RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 SRCAPQ6ZRS2 3230 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 SPDYE2BA6NHP3 402 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 USP17L12C9JPN9 530 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 USP17L21D6R901 530 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 WDHD1O75717 1129 aaPredicted RBP10.32□□□□□ -0.76
HDLBP-233ENST00000470710 CD2BP2O95400 341 aaKnown RBP10.32□□□□□ -0.76
HDLBP-233ENST00000470710 USP17L8P0C7I0 530 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 SPDYE6P0CI01 402 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 NT5C2P49902 561 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 ZNF280AP59817 542 aaPredicted RBP10.32□□□□□ -0.76
HDLBP-233ENST00000470710 CFAP100Q494V2 611 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 AKNAD1Q5T1N1 836 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 DHX32Q7L7V1 743 aaKnown RBP10.32□□□□□ -0.76
HDLBP-233ENST00000470710 IDI2Q9BXS1 227 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 CNNM2Q9H8M5 875 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 PDRG1Q9NUG6 133 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 USP40Q9NVE5 1235 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 MCM9Q9NXL9 1143 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 ZBTB12Q9Y330 459 aaPredicted RBP10.32□□□□□ -0.76
HDLBP-233ENST00000470710 PSME4Q14997 1843 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 FLT1P17948 1338 aa10.32□□□□□ -0.76
HDLBP-233ENST00000470710 ROBO3Q96MS0 1386 aa10.31□□□□□ -0.76
HDLBP-233ENST00000470710 K7ELQ4 463 aaPredicted RBP10.31□□□□□ -0.76
HDLBP-233ENST00000470710 GRIN3BO60391 1043 aa10.31□□□□□ -0.76
HDLBP-233ENST00000470710 SLC3A2P08195 630 aaKnown RBP10.31□□□□□ -0.76
HDLBP-233ENST00000470710 FGRP09769 529 aa10.31□□□□□ -0.76
HDLBP-233ENST00000470710 RBM5P52756 815 aaKnown RBP eCLIP10.31□□□□□ -0.76
HDLBP-233ENST00000470710 EXOSC10Q01780 885 aaKnown RBP10.31□□□□□ -0.76
HDLBP-233ENST00000470710 C1QBPQ07021 282 aaKnown RBP10.31□□□□□ -0.76
HDLBP-233ENST00000470710 TRDNQ13061 729 aa10.31□□□□□ -0.76
HDLBP-233ENST00000470710 C12orf60Q5U649 245 aa10.31□□□□□ -0.76
HDLBP-233ENST00000470710 MFSD6Q6ZSS7 791 aa10.31□□□□□ -0.76
HDLBP-233ENST00000470710 RALYLQ86SE5 291 aaKnown RBP10.31□□□□□ -0.76
HDLBP-233ENST00000470710 MAPKAPK5Q8IW41 473 aa10.31□□□□□ -0.76
HDLBP-233ENST00000470710 AMOTL1Q8IY63 956 aa10.31□□□□□ -0.76
HDLBP-233ENST00000470710 MB21D2Q8IYB1 491 aaPredicted RBP10.31□□□□□ -0.76
HDLBP-233ENST00000470710 FBXL16Q8N461 479 aa10.31□□□□□ -0.76
HDLBP-233ENST00000470710 NCOA7Q8NI08 942 aa10.31□□□□□ -0.76
HDLBP-233ENST00000470710 ZBED3Q96IU2 234 aaPredicted RBP10.31□□□□□ -0.76
HDLBP-233ENST00000470710 KRT23Q9C075 422 aa10.31□□□□□ -0.76
HDLBP-233ENST00000470710 MYH2Q9UKX2 1941 aa10.31□□□□□ -0.76
HDLBP-233ENST00000470710 ZNF541Q9H0D2 1346 aa10.31□□□□□ -0.76
HDLBP-233ENST00000470710 TIAM2Q8IVF5 1701 aa10.3□□□□□ -0.76
HDLBP-233ENST00000470710 MINDY4BA8MYZ0 360 aa10.3□□□□□ -0.76
HDLBP-233ENST00000470710 ORC4O43929 436 aa10.3□□□□□ -0.76
HDLBP-233ENST00000470710 CPA1P15085 419 aa10.3□□□□□ -0.76
HDLBP-233ENST00000470710 MCM5P33992 734 aa10.3□□□□□ -0.76
HDLBP-233ENST00000470710 GMPSP49915 693 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-233ENST00000470710 CTDSPL2Q05D32 466 aa10.3□□□□□ -0.76
HDLBP-233ENST00000470710 COL9A3Q14050 684 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-233ENST00000470710 ANKRD1Q15327 319 aa10.3□□□□□ -0.76
HDLBP-233ENST00000470710 DLGAP5Q15398 846 aa10.3□□□□□ -0.76
HDLBP-233ENST00000470710 FKBP1CQ5VVH2 108 aa10.3□□□□□ -0.76
HDLBP-233ENST00000470710 MTA3Q9BTC8 594 aa10.3□□□□□ -0.76
HDLBP-233ENST00000470710 AGXT2Q9BYV1 514 aa10.3□□□□□ -0.76
HDLBP-233ENST00000470710 DDX4Q9NQI0 724 aaKnown RBP10.3□□□□□ -0.76
HDLBP-233ENST00000470710 DAXXQ9UER7 740 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-233ENST00000470710 TAOK2Q9UL54 1235 aa10.3□□□□□ -0.76
HDLBP-233ENST00000470710 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.3□□□□□ -0.76
HDLBP-233ENST00000470710 PCDHAC2Q9Y5I4 1007 aa10.3□□□□□ -0.76
HDLBP-233ENST00000470710 TACC3Q9Y6A5 838 aa10.3□□□□□ -0.76
HDLBP-233ENST00000470710 NEDD4P46934 1319 aa10.3□□□□□ -0.76
HDLBP-233ENST00000470710 CYP2D7A0A087X1C5 515 aa10.29□□□□□ -0.76
HDLBP-233ENST00000470710 POLR3DP05423 398 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-233ENST00000470710 CYP2D6P10635 497 aa10.29□□□□□ -0.76
HDLBP-233ENST00000470710 AK2P54819 239 aa10.29□□□□□ -0.76
HDLBP-233ENST00000470710 GPR162Q16538 588 aa10.29□□□□□ -0.76
HDLBP-233ENST00000470710 SPDYE2Q495Y8 402 aa10.29□□□□□ -0.76
HDLBP-233ENST00000470710 C9orf131Q5VYM1 1079 aa10.29□□□□□ -0.76
HDLBP-233ENST00000470710 GPC2Q8N158 579 aa10.29□□□□□ -0.76
HDLBP-233ENST00000470710 PRMT6Q96LA8 375 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-233ENST00000470710 OSBPL5Q9H0X9 879 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-233ENST00000470710 MYOZ2Q9NPC6 264 aa10.29□□□□□ -0.76
HDLBP-233ENST00000470710 TMOD2Q9NZR1 351 aa10.29□□□□□ -0.76
HDLBP-233ENST00000470710 RNF181Q9P0P0 153 aa10.29□□□□□ -0.76
HDLBP-233ENST00000470710 LIMCH1Q9UPQ0 1083 aa10.29□□□□□ -0.76
HDLBP-233ENST00000470710 ZC3H4Q9UPT8 1303 aaKnown RBP10.29□□□□□ -0.76
HDLBP-233ENST00000470710 LAMA4Q16363 1823 aa10.28□□□□□ -0.76
HDLBP-233ENST00000470710 B4E1Z4 1266 aa10.28□□□□□ -0.76
HDLBP-233ENST00000470710 PRC1O43663 620 aa10.28□□□□□ -0.76
HDLBP-233ENST00000470710 ENTPD3O75355 529 aa10.28□□□□□ -0.76
HDLBP-233ENST00000470710 ANTXR2P58335 489 aa10.28□□□□□ -0.76
HDLBP-233ENST00000470710 PDE4BQ07343 736 aa10.28□□□□□ -0.76
HDLBP-233ENST00000470710 NFIAQ12857 509 aa10.28□□□□□ -0.76
HDLBP-233ENST00000470710 TOB2Q14106 344 aaPredicted RBP10.28□□□□□ -0.76
HDLBP-233ENST00000470710 C16orf86Q6ZW13 317 aa10.28□□□□□ -0.76
HDLBP-233ENST00000470710 TTC6Q86TZ1 520 aa10.28□□□□□ -0.76
HDLBP-233ENST00000470710 MICALL2Q8IY33 904 aa10.28□□□□□ -0.76
HDLBP-233ENST00000470710 ESR2Q92731 530 aa10.28□□□□□ -0.76
HDLBP-233ENST00000470710 TMX3Q96JJ7 454 aa10.28□□□□□ -0.76
HDLBP-233ENST00000470710 ZSCAN31Q96LW9 406 aaPredicted RBP10.28□□□□□ -0.76
HDLBP-233ENST00000470710 DHX36Q9H2U1 1008 aaKnown RBP10.28□□□□□ -0.76
HDLBP-233ENST00000470710 TDRD3Q9H7E2 651 aaKnown RBP10.28□□□□□ -0.76
HDLBP-233ENST00000470710 ZNF287Q9HBT7 754 aa10.28□□□□□ -0.76
HDLBP-233ENST00000470710 SH2B1Q9NRF2 756 aaPredicted RBP10.28□□□□□ -0.76
HDLBP-233ENST00000470710 ZNF70Q9UC06 446 aaPredicted RBP10.28□□□□□ -0.76
HDLBP-233ENST00000470710 FAM198AQ9UFP1 575 aa10.28□□□□□ -0.76
HDLBP-233ENST00000470710 SAP30BPQ9UHR5 308 aaKnown RBP10.28□□□□□ -0.76
HDLBP-233ENST00000470710 GJA3Q9Y6H8 435 aa10.28□□□□□ -0.76
HDLBP-233ENST00000470710 COL2A1P02458 1487 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms