RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 COL9A3Q14050 684 aaPredicted RBP18.73■□□□□ 0.59
SCRN1-205ENST00000425819 MICALL2Q8IY33 904 aa18.73■□□□□ 0.59
SCRN1-205ENST00000425819 DPF2Q92785 391 aa18.73■□□□□ 0.59
SCRN1-205ENST00000425819 NEK1Q96PY6 1258 aa18.73■□□□□ 0.59
SCRN1-205ENST00000425819 TM6SF1Q9BZW5 370 aa18.73■□□□□ 0.59
SCRN1-205ENST00000425819 DDX4Q9NQI0 724 aaKnown RBP18.73■□□□□ 0.59
SCRN1-205ENST00000425819 ARPP21Q9UBL0 812 aaPredicted RBP18.73■□□□□ 0.59
SCRN1-205ENST00000425819 ZNF280AP59817 542 aaPredicted RBP18.72■□□□□ 0.59
SCRN1-205ENST00000425819 EVX2Q03828 476 aa18.72■□□□□ 0.59
SCRN1-205ENST00000425819 NFIAQ12857 509 aa18.72■□□□□ 0.59
SCRN1-205ENST00000425819 RBM26Q5T8P6 1007 aaKnown RBP18.72■□□□□ 0.59
SCRN1-205ENST00000425819 BLOC1S2Q6QNY1 142 aa18.72■□□□□ 0.59
SCRN1-205ENST00000425819 GPC2Q8N158 579 aa18.72■□□□□ 0.59
SCRN1-205ENST00000425819 ZSWIM6Q9HCJ5 1215 aa18.72■□□□□ 0.59
SCRN1-205ENST00000425819 MYOZ2Q9NPC6 264 aa18.72■□□□□ 0.59
SCRN1-205ENST00000425819 CNOT7Q9UIV1 285 aaKnown RBP18.72■□□□□ 0.59
SCRN1-205ENST00000425819 DICER1Q9UPY3 1922 aaKnown RBP18.72■□□□□ 0.59
SCRN1-205ENST00000425819 CD2BP2O95400 341 aaKnown RBP18.72■□□□□ 0.59
SCRN1-205ENST00000425819 SBK1Q52WX2 424 aa18.72■□□□□ 0.59
SCRN1-205ENST00000425819 INCENPQ9NQS7 918 aa18.72■□□□□ 0.59
SCRN1-205ENST00000425819 CYP46A1Q9Y6A2 500 aa18.72■□□□□ 0.59
SCRN1-205ENST00000425819 TACC3Q9Y6A5 838 aa18.72■□□□□ 0.59
SCRN1-205ENST00000425819 CLRN2A0PK11 232 aa18.71■□□□□ 0.59
SCRN1-205ENST00000425819 ST18O60284 1047 aa18.71■□□□□ 0.59
SCRN1-205ENST00000425819 DDNO94850 711 aaPredicted RBP18.71■□□□□ 0.59
SCRN1-205ENST00000425819 POLR3DP05423 398 aaPredicted RBP18.71■□□□□ 0.59
SCRN1-205ENST00000425819 AKNAD1Q5T1N1 836 aa18.71■□□□□ 0.59
SCRN1-205ENST00000425819 RUFY3Q7L099 469 aa18.71■□□□□ 0.59
SCRN1-205ENST00000425819 AMOTL1Q8IY63 956 aa18.71■□□□□ 0.59
SCRN1-205ENST00000425819 MTMR14Q8NCE2 650 aa18.71■□□□□ 0.59
SCRN1-205ENST00000425819 ANAPC4Q9UJX5 808 aa18.71■□□□□ 0.59
SCRN1-205ENST00000425819 TIAM2Q8IVF5 1701 aa18.7■□□□□ 0.58
SCRN1-205ENST00000425819 NEDD4P46934 1319 aa18.7■□□□□ 0.58
SCRN1-205ENST00000425819 BAZ2AQ9UIF9 1905 aaKnown RBP18.7■□□□□ 0.58
SCRN1-205ENST00000425819 SRCAPQ6ZRS2 3230 aa18.7■□□□□ 0.58
SCRN1-205ENST00000425819 MMP14P50281 582 aa18.7■□□□□ 0.58
SCRN1-205ENST00000425819 C12orf60Q5U649 245 aa18.7■□□□□ 0.58
SCRN1-205ENST00000425819 SAMD7Q7Z3H4 446 aa18.7■□□□□ 0.58
SCRN1-205ENST00000425819 ZBED3Q96IU2 234 aaPredicted RBP18.7■□□□□ 0.58
SCRN1-205ENST00000425819 TCEANC2Q96MN5 208 aa18.7■□□□□ 0.58
SCRN1-205ENST00000425819 PDRG1Q9NUG6 133 aa18.7■□□□□ 0.58
SCRN1-205ENST00000425819 ZNF70Q9UC06 446 aaPredicted RBP18.7■□□□□ 0.58
SCRN1-205ENST00000425819 EGFRP00533 1210 aa18.69■□□□□ 0.58
SCRN1-205ENST00000425819 RPS6KB1P23443 525 aa18.69■□□□□ 0.58
SCRN1-205ENST00000425819 TCP10Q12799 353 aa18.69■□□□□ 0.58
SCRN1-205ENST00000425819 TRDNQ13061 729 aa18.69■□□□□ 0.58
SCRN1-205ENST00000425819 MFSD6Q6ZSS7 791 aa18.69■□□□□ 0.58
SCRN1-205ENST00000425819 RALYLQ86SE5 291 aaKnown RBP18.69■□□□□ 0.58
SCRN1-205ENST00000425819 NCOA7Q8NI08 942 aa18.69■□□□□ 0.58
SCRN1-205ENST00000425819 STAG1Q8WVM7 1258 aa18.69■□□□□ 0.58
SCRN1-205ENST00000425819 IDI2Q9BXS1 227 aa18.69■□□□□ 0.58
SCRN1-205ENST00000425819 OSBPL5Q9H0X9 879 aaPredicted RBP18.69■□□□□ 0.58
SCRN1-205ENST00000425819 TOMM22Q9NS69 142 aa18.69■□□□□ 0.58
SCRN1-205ENST00000425819 TMOD2Q9NZR1 351 aa18.69■□□□□ 0.58
SCRN1-205ENST00000425819 FAM198AQ9UFP1 575 aa18.69■□□□□ 0.58
SCRN1-205ENST00000425819 NAV1Q8NEY1 1877 aa18.69■□□□□ 0.58
SCRN1-205ENST00000425819 LAMA4Q16363 1823 aa18.69■□□□□ 0.58
SCRN1-205ENST00000425819 H7C1D1 291 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 WNT10BO00744 389 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 HMGB1P09429 215 aaKnown RBP18.68■□□□□ 0.58
SCRN1-205ENST00000425819 PLCD1P51178 756 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 NBPF9Q3BBW0 867 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 TBC1D10BQ4KMP7 808 aaPredicted RBP18.68■□□□□ 0.58
SCRN1-205ENST00000425819 HSCBQ8IWL3 235 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 ZFPM1Q8IX07 1006 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 SNX21Q969T3 373 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 TBC1D2Q9BYX2 928 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 RNF41Q9H4P4 317 aaPredicted RBP18.68■□□□□ 0.58
SCRN1-205ENST00000425819 GPRC5DQ9NZD1 345 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 CDK5RAP2Q96SN8 1893 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 B4E1Z4 1266 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 TCP10L2B9ZVM9 353 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 MYO1BO43795 1136 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 SLC3A2P08195 630 aaKnown RBP18.68■□□□□ 0.58
SCRN1-205ENST00000425819 SPDYE2Q495Y8 402 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 RRP12Q5JTH9 1297 aaKnown RBP18.68■□□□□ 0.58
SCRN1-205ENST00000425819 NOL8Q76FK4 1167 aaKnown RBP18.68■□□□□ 0.58
SCRN1-205ENST00000425819 CHST3Q7LGC8 479 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 NKX2-3Q8TAU0 364 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 DYNLL2Q96FJ2 89 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 TTC14Q96N46 770 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 VEZTQ9HBM0 779 aa18.68■□□□□ 0.58
SCRN1-205ENST00000425819 EPS15P42566 896 aa18.67■□□□□ 0.58
SCRN1-205ENST00000425819 BECN1Q14457 450 aa18.67■□□□□ 0.58
SCRN1-205ENST00000425819 KIF4BQ2VIQ3 1234 aa18.67■□□□□ 0.58
SCRN1-205ENST00000425819 DHX32Q7L7V1 743 aaKnown RBP18.67■□□□□ 0.58
SCRN1-205ENST00000425819 MB21D2Q8IYB1 491 aaPredicted RBP18.67■□□□□ 0.58
SCRN1-205ENST00000425819 IPO9Q96P70 1041 aaKnown RBP18.67■□□□□ 0.58
SCRN1-205ENST00000425819 PRDM1O75626 825 aa18.66■□□□□ 0.58
SCRN1-205ENST00000425819 SLC4A3P48751 1232 aa18.66■□□□□ 0.58
SCRN1-205ENST00000425819 AK2P54819 239 aa18.66■□□□□ 0.58
SCRN1-205ENST00000425819 DPY19L2Q6NUT2 758 aa18.66■□□□□ 0.58
SCRN1-205ENST00000425819 LRRC2Q9BYS8 371 aa18.66■□□□□ 0.58
SCRN1-205ENST00000425819 KRT23Q9C075 422 aa18.66■□□□□ 0.58
SCRN1-205ENST00000425819 CNNM2Q9H8M5 875 aa18.66■□□□□ 0.58
SCRN1-205ENST00000425819 DDX60LQ5H9U9 1706 aaKnown RBP18.66■□□□□ 0.58
SCRN1-205ENST00000425819 FOCADQ5VW36 1801 aa18.65■□□□□ 0.58
SCRN1-205ENST00000425819 KDM4AO75164 1064 aa18.65■□□□□ 0.58
SCRN1-205ENST00000425819 ENTPD3O75355 529 aa18.65■□□□□ 0.58
SCRN1-205ENST00000425819 NPM3O75607 178 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms