RNA–Protein interactions for RNA: ENST00000467661.5

NELFA-213, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best)

Gene NELFA, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-213ENST00000467661 CACNA1SQ13698 1873 aa20.48■□□□□ 0.87
NELFA-213ENST00000467661 TRIM29Q14134 588 aa20.48■□□□□ 0.87
NELFA-213ENST00000467661 OTUD7BQ6GQQ9 843 aa20.48■□□□□ 0.87
NELFA-213ENST00000467661 FSIP1Q8NA03 581 aa20.48■□□□□ 0.87
NELFA-213ENST00000467661 LINC00301Q8NCQ3 95 aa20.48■□□□□ 0.87
NELFA-213ENST00000467661 WASF1Q92558 559 aa20.48■□□□□ 0.87
NELFA-213ENST00000467661 IQSEC3Q9UPP2 1182 aaPredicted RBP20.48■□□□□ 0.87
NELFA-213ENST00000467661 COL1A1P02452 1464 aaPredicted RBP20.48■□□□□ 0.87
NELFA-213ENST00000467661 APBA3O96018 575 aa20.47■□□□□ 0.87
NELFA-213ENST00000467661 RCAN1P53805 252 aa20.47■□□□□ 0.87
NELFA-213ENST00000467661 PPARAQ07869 468 aa20.47■□□□□ 0.87
NELFA-213ENST00000467661 WTAPQ15007 396 aa20.47■□□□□ 0.87
NELFA-213ENST00000467661 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.47■□□□□ 0.87
NELFA-213ENST00000467661 NKX2-3Q8TAU0 364 aa20.47■□□□□ 0.87
NELFA-213ENST00000467661 FAM84BQ96KN1 310 aaPredicted RBP20.47■□□□□ 0.87
NELFA-213ENST00000467661 TOMM22Q9NS69 142 aa20.47■□□□□ 0.87
NELFA-213ENST00000467661 SRP68Q9UHB9 627 aaKnown RBP20.47■□□□□ 0.87
NELFA-213ENST00000467661 ANAPC4Q9UJX5 808 aa20.47■□□□□ 0.87
NELFA-213ENST00000467661 MAST2Q6P0Q8 1798 aa20.47■□□□□ 0.87
NELFA-213ENST00000467661 POLR3DP05423 398 aaPredicted RBP20.47■□□□□ 0.87
NELFA-213ENST00000467661 TPM3P06753 285 aa20.47■□□□□ 0.87
NELFA-213ENST00000467661 CDC27P30260 824 aa20.47■□□□□ 0.87
NELFA-213ENST00000467661 PLCB2Q00722 1185 aa20.47■□□□□ 0.87
NELFA-213ENST00000467661 SSRP1Q08945 709 aaKnown RBP20.47■□□□□ 0.87
NELFA-213ENST00000467661 RRP12Q5JTH9 1297 aaKnown RBP20.47■□□□□ 0.87
NELFA-213ENST00000467661 TMED8Q6PL24 325 aaPredicted RBP20.47■□□□□ 0.87
NELFA-213ENST00000467661 FBXO33Q7Z6M2 555 aa20.47■□□□□ 0.87
NELFA-213ENST00000467661 CCDC125Q86Z20 511 aa20.47■□□□□ 0.87
NELFA-213ENST00000467661 NAP1L5Q96NT1 182 aaPredicted RBP20.47■□□□□ 0.87
NELFA-213ENST00000467661 GOLPH3LQ9H4A5 285 aa20.47■□□□□ 0.87
NELFA-213ENST00000467661 PCDHA7Q9UN72 937 aa20.47■□□□□ 0.87
NELFA-213ENST00000467661 GOLGA6L6A8MZA4 724 aa20.46■□□□□ 0.87
NELFA-213ENST00000467661 PLSCR1O15162 318 aa20.46■□□□□ 0.87
NELFA-213ENST00000467661 SNW1Q13573 536 aaKnown RBP20.46■□□□□ 0.87
NELFA-213ENST00000467661 GNL2Q13823 731 aaKnown RBP20.46■□□□□ 0.87
NELFA-213ENST00000467661 NTRK3Q16288 839 aa20.46■□□□□ 0.87
NELFA-213ENST00000467661 ENGASEQ8NFI3 743 aa20.46■□□□□ 0.87
NELFA-213ENST00000467661 CBX8Q9HC52 389 aa20.46■□□□□ 0.87
NELFA-213ENST00000467661 CCDC196A0A1B0GTZ2 297 aa20.45■□□□□ 0.86
NELFA-213ENST00000467661 SPTLC2O15270 562 aa20.45■□□□□ 0.86
NELFA-213ENST00000467661 RXRAP19793 462 aa20.45■□□□□ 0.86
NELFA-213ENST00000467661 BRIP1Q9BX63 1249 aa20.45■□□□□ 0.86
NELFA-213ENST00000467661 SENP2Q9HC62 589 aa20.45■□□□□ 0.86
NELFA-213ENST00000467661 INCENPQ9NQS7 918 aa20.45■□□□□ 0.86
NELFA-213ENST00000467661 CLIC4Q9Y696 253 aa20.45■□□□□ 0.86
NELFA-213ENST00000467661 ZBTB22O15209 634 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 OFD1O75665 1012 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 FMNL1O95466 1100 aaPredicted RBP20.44■□□□□ 0.86
NELFA-213ENST00000467661 PCP11498 1178 aaKnown RBP20.44■□□□□ 0.86
NELFA-213ENST00000467661 IFNAR1P17181 557 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 KIAA2012Q0VF49 1180 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 STX1AQ16623 288 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 ANO1Q5XXA6 986 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 KRT40Q6A162 431 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 ADGRA1Q86SQ6 560 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 TDRD7Q8NHU6 1098 aaKnown RBP20.44■□□□□ 0.86
NELFA-213ENST00000467661 ESR2Q92731 530 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 UPF1Q92900 1129 aaKnown RBP eCLIP20.44■□□□□ 0.86
NELFA-213ENST00000467661 PHKBQ93100 1093 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 RIOK1Q9BRS2 568 aaKnown RBP20.44■□□□□ 0.86
NELFA-213ENST00000467661 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.44■□□□□ 0.86
NELFA-213ENST00000467661 KIF28PB7ZC32 967 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 ZNF165P49910 485 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 CCDC144CPQ8IYA2 1237 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 TRIM22Q8IYM9 498 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 UBAC1Q9BSL1 405 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 FAM217BQ9NTX9 383 aaPredicted RBP20.44■□□□□ 0.86
NELFA-213ENST00000467661 TACC3Q9Y6A5 838 aa20.44■□□□□ 0.86
NELFA-213ENST00000467661 HIBADHP31937 336 aaKnown RBP20.43■□□□□ 0.86
NELFA-213ENST00000467661 SF3B2Q13435 895 aaKnown RBP20.43■□□□□ 0.86
NELFA-213ENST00000467661 PPP2R5BQ15173 497 aa20.43■□□□□ 0.86
NELFA-213ENST00000467661 RTN1Q16799 776 aa20.43■□□□□ 0.86
NELFA-213ENST00000467661 LUZP1Q86V48 1076 aa20.43■□□□□ 0.86
NELFA-213ENST00000467661 ARHGEF1Q92888 912 aaKnown RBP20.43■□□□□ 0.86
NELFA-213ENST00000467661 MINDY4BA8MYZ0 360 aa20.42■□□□□ 0.86
NELFA-213ENST00000467661 NPHP1O15259 732 aa20.42■□□□□ 0.86
NELFA-213ENST00000467661 FMR1NBQ8N0W7 255 aaPredicted RBP20.42■□□□□ 0.86
NELFA-213ENST00000467661 JMYQ8N9B5 988 aa20.42■□□□□ 0.86
NELFA-213ENST00000467661 SDR42E1Q8WUS8 393 aa20.42■□□□□ 0.86
NELFA-213ENST00000467661 MYL10Q9BUA6 226 aa20.42■□□□□ 0.86
NELFA-213ENST00000467661 SLC26A6Q9BXS9 759 aa20.42■□□□□ 0.86
NELFA-213ENST00000467661 GJB4Q9NTQ9 266 aa20.42■□□□□ 0.86
NELFA-213ENST00000467661 DUOX1Q9NRD9 1551 aa20.42■□□□□ 0.86
NELFA-213ENST00000467661 CCDC88AQ3V6T2 1871 aa20.42■□□□□ 0.86
NELFA-213ENST00000467661 RANBP6O60518 1105 aaKnown RBP20.41■□□□□ 0.86
NELFA-213ENST00000467661 IGSF3O75054 1194 aa20.41■□□□□ 0.86
NELFA-213ENST00000467661 RFC4P35249 363 aa20.41■□□□□ 0.86
NELFA-213ENST00000467661 SMIM5Q71RC9 77 aa20.41■□□□□ 0.86
NELFA-213ENST00000467661 DNAJC25Q9H1X3 360 aa20.41■□□□□ 0.86
NELFA-213ENST00000467661 ANO10Q9NW15 660 aa20.41■□□□□ 0.86
NELFA-213ENST00000467661 U2AF2P26368 475 aaKnown RBP eCLIP20.41■□□□□ 0.86
NELFA-213ENST00000467661 SLC39A14Q15043 492 aa20.41■□□□□ 0.86
NELFA-213ENST00000467661 SAFBQ15424 915 aaKnown RBP eCLIP20.41■□□□□ 0.86
NELFA-213ENST00000467661 TRAPPC3LQ5T215 181 aa20.41■□□□□ 0.86
NELFA-213ENST00000467661 PROM2Q8N271 834 aa20.41■□□□□ 0.86
NELFA-213ENST00000467661 GOLGA6L19H0YKK7 550 aa20.4■□□□□ 0.86
NELFA-213ENST00000467661 AP5Z1O43299 807 aa20.4■□□□□ 0.86
NELFA-213ENST00000467661 PPP6R2O75170 966 aa20.4■□□□□ 0.86
NELFA-213ENST00000467661 AIFM3Q96NN9 605 aa20.4■□□□□ 0.86
NELFA-213ENST00000467661 KIAA1551Q9HCM1 1747 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms