202ENST00000477872 DMRT2Q9Y5R5 561 aa10.73□□□□□ -0.69
TMF1-202ENST00000477872 PPP4R3CPQ6ZMV5 832 aa10.37□□□□□ -0.75
TMF1-202ENST00000477872 CACNB1Q02641 598 aaPredicted RBP10.32□□□□□ -0.76
TMF1-202ENST00000477872 DCAF8L1A6NGE4 600 aa10.29□□□□□ -0.76
TMF1-202ENST00000477872 HOXD11P31277 338 aaPredicted RBP10.28□□□□□ -0.76
TMF1-202ENST00000477872 CNKSR2Q8WXI2 1034 aa10.23□□□□□ -0.77
TMF1-202ENST00000477872 RNF216Q9NWF9 866 aaPredicted RBP10.17□□□□□ -0.78
TMF1-202ENST00000477872 RNF39Q9H2S5 420 aa10.14□□□□□ -0.79
TMF1-202ENST00000477872 C1QBPQ07021 282 aaKnown RBP10.02□□□□□ -0.81
TMF1-202ENST00000477872 DNAJC5BQ9UF47 199 aa10□□□□□ -0.81
TMF1-202ENST00000477872 NCBP3Q53F19 620 aaKnown RBP9.97□□□□□ -0.81
TMF1-202ENST00000477872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.81□□□□□ -0.84
TMF1-202ENST00000477872 NPM3O75607 178 aaKnown RBP9.77□□□□□ -0.85
TMF1-202ENST00000477872 U3KPZ7 1027 aaPredicted RBP9.55□□□□□ -0.88
TMF1-202ENST00000477872 CAPN15O75808 1086 aa9.46□□□□□ -0.9
TMF1-202ENST00000477872 SPINK5Q9NQ38 1064 aaPredicted RBP9.45□□□□□ -0.9
TMF1-202ENST00000477872 KCNA4P22459 653 aa9.44□□□□□ -0.9
TMF1-202ENST00000477872 DSG3P32926 999 aa9.44□□□□□ -0.9
TMF1-202ENST00000477872 SLC4A2P04920 1241 aa9.37□□□□□ -0.91
TMF1-202ENST00000477872 APLP2Q06481 763 aa9.34□□□□□ -0.91
TMF1-202ENST00000477872 POTEHQ6S545 545 aa9.33□□□□□ -0.92
TMF1-202ENST00000477872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.29□□□□□ -0.92
TMF1-202ENST00000477872 HNRNPUL2Q1KMD3 747 aaKnown RBP9.29□□□□□ -0.92
TMF1-202ENST00000477872 TRHP20396 242 aaPredicted RBP9.27□□□□□ -0.93
TMF1-202ENST00000477872 ZNF219Q9P2Y4 722 aaPredicted RBP9.27□□□□□ -0.93
TMF1-202ENST00000477872 SAMD1Q6SPF0 538 aaPredicted RBP9.22□□□□□ -0.93
TMF1-202ENST00000477872 ABCB7O75027 752 aa9.2□□□□□ -0.94
TMF1-202ENST00000477872 MYCNP04198 464 aaPredicted RBP9.06□□□□□ -0.96
TMF1-202ENST00000477872 RBM42Q9BTD8 480 aaKnown RBP9.05□□□□□ -0.96
TMF1-202ENST00000477872 POLA2Q14181 598 aa9□□□□□ -0.97
TMF1-202ENST00000477872 SLC4A1APQ9BWU0 796 aaKnown RBP8.9□□□□□ -0.98
TMF1-202ENST00000477872 CHRDL2Q6WN34 429 aa8.88□□□□□ -0.99
TMF1-202ENST00000477872 FOXD4L1Q9NU39 408 aa8.88□□□□□ -0.99
TMF1-202ENST00000477872 ZBTB12Q9Y330 459 aaPredicted RBP8.84□□□□□ -0.99
TMF1-202ENST00000477872 ATF5Q9Y2D1 282 aaPredicted RBP8.82□□□□□ -1
TMF1-202ENST00000477872 AKT1S1Q96B36 256 aa8.81□□□□□ -1
TMF1-202ENST00000477872 REM2Q8IYK8 340 aaPredicted RBP8.7□□□□□ -1.02
TMF1-202ENST00000477872 OSCARQ8IYS5 282 aa8.68□□□□□ -1.02
TMF1-202ENST00000477872 ATXN8OSP0DMR3 200 aa8.66□□□□□ -1.02
TMF1-202ENST00000477872 ZBTB22O15209 634 aa8.65□□□□□ -1.02
TMF1-202ENST00000477872 PIP4P2Q8N4L2 257 aa8.63□□□□□ -1.03
TMF1-202ENST00000477872 SP7Q8TDD2 431 aaPredicted RBP8.62□□□□□ -1.03
TMF1-202ENST00000477872 PITPNM1O00562 1244 aa8.59□□□□□ -1.03
TMF1-202ENST00000477872 FXR2P51116 673 aaKnown RBP eCLIP8.57□□□□□ -1.04
TMF1-202ENST00000477872 SPDYE2BA6NHP3 402 aa8.55□□□□□ -1.04
TMF1-202ENST00000477872 SPDYE6P0CI01 402 aa8.55□□□□□ -1.04
TMF1-202ENST00000477872 FBLN2P98095 1184 aa8.55□□□□□ -1.04
TMF1-202ENST00000477872 SPDYE2Q495Y8 402 aa8.55□□□□□ -1.04
TMF1-202ENST00000477872 HAX1O00165 279 aa8.54□□□□□ -1.04
TMF1-202ENST00000477872 SPDYE1Q8NFV5 336 aaPredicted RBP8.43□□□□□ -1.06
TMF1-202ENST00000477872 MKRN4PQ13434 485 aaPredicted RBP8.42□□□□□ -1.06
TMF1-202ENST00000477872 ZNF692Q9BU19 519 aaPredicted RBP8.41□□□□□ -1.06
TMF1-202ENST00000477872 CLEC11AQ9Y240 323 aa8.4□□□□□ -1.06
TMF1-202ENST00000477872 SSUH2Q9Y2M2 353 aa8.39□□□□□ -1.07
TMF1-202ENST00000477872 PRKAR2AP13861 404 aaKnown RBP8.38□□□□□ -1.07
TMF1-202ENST00000477872 EVX2Q03828 476 aa8.38□□□□□ -1.07
TMF1-202ENST00000477872 C19orf67A6NJJ6 358 aa8.3□□□□□ -1.08
TMF1-202ENST00000477872 PRR29P0C7W0 189 aa8.26□□□□□ -1.09
TMF1-202ENST00000477872 PABPN1Q86U42 306 aaKnown RBP eCLIP8.26□□□□□ -1.09
TMF1-202ENST00000477872 CHADLQ6NUI6 762 aa8.23□□□□□ -1.09
TMF1-202ENST00000477872 GABBR2O75899 941 aa8.21□□□□□ -1.1
TMF1-202ENST00000477872 CSRNP3Q8WYN3 585 aa8.15□□□□□ -1.1
TMF1-202ENST00000477872 FARP1Q9Y4F1 1045 aaPredicted RBP8.13□□□□□ -1.11
TMF1-202ENST00000477872 CD44P16070 742 aaKnown RBP8.1□□□□□ -1.11
TMF1-202ENST00000477872 CLCN6P51797 869 aa8.1□□□□□ -1.11
TMF1-202ENST00000477872 LHX8Q68G74 356 aa8.09□□□□□ -1.11
TMF1-202ENST00000477872 STAG3Q9UJ98 1225 aa8.06□□□□□ -1.12
TMF1-202ENST00000477872 POTEIP0CG38 1075 aa8.01□□□□□ -1.13
TMF1-202ENST00000477872 CREBZFQ9NS37 354 aa8□□□□□ -1.13
TMF1-202ENST00000477872 ZNF579Q8NAF0 562 aaKnown RBP7.98□□□□□ -1.13
TMF1-202ENST00000477872 DCBLD2Q96PD2 775 aa7.98□□□□□ -1.13
TMF1-202ENST00000477872 PLSCR2Q9NRY7 297 aa7.98□□□□□ -1.13
TMF1-202ENST00000477872 SPDYE4A6NLX3 237 aa7.97□□□□□ -1.13
TMF1-202ENST00000477872 ZRANB1Q9UGI0 708 aa7.97□□□□□ -1.13
TMF1-202ENST00000477872 EHMT2Q96KQ7 1210 aa7.93□□□□□ -1.14
TMF1-202ENST00000477872 PAK3O75914 559 aaPredicted RBP7.9□□□□□ -1.14
TMF1-202ENST00000477872 NPM1P06748 294 aaKnown RBP eCLIP7.89□□□□□ -1.15
TMF1-202ENST00000477872 GALR2O43603 387 aaPredicted RBP7.87□□□□□ -1.15
TMF1-202ENST00000477872 MNX1P50219 401 aaPredicted RBP7.83□□□□□ -1.16
TMF1-202ENST00000477872 PHF12Q96QT6 1004 aa7.82□□□□□ -1.16
TMF1-202ENST00000477872 PROM2Q8N271 834 aa7.76□□□□□ -1.17
TMF1-202ENST00000477872 OTUD5Q96G74 571 aa7.76□□□□□ -1.17
TMF1-202ENST00000477872 POTEB2H3BUK9 544 aa7.74□□□□□ -1.17
TMF1-202ENST00000477872 PELP1Q8IZL8 1130 aaKnown RBP7.73□□□□□ -1.17
TMF1-202ENST00000477872 ASTLQ6HA08 431 aaPredicted RBP7.72□□□□□ -1.17
TMF1-202ENST00000477872 MS4A3Q96HJ5 214 aa7.72□□□□□ -1.17
TMF1-202ENST00000477872 ATMINO43313 823 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms