RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 RRP9O43818 475 aaKnown RBP19.12■□□□□ 0.65
TMEM53-208ENST00000476724 GNAT2P19087 354 aa19.12■□□□□ 0.65
TMEM53-208ENST00000476724 DNTTIP2Q5QJE6 756 aaKnown RBP19.12■□□□□ 0.65
TMEM53-208ENST00000476724 SGMS1Q86VZ5 419 aa19.12■□□□□ 0.65
TMEM53-208ENST00000476724 KIAA1524Q8TCG1 905 aa19.12■□□□□ 0.65
TMEM53-208ENST00000476724 CNNM2Q9H8M5 875 aa19.12■□□□□ 0.65
TMEM53-208ENST00000476724 PPFIA3O75145 1194 aa19.11■□□□□ 0.65
TMEM53-208ENST00000476724 KLRK1P26718 216 aa19.11■□□□□ 0.65
TMEM53-208ENST00000476724 LIFRP42702 1097 aa19.11■□□□□ 0.65
TMEM53-208ENST00000476724 ZNF75DP51815 510 aa19.11■□□□□ 0.65
TMEM53-208ENST00000476724 UBE4AQ14139 1066 aa19.11■□□□□ 0.65
TMEM53-208ENST00000476724 IQCB1Q15051 598 aa19.11■□□□□ 0.65
TMEM53-208ENST00000476724 SARM1Q6SZW1 724 aa19.11■□□□□ 0.65
TMEM53-208ENST00000476724 IFNL3Q8IZI9 196 aa19.11■□□□□ 0.65
TMEM53-208ENST00000476724 FMR1NBQ8N0W7 255 aaPredicted RBP19.11■□□□□ 0.65
TMEM53-208ENST00000476724 SPC24Q8NBT2 197 aa19.11■□□□□ 0.65
TMEM53-208ENST00000476724 RGPD3A6NKT7 1758 aaPredicted RBP19.11■□□□□ 0.65
TMEM53-208ENST00000476724 RGPD4Q7Z3J3 1758 aa19.11■□□□□ 0.65
TMEM53-208ENST00000476724 CDC25BP30305 580 aa19.1■□□□□ 0.65
TMEM53-208ENST00000476724 APOA5Q6Q788 366 aa19.1■□□□□ 0.65
TMEM53-208ENST00000476724 MAGEB6Q8N7X4 407 aa19.1■□□□□ 0.65
TMEM53-208ENST00000476724 IGDCC4Q8TDY8 1250 aa19.1■□□□□ 0.65
TMEM53-208ENST00000476724 PRIMPOLQ96LW4 560 aa19.1■□□□□ 0.65
TMEM53-208ENST00000476724 NAPBQ9H115 298 aa19.1■□□□□ 0.65
TMEM53-208ENST00000476724 ZNF804BA4D1E1 1349 aa19.1■□□□□ 0.65
TMEM53-208ENST00000476724 B4E1Z4 1266 aa19.1■□□□□ 0.65
TMEM53-208ENST00000476724 SPTLC2O15270 562 aa19.1■□□□□ 0.65
TMEM53-208ENST00000476724 KIF23Q02241 960 aaPredicted RBP19.1■□□□□ 0.65
TMEM53-208ENST00000476724 OTUD7BQ6GQQ9 843 aa19.1■□□□□ 0.65
TMEM53-208ENST00000476724 KRT23Q9C075 422 aa19.1■□□□□ 0.65
TMEM53-208ENST00000476724 POLR3DP05423 398 aaPredicted RBP19.09■□□□□ 0.65
TMEM53-208ENST00000476724 ST5P78524 1137 aa19.09■□□□□ 0.65
TMEM53-208ENST00000476724 GRAPQ13588 217 aa19.09■□□□□ 0.65
TMEM53-208ENST00000476724 GRAPLQ8TC17 118 aaPredicted RBP19.09■□□□□ 0.65
TMEM53-208ENST00000476724 MTA3Q9BTC8 594 aa19.09■□□□□ 0.65
TMEM53-208ENST00000476724 NACAP1Q9BZK3 213 aa19.09■□□□□ 0.65
TMEM53-208ENST00000476724 NAT10Q9H0A0 1025 aaKnown RBP19.09■□□□□ 0.65
TMEM53-208ENST00000476724 KCNF1Q9H3M0 494 aa19.09■□□□□ 0.65
TMEM53-208ENST00000476724 CLIC4Q9Y696 253 aa19.09■□□□□ 0.65
TMEM53-208ENST00000476724 COL1A1P02452 1464 aaPredicted RBP19.09■□□□□ 0.65
TMEM53-208ENST00000476724 ANKRD31Q8N7Z5 1873 aa19.09■□□□□ 0.65
TMEM53-208ENST00000476724 PNPLA7Q6ZV29 1317 aa19.09■□□□□ 0.65
TMEM53-208ENST00000476724 UQCRHLA0A096LP55 91 aa19.09■□□□□ 0.65
TMEM53-208ENST00000476724 ZBTB43O43298 467 aa19.09■□□□□ 0.65
TMEM53-208ENST00000476724 UQCRHP07919 91 aa19.09■□□□□ 0.65
TMEM53-208ENST00000476724 ANO1Q5XXA6 986 aa19.09■□□□□ 0.65
TMEM53-208ENST00000476724 FAM84BQ96KN1 310 aaPredicted RBP19.09■□□□□ 0.65
TMEM53-208ENST00000476724 ALG1Q9BT22 464 aa19.09■□□□□ 0.65
TMEM53-208ENST00000476724 CHD4Q14839 1912 aa19.08■□□□□ 0.64
TMEM53-208ENST00000476724 DYNC1I1O14576 645 aa19.08■□□□□ 0.64
TMEM53-208ENST00000476724 MBD4O95243 580 aa19.08■□□□□ 0.64
TMEM53-208ENST00000476724 CRY2Q49AN0 593 aa19.08■□□□□ 0.64
TMEM53-208ENST00000476724 DRC7Q8IY82 874 aa19.08■□□□□ 0.64
TMEM53-208ENST00000476724 SDF4Q9BRK5 362 aa19.08■□□□□ 0.64
TMEM53-208ENST00000476724 HSP90AA2PQ14568 343 aaPredicted RBP19.07■□□□□ 0.64
TMEM53-208ENST00000476724 EZH2Q15910 746 aaKnown RBP19.07■□□□□ 0.64
TMEM53-208ENST00000476724 TMEM67Q5HYA8 995 aa19.07■□□□□ 0.64
TMEM53-208ENST00000476724 AKNAD1Q5T1N1 836 aa19.07■□□□□ 0.64
TMEM53-208ENST00000476724 NFXL1Q6ZNB6 911 aa19.07■□□□□ 0.64
TMEM53-208ENST00000476724 LY9Q9HBG7 655 aa19.07■□□□□ 0.64
TMEM53-208ENST00000476724 NEDD4P46934 1319 aa19.07■□□□□ 0.64
TMEM53-208ENST00000476724 MYH13Q9UKX3 1938 aa19.07■□□□□ 0.64
TMEM53-208ENST00000476724 BECN2A8MW95 431 aa19.07■□□□□ 0.64
TMEM53-208ENST00000476724 HMGB2P26583 209 aaKnown RBP19.07■□□□□ 0.64
TMEM53-208ENST00000476724 RAB11FIP4Q86YS3 637 aa19.07■□□□□ 0.64
TMEM53-208ENST00000476724 CEP57L1Q8IYX8 460 aa19.07■□□□□ 0.64
TMEM53-208ENST00000476724 MRFAP1L1Q96HT8 127 aa19.07■□□□□ 0.64
TMEM53-208ENST00000476724 ANKRD2Q9GZV1 360 aa19.07■□□□□ 0.64
TMEM53-208ENST00000476724 DENND2AQ9ULE3 1009 aa19.07■□□□□ 0.64
TMEM53-208ENST00000476724 TIAM2Q8IVF5 1701 aa19.07■□□□□ 0.64
TMEM53-208ENST00000476724 STK36Q9NRP7 1315 aa19.06■□□□□ 0.64
TMEM53-208ENST00000476724 NRXN2Q9P2S2 1712 aa19.06■□□□□ 0.64
TMEM53-208ENST00000476724 GSG1L2A8MUP6 293 aa19.06■□□□□ 0.64
TMEM53-208ENST00000476724 CMA1P23946 247 aa19.06■□□□□ 0.64
TMEM53-208ENST00000476724 IARSP41252 1262 aaKnown RBP19.06■□□□□ 0.64
TMEM53-208ENST00000476724 EN1Q05925 392 aaPredicted RBP19.06■□□□□ 0.64
TMEM53-208ENST00000476724 MFSD6Q6ZSS7 791 aa19.06■□□□□ 0.64
TMEM53-208ENST00000476724 C11orf57Q6ZUT1 292 aaPredicted RBP19.06■□□□□ 0.64
TMEM53-208ENST00000476724 CCDC186Q7Z3E2 898 aa19.06■□□□□ 0.64
TMEM53-208ENST00000476724 RPGRQ92834 1020 aaKnown RBP19.06■□□□□ 0.64
TMEM53-208ENST00000476724 EPB41L4AQ9HCS5 686 aaPredicted RBP19.06■□□□□ 0.64
TMEM53-208ENST00000476724 ZSWIM5Q9P217 1185 aa19.06■□□□□ 0.64
TMEM53-208ENST00000476724 A0A1B0GVL5 298 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 PTGS1P23219 599 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 TRIM29Q14134 588 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 SLC39A14Q15043 492 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 NTRK3Q16288 839 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 CAVIN4Q5BKX8 364 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 TXNRD3Q86VQ6 643 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 TMTC2Q8N394 836 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 JMYQ8N9B5 988 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 STAG1Q8WVM7 1258 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 WASF1Q92558 559 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 ARMT1Q9H993 441 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 SLC12A7Q9Y666 1083 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 NID2Q14112 1375 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 CCDC69A6NI79 296 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 GOLGA8AA7E2F4 631 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 KIF28PB7ZC32 967 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 IFIT3O14879 490 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms