RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 NACAP1Q9BZK3 213 aa12.65□□□□□ -0.38
HLA-DMB-259ENST00000438510 ATP8A2Q9NTI2 1148 aa12.65□□□□□ -0.38
HLA-DMB-259ENST00000438510 PGAP2Q9UHJ9 254 aa12.65□□□□□ -0.38
HLA-DMB-259ENST00000438510 PPP2R3BQ9Y5P8 575 aa12.65□□□□□ -0.38
HLA-DMB-259ENST00000438510 SLC4A4Q9Y6R1 1079 aa12.65□□□□□ -0.38
HLA-DMB-259ENST00000438510 SIPA1L1O43166 1804 aa12.65□□□□□ -0.39
HLA-DMB-259ENST00000438510 FLT1P17948 1338 aa12.64□□□□□ -0.39
HLA-DMB-259ENST00000438510 TCP10L2B9ZVM9 353 aa12.64□□□□□ -0.39
HLA-DMB-259ENST00000438510 CACNB3P54284 484 aa12.64□□□□□ -0.39
HLA-DMB-259ENST00000438510 GIMAP6Q6P9H5 292 aa12.64□□□□□ -0.39
HLA-DMB-259ENST00000438510 CCDC129Q6ZRS4 1044 aa12.64□□□□□ -0.39
HLA-DMB-259ENST00000438510 KIAA1211Q6ZU35 1233 aa12.64□□□□□ -0.39
HLA-DMB-259ENST00000438510 ZNF589Q86UQ0 364 aaPredicted RBP12.64□□□□□ -0.39
HLA-DMB-259ENST00000438510 AMOTL1Q8IY63 956 aa12.64□□□□□ -0.39
HLA-DMB-259ENST00000438510 TGFBRAP1Q8WUH2 860 aa12.64□□□□□ -0.39
HLA-DMB-259ENST00000438510 SDR42E1Q8WUS8 393 aa12.64□□□□□ -0.39
HLA-DMB-259ENST00000438510 ASTN2O75129 1339 aaPredicted RBP12.63□□□□□ -0.39
HLA-DMB-259ENST00000438510 ZMYM6O95789 1325 aa12.63□□□□□ -0.39
HLA-DMB-259ENST00000438510 PATL2C9JE40 543 aaKnown RBP12.63□□□□□ -0.39
HLA-DMB-259ENST00000438510 APPP05067 770 aa12.63□□□□□ -0.39
HLA-DMB-259ENST00000438510 NFIAQ12857 509 aa12.63□□□□□ -0.39
HLA-DMB-259ENST00000438510 MAPKAPK5Q8IW41 473 aa12.63□□□□□ -0.39
HLA-DMB-259ENST00000438510 FAM151AQ8WW52 585 aa12.63□□□□□ -0.39
HLA-DMB-259ENST00000438510 OSBPL5Q9H0X9 879 aaPredicted RBP12.63□□□□□ -0.39
HLA-DMB-259ENST00000438510 FAM198AQ9UFP1 575 aa12.63□□□□□ -0.39
HLA-DMB-259ENST00000438510 CNTNAP1P78357 1384 aa12.63□□□□□ -0.39
HLA-DMB-259ENST00000438510 ATRNL1Q5VV63 1379 aa12.63□□□□□ -0.39
HLA-DMB-259ENST00000438510 ATAD5Q96QE3 1844 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 KIF3CO14782 793 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 PRKAB2O43741 272 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 REC8O95072 547 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 POTEIP0CG38 1075 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 POTEJP0CG39 1038 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 HSPD1P10809 573 aaKnown RBP12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 TDO2P48775 406 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 TCP10Q12799 353 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 RASA3Q14644 834 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 CDC37L1Q7L3B6 337 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 KRT26Q7Z3Y9 468 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 HOOK2Q96ED9 719 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 DSCC1Q9BVC3 393 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 NAPBQ9H115 298 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 DEFB129Q9H1M3 183 aa12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 DHX36Q9H2U1 1008 aaKnown RBP12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 DCP1AQ9NPI6 582 aaPredicted RBP12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 DDX4Q9NQI0 724 aaKnown RBP12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 ARPP21Q9UBL0 812 aaPredicted RBP12.62□□□□□ -0.39
HLA-DMB-259ENST00000438510 GSG1L2A8MUP6 293 aa12.61□□□□□ -0.39
HLA-DMB-259ENST00000438510 HLA-DOAP06340 250 aa12.61□□□□□ -0.39
HLA-DMB-259ENST00000438510 ZSCAN29Q8IWY8 852 aaPredicted RBP12.61□□□□□ -0.39
HLA-DMB-259ENST00000438510 IFNL3Q8IZI9 196 aa12.61□□□□□ -0.39
HLA-DMB-259ENST00000438510 IL25Q9H293 177 aa12.61□□□□□ -0.39
HLA-DMB-259ENST00000438510 ANO2Q9NQ90 1003 aa12.61□□□□□ -0.39
HLA-DMB-259ENST00000438510 MCM9Q9NXL9 1143 aa12.61□□□□□ -0.39
HLA-DMB-259ENST00000438510 MKRN1Q9UHC7 482 aaKnown RBP12.61□□□□□ -0.39
HLA-DMB-259ENST00000438510 OTOFQ9HC10 1997 aa12.6□□□□□ -0.39
HLA-DMB-259ENST00000438510 ADM5C9JUS6 153 aa12.6□□□□□ -0.39
HLA-DMB-259ENST00000438510 TOMM70O94826 608 aa12.6□□□□□ -0.39
HLA-DMB-259ENST00000438510 POLR3DP05423 398 aaPredicted RBP12.6□□□□□ -0.39
HLA-DMB-259ENST00000438510 ALX1Q15699 326 aa12.6□□□□□ -0.39
HLA-DMB-259ENST00000438510 VPS53Q5VIR6 699 aa12.6□□□□□ -0.39
HLA-DMB-259ENST00000438510 MAP1SQ66K74 1059 aaPredicted RBP12.6□□□□□ -0.39
HLA-DMB-259ENST00000438510 TTC6Q86TZ1 520 aa12.6□□□□□ -0.39
HLA-DMB-259ENST00000438510 SMC1BQ8NDV3 1235 aa12.6□□□□□ -0.39
HLA-DMB-259ENST00000438510 RBM46Q8TBY0 533 aaKnown RBP12.6□□□□□ -0.39
HLA-DMB-259ENST00000438510 TMEM39BQ9GZU3 492 aa12.6□□□□□ -0.39
HLA-DMB-259ENST00000438510 EPB41L4AQ9HCS5 686 aaPredicted RBP12.6□□□□□ -0.39
HLA-DMB-259ENST00000438510 CTNNA3Q9UI47 895 aa12.6□□□□□ -0.39
HLA-DMB-259ENST00000438510 DOCK1Q14185 1865 aa12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 PAPPA2Q9BXP8 1791 aa12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 FOXP2O15409 715 aa12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 EPB41L2O43491 1005 aaKnown RBP12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 NF2P35240 595 aa12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 SUPT20HL1Q3ZLR7 823 aa12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 SBK1Q52WX2 424 aa12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 USP48Q86UV5 1035 aa12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 CSRNP1Q96S65 589 aa12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 TRIM34Q9BYJ4 488 aa12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 GLIS2Q9BZE0 524 aaPredicted RBP12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 PI4KBQ9UBF8 816 aa12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 SAP30BPQ9UHR5 308 aaKnown RBP12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 TAOK2Q9UL54 1235 aa12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 SCAF8Q9UPN6 1271 aaKnown RBP12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
HLA-DMB-259ENST00000438510 USP17L12C9JPN9 530 aa12.58□□□□□ -0.4
HLA-DMB-259ENST00000438510 USP17L21D6R901 530 aa12.58□□□□□ -0.4
HLA-DMB-259ENST00000438510 FGAP02671 866 aa12.58□□□□□ -0.4
HLA-DMB-259ENST00000438510 SLC3A2P08195 630 aaKnown RBP12.58□□□□□ -0.4
HLA-DMB-259ENST00000438510 C8orf34Q49A92 452 aa12.58□□□□□ -0.4
HLA-DMB-259ENST00000438510 DCAF15Q66K64 600 aa12.58□□□□□ -0.4
HLA-DMB-259ENST00000438510 ZFPM1Q8IX07 1006 aa12.58□□□□□ -0.4
HLA-DMB-259ENST00000438510 CDCA5Q96FF9 252 aa12.58□□□□□ -0.4
HLA-DMB-259ENST00000438510 TEPSINQ96N21 525 aa12.58□□□□□ -0.4
HLA-DMB-259ENST00000438510 LSG1Q9H089 658 aaKnown RBP12.58□□□□□ -0.4
HLA-DMB-259ENST00000438510 EHD4Q9H223 541 aa12.58□□□□□ -0.4
HLA-DMB-259ENST00000438510 PALD1Q9ULE6 856 aa12.58□□□□□ -0.4
HLA-DMB-259ENST00000438510 ROBO3Q96MS0 1386 aa12.57□□□□□ -0.4
HLA-DMB-259ENST00000438510 DDTLA6NHG4 134 aaPredicted RBP12.57□□□□□ -0.4
HLA-DMB-259ENST00000438510 MINDY4BA8MYZ0 360 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms