RNA–Protein interactions for RNA: ENST00000442217.5

CCDC115-203, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 1,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-203ENST00000442217 MCM9Q9NXL9 1143 aa22.27■■□□□ 1.15
CCDC115-203ENST00000442217 MKRN1Q9UHC7 482 aaKnown RBP22.27■■□□□ 1.15
CCDC115-203ENST00000442217 LARGE1O95461 756 aa22.26■■□□□ 1.15
CCDC115-203ENST00000442217 VIL1P09327 827 aaKnown RBP22.26■■□□□ 1.15
CCDC115-203ENST00000442217 EXOSC10Q01780 885 aaKnown RBP22.26■■□□□ 1.15
CCDC115-203ENST00000442217 APOBEC3HQ6NTF7 200 aaKnown RBP22.26■■□□□ 1.15
CCDC115-203ENST00000442217 Q6ZUG5 572 aa22.26■■□□□ 1.15
CCDC115-203ENST00000442217 ECM29Q5VYK3 1845 aa22.25■■□□□ 1.15
CCDC115-203ENST00000442217 B4E1Z4 1266 aa22.25■■□□□ 1.15
CCDC115-203ENST00000442217 HMGB1P09429 215 aaKnown RBP22.25■■□□□ 1.15
CCDC115-203ENST00000442217 RBM5P52756 815 aaKnown RBP eCLIP22.25■■□□□ 1.15
CCDC115-203ENST00000442217 AKNAD1Q5T1N1 836 aa22.25■■□□□ 1.15
CCDC115-203ENST00000442217 ARHGAP27Q6ZUM4 889 aa22.25■■□□□ 1.15
CCDC115-203ENST00000442217 RALYLQ86SE5 291 aaKnown RBP22.25■■□□□ 1.15
CCDC115-203ENST00000442217 SAP30BPQ9UHR5 308 aaKnown RBP22.25■■□□□ 1.15
CCDC115-203ENST00000442217 DDX60LQ5H9U9 1706 aaKnown RBP22.25■■□□□ 1.15
CCDC115-203ENST00000442217 PLCG2P16885 1265 aa22.24■■□□□ 1.15
CCDC115-203ENST00000442217 ANTXR2P58335 489 aa22.24■■□□□ 1.15
CCDC115-203ENST00000442217 USP40Q9NVE5 1235 aa22.24■■□□□ 1.15
CCDC115-203ENST00000442217 SRCAPQ6ZRS2 3230 aa22.24■■□□□ 1.15
CCDC115-203ENST00000442217 RRP12Q5JTH9 1297 aaKnown RBP22.24■■□□□ 1.15
CCDC115-203ENST00000442217 CDC42EP5Q6NZY7 148 aa22.24■■□□□ 1.15
CCDC115-203ENST00000442217 MFSD6Q6ZSS7 791 aa22.24■■□□□ 1.15
CCDC115-203ENST00000442217 CYB5R4Q7L1T6 521 aa22.24■■□□□ 1.15
CCDC115-203ENST00000442217 CERS3Q8IU89 383 aa22.24■■□□□ 1.15
CCDC115-203ENST00000442217 STAG1Q8WVM7 1258 aa22.24■■□□□ 1.15
CCDC115-203ENST00000442217 ZDHHC15Q96MV8 337 aa22.24■■□□□ 1.15
CCDC115-203ENST00000442217 GMLQ99445 158 aa22.24■■□□□ 1.15
CCDC115-203ENST00000442217 GPHNQ9NQX3 736 aaPredicted RBP22.24■■□□□ 1.15
CCDC115-203ENST00000442217 ANAPC4Q9UJX5 808 aa22.24■■□□□ 1.15
CCDC115-203ENST00000442217 TPCN1Q9ULQ1 816 aa22.24■■□□□ 1.15
CCDC115-203ENST00000442217 LIMCH1Q9UPQ0 1083 aa22.24■■□□□ 1.15
CCDC115-203ENST00000442217 MYH1P12882 1939 aa22.23■■□□□ 1.15
CCDC115-203ENST00000442217 FLT1P17948 1338 aa22.23■■□□□ 1.15
CCDC115-203ENST00000442217 HSP90AA1P07900 732 aaKnown RBP22.23■■□□□ 1.15
CCDC115-203ENST00000442217 TRDNQ13061 729 aa22.23■■□□□ 1.15
CCDC115-203ENST00000442217 TOMM22Q9NS69 142 aa22.23■■□□□ 1.15
CCDC115-203ENST00000442217 ARPP21Q9UBL0 812 aaPredicted RBP22.23■■□□□ 1.15
CCDC115-203ENST00000442217 MYO3BQ8WXR4 1341 aa22.23■■□□□ 1.15
CCDC115-203ENST00000442217 PRC1O43663 620 aa22.22■■□□□ 1.15
CCDC115-203ENST00000442217 PICALMQ13492 652 aa22.22■■□□□ 1.15
CCDC115-203ENST00000442217 CIAPIN1Q6FI81 312 aa22.22■■□□□ 1.15
CCDC115-203ENST00000442217 IL27Q8NEV9 243 aa22.22■■□□□ 1.15
CCDC115-203ENST00000442217 ALDH8A1Q9H2A2 487 aaPredicted RBP22.22■■□□□ 1.15
CCDC115-203ENST00000442217 SERPINA10Q9UK55 444 aa22.22■■□□□ 1.15
CCDC115-203ENST00000442217 UTRNP46939 3433 aa22.22■■□□□ 1.15
CCDC115-203ENST00000442217 MCM5P33992 734 aa22.22■■□□□ 1.15
CCDC115-203ENST00000442217 HDLBPQ00341 1268 aaKnown RBP22.22■■□□□ 1.15
CCDC115-203ENST00000442217 CFAP100Q494V2 611 aa22.22■■□□□ 1.15
CCDC115-203ENST00000442217 SBK1Q52WX2 424 aa22.22■■□□□ 1.15
CCDC115-203ENST00000442217 BRF1Q92994 677 aa22.22■■□□□ 1.15
CCDC115-203ENST00000442217 MRIQ9BWK5 157 aa22.22■■□□□ 1.15
CCDC115-203ENST00000442217 PRDM1O75626 825 aa22.21■■□□□ 1.15
CCDC115-203ENST00000442217 WDHD1O75717 1129 aaPredicted RBP22.21■■□□□ 1.15
CCDC115-203ENST00000442217 YBX3P16989 372 aaKnown RBP eCLIP22.21■■□□□ 1.152e-8■□□□□ 11.2
CCDC115-203ENST00000442217 CACNB3P54284 484 aa22.21■■□□□ 1.15
CCDC115-203ENST00000442217 FGD1P98174 961 aa22.21■■□□□ 1.15
CCDC115-203ENST00000442217 ME3Q16798 604 aa22.21■■□□□ 1.15
CCDC115-203ENST00000442217 DDX4Q9NQI0 724 aaKnown RBP22.21■■□□□ 1.15
CCDC115-203ENST00000442217 KDM4AO75164 1064 aa22.2■■□□□ 1.14
CCDC115-203ENST00000442217 C12orf60Q5U649 245 aa22.2■■□□□ 1.14
CCDC115-203ENST00000442217 PLCD1P51178 756 aa22.2■■□□□ 1.14
CCDC115-203ENST00000442217 NFIAQ12857 509 aa22.2■■□□□ 1.14
CCDC115-203ENST00000442217 ANKRD1Q15327 319 aa22.2■■□□□ 1.14
CCDC115-203ENST00000442217 DYNLL2Q96FJ2 89 aa22.2■■□□□ 1.14
CCDC115-203ENST00000442217 SBF1O95248 1867 aa22.19■■□□□ 1.14
CCDC115-203ENST00000442217 SHTN1A0MZ66 631 aa22.19■■□□□ 1.14
CCDC115-203ENST00000442217 DTNBO60941 627 aa22.19■■□□□ 1.14
CCDC115-203ENST00000442217 POLR3DP05423 398 aaPredicted RBP22.19■■□□□ 1.14
CCDC115-203ENST00000442217 APOBRQ0VD83 1088 aa22.19■■□□□ 1.14
CCDC115-203ENST00000442217 CUL4AQ13619 759 aa22.19■■□□□ 1.14
CCDC115-203ENST00000442217 NECAB1Q8N987 351 aa22.19■■□□□ 1.14
CCDC115-203ENST00000442217 PRMT6Q96LA8 375 aaPredicted RBP22.19■■□□□ 1.14
CCDC115-203ENST00000442217 KRT23Q9C075 422 aa22.19■■□□□ 1.14
CCDC115-203ENST00000442217 RNF41Q9H4P4 317 aaPredicted RBP22.19■■□□□ 1.14
CCDC115-203ENST00000442217 CNNM2Q9H8M5 875 aa22.19■■□□□ 1.14
CCDC115-203ENST00000442217 ZSWIM5Q9P217 1185 aa22.19■■□□□ 1.14
CCDC115-203ENST00000442217 ST3GAL1Q11201 340 aa22.18■■□□□ 1.14
CCDC115-203ENST00000442217 FZD9O00144 591 aa22.17■■□□□ 1.14
CCDC115-203ENST00000442217 STK3Q13188 491 aa22.17■■□□□ 1.14
CCDC115-203ENST00000442217 AGBL3Q8NEM8 1001 aa22.17■■□□□ 1.14
CCDC115-203ENST00000442217 ZKSCAN3Q9BRR0 538 aa22.17■■□□□ 1.14
CCDC115-203ENST00000442217 AGXT2Q9BYV1 514 aa22.17■■□□□ 1.14
CCDC115-203ENST00000442217 TDRD3Q9H7E2 651 aaKnown RBP22.17■■□□□ 1.14
CCDC115-203ENST00000442217 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.17■■□□□ 1.14
CCDC115-203ENST00000442217 DICER1Q9UPY3 1922 aaKnown RBP22.17■■□□□ 1.14
CCDC115-203ENST00000442217 ZNF541Q9H0D2 1346 aa22.17■■□□□ 1.14
CCDC115-203ENST00000442217 TNIP1Q15025 636 aa22.17■■□□□ 1.14
CCDC115-203ENST00000442217 CCDC83Q8IWF9 413 aa22.17■■□□□ 1.14
CCDC115-203ENST00000442217 ZSCAN31Q96LW9 406 aaPredicted RBP22.17■■□□□ 1.14
CCDC115-203ENST00000442217 HDAC9Q9UKV0 1011 aa22.17■■□□□ 1.14
CCDC115-203ENST00000442217 GJA3Q9Y6H8 435 aa22.17■■□□□ 1.14
CCDC115-203ENST00000442217 FGRP09769 529 aa22.16■■□□□ 1.14
CCDC115-203ENST00000442217 ZFPM1Q8IX07 1006 aa22.16■■□□□ 1.14
CCDC115-203ENST00000442217 AMOTL1Q8IY63 956 aa22.16■■□□□ 1.14
CCDC115-203ENST00000442217 SLC44A5Q8NCS7 719 aa22.16■■□□□ 1.14
CCDC115-203ENST00000442217 SENP2Q9HC62 589 aa22.16■■□□□ 1.14
CCDC115-203ENST00000442217 EIF6P56537 245 aaKnown RBP22.15■■□□□ 1.14
CCDC115-203ENST00000442217 OGFOD1Q8N543 542 aa22.15■■□□□ 1.14
CCDC115-203ENST00000442217 WDR19Q8NEZ3 1342 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms