RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ANGEL1Q9UNK9 670 aaKnown RBP6.13□□□□□ -1.43
HMGB3P20-201ENST00000417997 SAMM50Q9Y512 469 aa6.13□□□□□ -1.43
HMGB3P20-201ENST00000417997 BIVM-ERCC5R4GMW8 1640 aa6.13□□□□□ -1.43
HMGB3P20-201ENST00000417997 GIPC1O14908 333 aa6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 SYNJ1O43426 1573 aa6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 ADAMTS4O75173 837 aa6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 CDK5R2Q13319 367 aa6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 TTLL4Q14679 1199 aa6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 CPSF6Q16630 551 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 PDZD3Q86UT5 571 aa6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 SMYD4Q8IYR2 804 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 GATA6Q92908 595 aa6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 NECAB3Q96P71 396 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 SYNGAP1Q96PV0 1343 aa6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 GSX1Q9H4S2 264 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 PICK1Q9NRD5 415 aa6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 DISC1Q9NRI5 854 aa6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 OAS3Q9Y6K5 1087 aaKnown RBP6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 LAMC3Q9Y6N6 1575 aa6.12□□□□□ -1.43
HMGB3P20-201ENST00000417997 CFTRP13569 1480 aa6.11□□□□□ -1.43
HMGB3P20-201ENST00000417997 WRNQ14191 1432 aaPredicted RBP eCLIP6.11□□□□□ -1.43
HMGB3P20-201ENST00000417997 PAGE1O75459 146 aa6.11□□□□□ -1.43
HMGB3P20-201ENST00000417997 USP17L7P0C7H9 530 aa6.11□□□□□ -1.43
HMGB3P20-201ENST00000417997 IRAK1P51617 712 aa6.11□□□□□ -1.43
HMGB3P20-201ENST00000417997 GRIN3AQ8TCU5 1115 aa6.11□□□□□ -1.43
HMGB3P20-201ENST00000417997 GPBAR1Q8TDU6 330 aa6.11□□□□□ -1.43
HMGB3P20-201ENST00000417997 C12orf49Q9H741 205 aa6.11□□□□□ -1.43
HMGB3P20-201ENST00000417997 C1GALT1Q9NS00 363 aa6.11□□□□□ -1.43
HMGB3P20-201ENST00000417997 PPM1HQ9ULR3 514 aa6.11□□□□□ -1.43
HMGB3P20-201ENST00000417997 TTF2Q9UNY4 1162 aaKnown RBP6.11□□□□□ -1.43
HMGB3P20-201ENST00000417997 CSADQ9Y600 493 aa6.11□□□□□ -1.43
HMGB3P20-201ENST00000417997 ENC1O14682 589 aa6.1□□□□□ -1.43
HMGB3P20-201ENST00000417997 MPRIPQ6WCQ1 1025 aa6.1□□□□□ -1.43
HMGB3P20-201ENST00000417997 SND1Q7KZF4 910 aaKnown RBP eCLIP6.1□□□□□ -1.43
HMGB3P20-201ENST00000417997 PSMG3-AS1Q96PY0 264 aa6.1□□□□□ -1.43
HMGB3P20-201ENST00000417997 FAM8A1Q9UBU6 413 aa6.1□□□□□ -1.43
HMGB3P20-201ENST00000417997 PCDHGC5Q9Y5F6 944 aa6.1□□□□□ -1.43
HMGB3P20-201ENST00000417997 TOP2BQ02880 1626 aa6.1□□□□□ -1.43
HMGB3P20-201ENST00000417997 ANKRD33BA6NCL7 494 aa6.09□□□□□ -1.43
HMGB3P20-201ENST00000417997 CELA3AP09093 270 aa6.09□□□□□ -1.43
HMGB3P20-201ENST00000417997 FAM87AP0C7U9 286 aa6.09□□□□□ -1.43
HMGB3P20-201ENST00000417997 MSMPQ1L6U9 139 aa6.09□□□□□ -1.43
HMGB3P20-201ENST00000417997 CYP27C1Q4G0S4 372 aa6.09□□□□□ -1.43
HMGB3P20-201ENST00000417997 LLGL2Q6P1M3 1020 aa6.09□□□□□ -1.43
HMGB3P20-201ENST00000417997 OGFOD3Q6PK18 319 aa6.09□□□□□ -1.43
HMGB3P20-201ENST00000417997 SEZ6L2Q6UXD5 910 aa6.09□□□□□ -1.43
HMGB3P20-201ENST00000417997 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB3P20-201ENST00000417997 KIF21AQ7Z4S6 1674 aa6.08□□□□□ -1.44
HMGB3P20-201ENST00000417997 DCDC2CA8MYV0 355 aa6.08□□□□□ -1.44
HMGB3P20-201ENST00000417997 NEFMP07197 916 aa6.08□□□□□ -1.44
HMGB3P20-201ENST00000417997 BMP6P22004 513 aa6.08□□□□□ -1.44
HMGB3P20-201ENST00000417997 EIF4BP23588 611 aaKnown RBP6.08□□□□□ -1.44
HMGB3P20-201ENST00000417997 ZNF252P-AS1Q0IIN9 211 aa6.08□□□□□ -1.44
HMGB3P20-201ENST00000417997 LRRC14Q15048 493 aa6.08□□□□□ -1.44
HMGB3P20-201ENST00000417997 ZC3H12AQ5D1E8 599 aaKnown RBP6.08□□□□□ -1.44
HMGB3P20-201ENST00000417997 PPM1JQ5JR12 505 aa6.08□□□□□ -1.44
HMGB3P20-201ENST00000417997 ARHGAP27Q6ZUM4 889 aa6.08□□□□□ -1.44
HMGB3P20-201ENST00000417997 ISL2Q96A47 359 aa6.08□□□□□ -1.44
HMGB3P20-201ENST00000417997 BSDC1Q9NW68 430 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P20-201ENST00000417997 ZC3H7BQ9UGR2 993 aaKnown RBP6.08□□□□□ -1.44
HMGB3P20-201ENST00000417997 PCOLCE2Q9UKZ9 415 aa6.08□□□□□ -1.44
HMGB3P20-201ENST00000417997 PCDHA4Q9UN74 947 aa6.08□□□□□ -1.44
HMGB3P20-201ENST00000417997 CADPSQ9ULU8 1353 aa6.07□□□□□ -1.44
HMGB3P20-201ENST00000417997 PRPF40AO75400 957 aaKnown RBP6.07□□□□□ -1.44
HMGB3P20-201ENST00000417997 GNA15P30679 374 aa6.07□□□□□ -1.44
HMGB3P20-201ENST00000417997 ERVK-24P63145 666 aa6.07□□□□□ -1.44
HMGB3P20-201ENST00000417997 EAPPQ56P03 285 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P20-201ENST00000417997 PCNX4Q63HM2 1172 aa6.07□□□□□ -1.44
HMGB3P20-201ENST00000417997 MCTP1Q6DN14 999 aa6.07□□□□□ -1.44
HMGB3P20-201ENST00000417997 VSIG10LQ86VR7 867 aa6.07□□□□□ -1.44
HMGB3P20-201ENST00000417997 TP53INP2Q8IXH6 220 aa6.07□□□□□ -1.44
HMGB3P20-201ENST00000417997 FAM181AQ8N9Y4 354 aa6.07□□□□□ -1.44
HMGB3P20-201ENST00000417997 FLCNQ8NFG4 579 aa6.07□□□□□ -1.44
HMGB3P20-201ENST00000417997 FRMD6Q96NE9 622 aa6.07□□□□□ -1.44
HMGB3P20-201ENST00000417997 DUSP9Q99956 384 aaKnown RBP6.07□□□□□ -1.44
HMGB3P20-201ENST00000417997 CCDC39Q9UFE4 941 aa6.07□□□□□ -1.44
HMGB3P20-201ENST00000417997 TRIM37O94972 964 aa6.06□□□□□ -1.44
HMGB3P20-201ENST00000417997 RASIP1Q5U651 963 aa6.06□□□□□ -1.44
HMGB3P20-201ENST00000417997 C12orf40Q86WS4 652 aa6.06□□□□□ -1.44
HMGB3P20-201ENST00000417997 TOP6BLQ8N6T0 577 aa6.06□□□□□ -1.44
HMGB3P20-201ENST00000417997 RNF214Q8ND24 703 aa6.06□□□□□ -1.44
HMGB3P20-201ENST00000417997 ELMO3Q96BJ8 720 aa6.06□□□□□ -1.44
HMGB3P20-201ENST00000417997 FANCD2Q9BXW9 1451 aa6.06□□□□□ -1.44
HMGB3P20-201ENST00000417997 CEP164Q9UPV0 1460 aa6.06□□□□□ -1.44
HMGB3P20-201ENST00000417997 CUX1P39880 1505 aa6.05□□□□□ -1.44
HMGB3P20-201ENST00000417997 LEFTY1O75610 366 aa6.05□□□□□ -1.44
HMGB3P20-201ENST00000417997 LMNB1P20700 586 aa6.05□□□□□ -1.44
HMGB3P20-201ENST00000417997 FGD1P98174 961 aa6.05□□□□□ -1.44
HMGB3P20-201ENST00000417997 CCDC85BQ15834 202 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P20-201ENST00000417997 CDC37L1Q7L3B6 337 aa6.05□□□□□ -1.44
HMGB3P20-201ENST00000417997 ABI1Q8IZP0 508 aa6.05□□□□□ -1.44
HMGB3P20-201ENST00000417997 FBXL18Q96ME1 805 aa6.05□□□□□ -1.44
HMGB3P20-201ENST00000417997 RNF19AQ9NV58 838 aa6.05□□□□□ -1.44
HMGB3P20-201ENST00000417997 NESP48681 1621 aa6.05□□□□□ -1.44
HMGB3P20-201ENST00000417997 EEA1Q15075 1411 aa6.05□□□□□ -1.44
HMGB3P20-201ENST00000417997 DNMBPQ6XZF7 1577 aa6.05□□□□□ -1.44
HMGB3P20-201ENST00000417997 PRAMEF27A3QJZ7 478 aa6.04□□□□□ -1.44
HMGB3P20-201ENST00000417997 MAP3K11Q16584 847 aa6.04□□□□□ -1.44
HMGB3P20-201ENST00000417997 SV2BQ7L1I2 683 aa6.04□□□□□ -1.44
HMGB3P20-201ENST00000417997 CYP8B1Q9UNU6 501 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms