RNA–Protein interactions for RNA: ENST00000460625.1

UPK1B-202, Transcript of uroplakin 1B, humanhuman

TSL 1 (best) BASIC

Gene UPK1B, Length 1,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-202ENST00000460625 AKNAD1Q5T1N1 836 aa12.89□□□□□ -0.35
UPK1B-202ENST00000460625 CYB5R4Q7L1T6 521 aa12.89□□□□□ -0.35
UPK1B-202ENST00000460625 SLF2Q8IX21 1173 aa12.89□□□□□ -0.35
UPK1B-202ENST00000460625 NOL10Q9BSC4 688 aaKnown RBP12.89□□□□□ -0.35
UPK1B-202ENST00000460625 ATP8A2Q9NTI2 1148 aa12.89□□□□□ -0.35
UPK1B-202ENST00000460625 USP5P45974 858 aa12.88□□□□□ -0.35
UPK1B-202ENST00000460625 RASSF7Q02833 373 aa12.88□□□□□ -0.35
UPK1B-202ENST00000460625 RALYLQ86SE5 291 aaKnown RBP12.88□□□□□ -0.35
UPK1B-202ENST00000460625 MAPKAPK5Q8IW41 473 aa12.88□□□□□ -0.35
UPK1B-202ENST00000460625 STAG1Q8WVM7 1258 aa12.88□□□□□ -0.35
UPK1B-202ENST00000460625 BRF1Q92994 677 aa12.88□□□□□ -0.35
UPK1B-202ENST00000460625 ANAPC4Q9UJX5 808 aa12.88□□□□□ -0.35
UPK1B-202ENST00000460625 FOCADQ5VW36 1801 aa12.88□□□□□ -0.35
UPK1B-202ENST00000460625 PSMD14O00487 310 aa12.88□□□□□ -0.35
UPK1B-202ENST00000460625 PRC1O43663 620 aa12.88□□□□□ -0.35
UPK1B-202ENST00000460625 CRKP46108 304 aa12.88□□□□□ -0.35
UPK1B-202ENST00000460625 APOBEC3HQ6NTF7 200 aaKnown RBP12.88□□□□□ -0.35
UPK1B-202ENST00000460625 TEX11Q8IYF3 940 aa12.88□□□□□ -0.35
UPK1B-202ENST00000460625 NECAB1Q8N987 351 aa12.88□□□□□ -0.35
UPK1B-202ENST00000460625 AGXT2Q9BYV1 514 aa12.88□□□□□ -0.35
UPK1B-202ENST00000460625 VPS33BQ9H267 617 aa12.88□□□□□ -0.35
UPK1B-202ENST00000460625 MCM9Q9NXL9 1143 aa12.88□□□□□ -0.35
UPK1B-202ENST00000460625 DDX60LQ5H9U9 1706 aaKnown RBP12.87□□□□□ -0.35
UPK1B-202ENST00000460625 MCM5P33992 734 aa12.87□□□□□ -0.35
UPK1B-202ENST00000460625 TRDNQ13061 729 aa12.87□□□□□ -0.35
UPK1B-202ENST00000460625 ANKRD1Q15327 319 aa12.87□□□□□ -0.35
UPK1B-202ENST00000460625 HHIPL2Q6UWX4 724 aa12.87□□□□□ -0.35
UPK1B-202ENST00000460625 MFSD6Q6ZSS7 791 aa12.87□□□□□ -0.35
UPK1B-202ENST00000460625 NIM1KQ8IY84 436 aa12.87□□□□□ -0.35
UPK1B-202ENST00000460625 TEKT1Q969V4 418 aa12.87□□□□□ -0.35
UPK1B-202ENST00000460625 SAP30BPQ9UHR5 308 aaKnown RBP12.87□□□□□ -0.35
UPK1B-202ENST00000460625 ZNRF3Q9ULT6 936 aa12.87□□□□□ -0.35
UPK1B-202ENST00000460625 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
UPK1B-202ENST00000460625 KDM4AO75164 1064 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 APOBRQ0VD83 1088 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 SBK1Q52WX2 424 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 RRP12Q5JTH9 1297 aaKnown RBP12.86□□□□□ -0.35
UPK1B-202ENST00000460625 RSBN1LQ6PCB5 846 aaPredicted RBP12.86□□□□□ -0.35
UPK1B-202ENST00000460625 CCDC83Q8IWF9 413 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 ARPP21Q9UBL0 812 aaPredicted RBP12.86□□□□□ -0.35
UPK1B-202ENST00000460625 FLT1P17948 1338 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 ECM29Q5VYK3 1845 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 MYH1P12882 1939 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 PRDM1O75626 825 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 WDHD1O75717 1129 aaPredicted RBP12.86□□□□□ -0.35
UPK1B-202ENST00000460625 VIL1P09327 827 aaKnown RBP12.86□□□□□ -0.35
UPK1B-202ENST00000460625 PLCG2P16885 1265 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 FGD1P98174 961 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 STK3Q13188 491 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 CDC42EP5Q6NZY7 148 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 ZSCAN31Q96LW9 406 aaPredicted RBP12.86□□□□□ -0.35
UPK1B-202ENST00000460625 ZDHHC15Q96MV8 337 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 SENP2Q9HC62 589 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 DDX4Q9NQI0 724 aaKnown RBP12.86□□□□□ -0.35
UPK1B-202ENST00000460625 TOMM22Q9NS69 142 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 USP40Q9NVE5 1235 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 ZSWIM5Q9P217 1185 aa12.86□□□□□ -0.35
UPK1B-202ENST00000460625 PLCD1P51178 756 aa12.85□□□□□ -0.35
UPK1B-202ENST00000460625 CXCL9Q07325 125 aa12.85□□□□□ -0.35
UPK1B-202ENST00000460625 PICALMQ13492 652 aa12.85□□□□□ -0.35
UPK1B-202ENST00000460625 C12orf60Q5U649 245 aa12.85□□□□□ -0.35
UPK1B-202ENST00000460625 CERS3Q8IU89 383 aa12.85□□□□□ -0.35
UPK1B-202ENST00000460625 FBXL16Q8N461 479 aa12.85□□□□□ -0.35
UPK1B-202ENST00000460625 INTS4Q96HW7 963 aaKnown RBP12.85□□□□□ -0.35
UPK1B-202ENST00000460625 GMLQ99445 158 aa12.85□□□□□ -0.35
UPK1B-202ENST00000460625 SH2B1Q9NRF2 756 aaPredicted RBP12.85□□□□□ -0.35
UPK1B-202ENST00000460625 FGRP09769 529 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 RBM5P52756 815 aaKnown RBP eCLIP12.84□□□□□ -0.35
UPK1B-202ENST00000460625 DYNLL2Q96FJ2 89 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 ZKSCAN3Q9BRR0 538 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 SYT17Q9BSW7 474 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 MRIQ9BWK5 157 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 KRT23Q9C075 422 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 RNF41Q9H4P4 317 aaPredicted RBP12.84□□□□□ -0.35
UPK1B-202ENST00000460625 CNNM2Q9H8M5 875 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 BRPF3Q9ULD4 1205 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
UPK1B-202ENST00000460625 WDR19Q8NEZ3 1342 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 LTBP3Q9NS15 1303 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 SH2B2O14492 632 aaPredicted RBP12.84□□□□□ -0.35
UPK1B-202ENST00000460625 CACNB3P54284 484 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 HDLBPQ00341 1268 aaKnown RBP12.84□□□□□ -0.35
UPK1B-202ENST00000460625 NFIAQ12857 509 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 PKP1Q13835 747 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 IGDCC4Q8TDY8 1250 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 JDP2Q8WYK2 163 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 CHMP5Q9NZZ3 219 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 SERPINA10Q9UK55 444 aa12.84□□□□□ -0.35
UPK1B-202ENST00000460625 POLR3DP05423 398 aaPredicted RBP12.83□□□□□ -0.36
UPK1B-202ENST00000460625 SCRN1Q12765 414 aa12.83□□□□□ -0.36
UPK1B-202ENST00000460625 CFAP100Q494V2 611 aa12.83□□□□□ -0.36
UPK1B-202ENST00000460625 SLC44A5Q8NCS7 719 aa12.83□□□□□ -0.36
UPK1B-202ENST00000460625 PRMT6Q96LA8 375 aaPredicted RBP12.83□□□□□ -0.36
UPK1B-202ENST00000460625 MYO3BQ8WXR4 1341 aa12.82□□□□□ -0.36
UPK1B-202ENST00000460625 PDIA3P30101 505 aaKnown RBP12.82□□□□□ -0.36
UPK1B-202ENST00000460625 EVCP57679 992 aa12.82□□□□□ -0.36
UPK1B-202ENST00000460625 RAB11FIP4Q86YS3 637 aa12.82□□□□□ -0.36
UPK1B-202ENST00000460625 ZFPM1Q8IX07 1006 aa12.82□□□□□ -0.36
UPK1B-202ENST00000460625 GTF3C6Q969F1 213 aa12.82□□□□□ -0.36
UPK1B-202ENST00000460625 LY9Q9HBG7 655 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms