RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 MYH7P12883 1935 aa11.69□□□□□ -0.54
BBS4-202ENST00000395205 USP17L8P0C7I0 530 aa11.68□□□□□ -0.54
BBS4-202ENST00000395205 MCM5P33992 734 aa11.68□□□□□ -0.54
BBS4-202ENST00000395205 SLC4A8Q2Y0W8 1093 aa11.68□□□□□ -0.54
BBS4-202ENST00000395205 CIAPIN1Q6FI81 312 aa11.68□□□□□ -0.54
BBS4-202ENST00000395205 ZDHHC15Q96MV8 337 aa11.68□□□□□ -0.54
BBS4-202ENST00000395205 ALDH8A1Q9H2A2 487 aaPredicted RBP11.68□□□□□ -0.54
BBS4-202ENST00000395205 SLKQ9H2G2 1235 aaPredicted RBP11.68□□□□□ -0.54
BBS4-202ENST00000395205 RNF41Q9H4P4 317 aaPredicted RBP11.68□□□□□ -0.54
BBS4-202ENST00000395205 ARPP21Q9UBL0 812 aaPredicted RBP11.68□□□□□ -0.54
BBS4-202ENST00000395205 SERPINA10Q9UK55 444 aa11.68□□□□□ -0.54
BBS4-202ENST00000395205 HDAC9Q9UKV0 1011 aa11.68□□□□□ -0.54
BBS4-202ENST00000395205 POLR3DP05423 398 aaPredicted RBP11.68□□□□□ -0.54
BBS4-202ENST00000395205 SLC3A2P08195 630 aaKnown RBP11.68□□□□□ -0.54
BBS4-202ENST00000395205 EXOSC10Q01780 885 aaKnown RBP11.68□□□□□ -0.54
BBS4-202ENST00000395205 TNIP1Q15025 636 aa11.68□□□□□ -0.54
BBS4-202ENST00000395205 APOBEC3HQ6NTF7 200 aaKnown RBP11.68□□□□□ -0.54
BBS4-202ENST00000395205 OGFOD1Q8N543 542 aa11.68□□□□□ -0.54
BBS4-202ENST00000395205 STAG1Q8WVM7 1258 aa11.68□□□□□ -0.54
BBS4-202ENST00000395205 KRT23Q9C075 422 aa11.68□□□□□ -0.54
BBS4-202ENST00000395205 CNNM2Q9H8M5 875 aa11.68□□□□□ -0.54
BBS4-202ENST00000395205 SAP30BPQ9UHR5 308 aaKnown RBP11.68□□□□□ -0.54
BBS4-202ENST00000395205 ANAPC4Q9UJX5 808 aa11.68□□□□□ -0.54
BBS4-202ENST00000395205 MYH13Q9UKX3 1938 aa11.68□□□□□ -0.54
BBS4-202ENST00000395205 B4E1Z4 1266 aa11.67□□□□□ -0.54
BBS4-202ENST00000395205 PRC1O43663 620 aa11.67□□□□□ -0.54
BBS4-202ENST00000395205 CYP2D6P10635 497 aa11.67□□□□□ -0.54
BBS4-202ENST00000395205 EIF6P56537 245 aaKnown RBP11.67□□□□□ -0.54
BBS4-202ENST00000395205 PICALMQ13492 652 aa11.67□□□□□ -0.54
BBS4-202ENST00000395205 SBK1Q52WX2 424 aa11.67□□□□□ -0.54
BBS4-202ENST00000395205 CDC42EP5Q6NZY7 148 aa11.67□□□□□ -0.54
BBS4-202ENST00000395205 ZSCAN31Q96LW9 406 aaPredicted RBP11.67□□□□□ -0.54
BBS4-202ENST00000395205 SMIM22K7EJ46 135 aa11.67□□□□□ -0.54
BBS4-202ENST00000395205 TOB2Q14106 344 aaPredicted RBP11.67□□□□□ -0.54
BBS4-202ENST00000395205 CFAP100Q494V2 611 aa11.67□□□□□ -0.54
BBS4-202ENST00000395205 MB21D2Q8IYB1 491 aaPredicted RBP11.67□□□□□ -0.54
BBS4-202ENST00000395205 MKRN1Q9UHC7 482 aaKnown RBP11.67□□□□□ -0.54
BBS4-202ENST00000395205 PCDHAC2Q9Y5I4 1007 aa11.67□□□□□ -0.54
BBS4-202ENST00000395205 NEDD4P46934 1319 aa11.66□□□□□ -0.54
BBS4-202ENST00000395205 PRELPP51888 382 aa11.66□□□□□ -0.54
BBS4-202ENST00000395205 AGBL3Q8NEM8 1001 aa11.66□□□□□ -0.54
BBS4-202ENST00000395205 BRF1Q92994 677 aa11.66□□□□□ -0.54
BBS4-202ENST00000395205 TPCN1Q9ULQ1 816 aa11.66□□□□□ -0.54
BBS4-202ENST00000395205 TACC3Q9Y6A5 838 aa11.66□□□□□ -0.54
BBS4-202ENST00000395205 COL4A5P29400 1685 aa11.66□□□□□ -0.54
BBS4-202ENST00000395205 KDM4AO75164 1064 aa11.66□□□□□ -0.54
BBS4-202ENST00000395205 C12orf60Q5U649 245 aa11.66□□□□□ -0.54
BBS4-202ENST00000395205 GMLQ99445 158 aa11.66□□□□□ -0.54
BBS4-202ENST00000395205 ZSWIM5Q9P217 1185 aa11.66□□□□□ -0.54
BBS4-202ENST00000395205 FLT1P17948 1338 aa11.65□□□□□ -0.54
BBS4-202ENST00000395205 DLGAP5Q15398 846 aa11.65□□□□□ -0.54
BBS4-202ENST00000395205 CYB5R4Q7L1T6 521 aa11.65□□□□□ -0.54
BBS4-202ENST00000395205 RTN4Q9NQC3 1192 aaKnown RBP11.65□□□□□ -0.54
BBS4-202ENST00000395205 NAP1L2Q9ULW6 460 aaPredicted RBP11.65□□□□□ -0.54
BBS4-202ENST00000395205 GJA3Q9Y6H8 435 aa11.65□□□□□ -0.54
BBS4-202ENST00000395205 CHD4Q14839 1912 aa11.65□□□□□ -0.54
BBS4-202ENST00000395205 MAST2Q6P0Q8 1798 aa11.65□□□□□ -0.54
BBS4-202ENST00000395205 PRDM1O75626 825 aa11.65□□□□□ -0.54
BBS4-202ENST00000395205 WDHD1O75717 1129 aaPredicted RBP11.65□□□□□ -0.54
BBS4-202ENST00000395205 LMNB1P20700 586 aa11.65□□□□□ -0.54
BBS4-202ENST00000395205 PLCD1P51178 756 aa11.65□□□□□ -0.54
BBS4-202ENST00000395205 ANTXR2P58335 489 aa11.65□□□□□ -0.54
BBS4-202ENST00000395205 EVX2Q03828 476 aa11.65□□□□□ -0.54
BBS4-202ENST00000395205 PDE4BQ07343 736 aa11.65□□□□□ -0.54
BBS4-202ENST00000395205 ME3Q16798 604 aa11.65□□□□□ -0.54
BBS4-202ENST00000395205 ESR2Q92731 530 aa11.65□□□□□ -0.54
BBS4-202ENST00000395205 PRMT6Q96LA8 375 aaPredicted RBP11.65□□□□□ -0.54
BBS4-202ENST00000395205 TDRD3Q9H7E2 651 aaKnown RBP11.65□□□□□ -0.54
BBS4-202ENST00000395205 SH2B1Q9NRF2 756 aaPredicted RBP11.65□□□□□ -0.54
BBS4-202ENST00000395205 FZD9O00144 591 aa11.64□□□□□ -0.55
BBS4-202ENST00000395205 RANBP6O60518 1105 aaKnown RBP11.64□□□□□ -0.55
BBS4-202ENST00000395205 PCP11498 1178 aaKnown RBP11.64□□□□□ -0.55
BBS4-202ENST00000395205 APOBRQ0VD83 1088 aa11.64□□□□□ -0.55
BBS4-202ENST00000395205 STK3Q13188 491 aa11.64□□□□□ -0.55
BBS4-202ENST00000395205 CUL4AQ13619 759 aa11.64□□□□□ -0.55
BBS4-202ENST00000395205 NKX2-3Q8TAU0 364 aa11.64□□□□□ -0.55
BBS4-202ENST00000395205 IFIT3O14879 490 aaKnown RBP11.64□□□□□ -0.55
BBS4-202ENST00000395205 LARGE1O95461 756 aa11.64□□□□□ -0.55
BBS4-202ENST00000395205 CACNB3P54284 484 aa11.64□□□□□ -0.55
BBS4-202ENST00000395205 CCDC83Q8IWF9 413 aa11.64□□□□□ -0.55
BBS4-202ENST00000395205 NECAB1Q8N987 351 aa11.64□□□□□ -0.55
BBS4-202ENST00000395205 DYNLL2Q96FJ2 89 aa11.64□□□□□ -0.55
BBS4-202ENST00000395205 MKNK2Q9HBH9 465 aa11.64□□□□□ -0.55
BBS4-202ENST00000395205 DDX4Q9NQI0 724 aaKnown RBP11.64□□□□□ -0.55
BBS4-202ENST00000395205 GPHNQ9NQX3 736 aaPredicted RBP11.64□□□□□ -0.55
BBS4-202ENST00000395205 WDR19Q8NEZ3 1342 aa11.63□□□□□ -0.55
BBS4-202ENST00000395205 YBX3P16989 372 aaKnown RBP eCLIP11.63□□□□□ -0.55
BBS4-202ENST00000395205 TCP10Q12799 353 aa11.63□□□□□ -0.55
BBS4-202ENST00000395205 SART3Q15020 963 aaKnown RBP11.63□□□□□ -0.55
BBS4-202ENST00000395205 TMEM67Q5HYA8 995 aa11.63□□□□□ -0.55
BBS4-202ENST00000395205 TTC6Q86TZ1 520 aa11.63□□□□□ -0.55
BBS4-202ENST00000395205 TMEM87BQ96K49 555 aa11.63□□□□□ -0.55
BBS4-202ENST00000395205 CCDC88AQ3V6T2 1871 aa11.63□□□□□ -0.55
BBS4-202ENST00000395205 ERICH2A1L162 156 aa11.63□□□□□ -0.55
BBS4-202ENST00000395205 FGRP09769 529 aa11.63□□□□□ -0.55
BBS4-202ENST00000395205 RPS12P25398 132 aaKnown RBP11.63□□□□□ -0.55
BBS4-202ENST00000395205 NFIAQ12857 509 aa11.63□□□□□ -0.55
BBS4-202ENST00000395205 NFXL1Q6ZNB6 911 aa11.63□□□□□ -0.55
BBS4-202ENST00000395205 FBXL16Q8N461 479 aa11.63□□□□□ -0.55
BBS4-202ENST00000395205 UBE2Q2Q8WVN8 375 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms