RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 KIF23Q02241 960 aaPredicted RBP14.66□□□□□ -0.06
VPS16-202ENST00000380445 RRP12Q5JTH9 1297 aaKnown RBP14.66□□□□□ -0.06
VPS16-202ENST00000380445 TRAPPC3LQ5T215 181 aa14.66□□□□□ -0.06
VPS16-202ENST00000380445 OTUD7BQ6GQQ9 843 aa14.66□□□□□ -0.06
VPS16-202ENST00000380445 LINC00301Q8NCQ3 95 aa14.66□□□□□ -0.06
VPS16-202ENST00000380445 FTOQ9C0B1 505 aaKnown RBP eCLIP14.66□□□□□ -0.06
VPS16-202ENST00000380445 COL4A1P02462 1669 aa14.66□□□□□ -0.06
VPS16-202ENST00000380445 NID2Q14112 1375 aa14.66□□□□□ -0.06
VPS16-202ENST00000380445 ZBTB22O15209 634 aa14.66□□□□□ -0.06
VPS16-202ENST00000380445 PCP11498 1178 aaKnown RBP14.66□□□□□ -0.06
VPS16-202ENST00000380445 CDC27P30260 824 aa14.66□□□□□ -0.06
VPS16-202ENST00000380445 HIBADHP31937 336 aaKnown RBP14.66□□□□□ -0.06
VPS16-202ENST00000380445 SSRP1Q08945 709 aaKnown RBP14.66□□□□□ -0.06
VPS16-202ENST00000380445 MEX3CQ5U5Q3 659 aaKnown RBP14.66□□□□□ -0.06
VPS16-202ENST00000380445 MRPS27Q92552 414 aaKnown RBP14.66□□□□□ -0.06
VPS16-202ENST00000380445 ESR2Q92731 530 aa14.66□□□□□ -0.06
VPS16-202ENST00000380445 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.66□□□□□ -0.06
VPS16-202ENST00000380445 IGSF3O75054 1194 aa14.65□□□□□ -0.06
VPS16-202ENST00000380445 PPP2R5BQ15173 497 aa14.65□□□□□ -0.06
VPS16-202ENST00000380445 NTRK3Q16288 839 aa14.65□□□□□ -0.06
VPS16-202ENST00000380445 ANO6Q4KMQ2 910 aa14.65□□□□□ -0.06
VPS16-202ENST00000380445 FSIP1Q8NA03 581 aa14.65□□□□□ -0.06
VPS16-202ENST00000380445 RIOK1Q9BRS2 568 aaKnown RBP14.65□□□□□ -0.06
VPS16-202ENST00000380445 BRIP1Q9BX63 1249 aa14.65□□□□□ -0.06
VPS16-202ENST00000380445 INCENPQ9NQS7 918 aa14.65□□□□□ -0.06
VPS16-202ENST00000380445 PLCB2Q00722 1185 aa14.65□□□□□ -0.06
VPS16-202ENST00000380445 GNL2Q13823 731 aaKnown RBP14.65□□□□□ -0.06
VPS16-202ENST00000380445 NKX2-3Q8TAU0 364 aa14.65□□□□□ -0.06
VPS16-202ENST00000380445 UBAC1Q9BSL1 405 aa14.65□□□□□ -0.06
VPS16-202ENST00000380445 PCDHA7Q9UN72 937 aa14.65□□□□□ -0.06
VPS16-202ENST00000380445 LY75O60449 1722 aa14.64□□□□□ -0.07
VPS16-202ENST00000380445 SPTLC2O15270 562 aa14.64□□□□□ -0.07
VPS16-202ENST00000380445 IFNAR1P17181 557 aa14.64□□□□□ -0.07
VPS16-202ENST00000380445 RXRAP19793 462 aa14.64□□□□□ -0.07
VPS16-202ENST00000380445 SMIM5Q71RC9 77 aa14.64□□□□□ -0.07
VPS16-202ENST00000380445 ADGRA1Q86SQ6 560 aa14.64□□□□□ -0.07
VPS16-202ENST00000380445 TRIM22Q8IYM9 498 aa14.64□□□□□ -0.07
VPS16-202ENST00000380445 SENP2Q9HC62 589 aa14.64□□□□□ -0.07
VPS16-202ENST00000380445 TAF1P21675 1872 aa14.64□□□□□ -0.07
VPS16-202ENST00000380445 MINDY4BA8MYZ0 360 aa14.64□□□□□ -0.07
VPS16-202ENST00000380445 SNW1Q13573 536 aaKnown RBP14.64□□□□□ -0.07
VPS16-202ENST00000380445 ANO1Q5XXA6 986 aa14.64□□□□□ -0.07
VPS16-202ENST00000380445 KRT40Q6A162 431 aa14.64□□□□□ -0.07
VPS16-202ENST00000380445 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.64□□□□□ -0.07
VPS16-202ENST00000380445 ENGASEQ8NFI3 743 aa14.64□□□□□ -0.07
VPS16-202ENST00000380445 SDR42E1Q8WUS8 393 aa14.64□□□□□ -0.07
VPS16-202ENST00000380445 COL1A1P02452 1464 aaPredicted RBP14.64□□□□□ -0.07
VPS16-202ENST00000380445 FMNL1O95466 1100 aaPredicted RBP14.63□□□□□ -0.07
VPS16-202ENST00000380445 TPM3P06753 285 aa14.63□□□□□ -0.07
VPS16-202ENST00000380445 ADRA2BP18089 450 aa14.63□□□□□ -0.07
VPS16-202ENST00000380445 CCDC144CPQ8IYA2 1237 aa14.63□□□□□ -0.07
VPS16-202ENST00000380445 PHKBQ93100 1093 aa14.63□□□□□ -0.07
VPS16-202ENST00000380445 FAM217BQ9NTX9 383 aaPredicted RBP14.63□□□□□ -0.07
VPS16-202ENST00000380445 CLIC4Q9Y696 253 aa14.63□□□□□ -0.07
VPS16-202ENST00000380445 GOLGA6L6A8MZA4 724 aa14.63□□□□□ -0.07
VPS16-202ENST00000380445 ONECUT3O60422 494 aaPredicted RBP14.63□□□□□ -0.07
VPS16-202ENST00000380445 OFD1O75665 1012 aa14.63□□□□□ -0.07
VPS16-202ENST00000380445 RTN1Q16799 776 aa14.63□□□□□ -0.07
VPS16-202ENST00000380445 JMYQ8N9B5 988 aa14.63□□□□□ -0.07
VPS16-202ENST00000380445 MAP7D2Q96T17 732 aa14.63□□□□□ -0.07
VPS16-202ENST00000380445 GOLPH3LQ9H4A5 285 aa14.63□□□□□ -0.07
VPS16-202ENST00000380445 TACC3Q9Y6A5 838 aa14.63□□□□□ -0.07
VPS16-202ENST00000380445 TAF1LQ8IZX4 1826 aa14.63□□□□□ -0.07
VPS16-202ENST00000380445 CACNA1SQ13698 1873 aa14.63□□□□□ -0.07
VPS16-202ENST00000380445 ZNF165P49910 485 aa14.62□□□□□ -0.07
VPS16-202ENST00000380445 FAM182BQ5T319 152 aa14.62□□□□□ -0.07
VPS16-202ENST00000380445 SPTY2D1Q68D10 685 aaPredicted RBP14.62□□□□□ -0.07
VPS16-202ENST00000380445 BBXQ8WY36 941 aaPredicted RBP14.62□□□□□ -0.07
VPS16-202ENST00000380445 SLC26A6Q9BXS9 759 aa14.62□□□□□ -0.07
VPS16-202ENST00000380445 WTIPA6NIX2 430 aaPredicted RBP14.62□□□□□ -0.07
VPS16-202ENST00000380445 TM4SF1P30408 202 aa14.62□□□□□ -0.07
VPS16-202ENST00000380445 SAFBQ15424 915 aaKnown RBP eCLIP14.62□□□□□ -0.07
VPS16-202ENST00000380445 STX1AQ16623 288 aa14.62□□□□□ -0.07
VPS16-202ENST00000380445 NSUN4Q96CB9 384 aaKnown RBP14.62□□□□□ -0.07
VPS16-202ENST00000380445 MYL10Q9BUA6 226 aa14.62□□□□□ -0.07
VPS16-202ENST00000380445 CBX8Q9HC52 389 aa14.62□□□□□ -0.07
VPS16-202ENST00000380445 KIF28PB7ZC32 967 aa14.62□□□□□ -0.07
VPS16-202ENST00000380445 U2AF2P26368 475 aaKnown RBP eCLIP14.62□□□□□ -0.07
VPS16-202ENST00000380445 KIAA2012Q0VF49 1180 aa14.62□□□□□ -0.07
VPS16-202ENST00000380445 GJB4Q9NTQ9 266 aa14.62□□□□□ -0.07
VPS16-202ENST00000380445 RANBP6O60518 1105 aaKnown RBP14.61□□□□□ -0.07
VPS16-202ENST00000380445 SLC39A14Q15043 492 aa14.61□□□□□ -0.07
VPS16-202ENST00000380445 LUZP1Q86V48 1076 aa14.61□□□□□ -0.07
VPS16-202ENST00000380445 FMR1NBQ8N0W7 255 aaPredicted RBP14.61□□□□□ -0.07
VPS16-202ENST00000380445 AIFM3Q96NN9 605 aa14.61□□□□□ -0.07
VPS16-202ENST00000380445 ZKSCAN3Q9BRR0 538 aa14.61□□□□□ -0.07
VPS16-202ENST00000380445 CRNKL1Q9BZJ0 848 aaKnown RBP14.61□□□□□ -0.07
VPS16-202ENST00000380445 TRPC5Q9UL62 973 aaPredicted RBP14.61□□□□□ -0.07
VPS16-202ENST00000380445 LEMD3Q9Y2U8 911 aa14.61□□□□□ -0.07
VPS16-202ENST00000380445 DEXIO95424 95 aa14.61□□□□□ -0.07
VPS16-202ENST00000380445 MECOMQ03112 1051 aa14.61□□□□□ -0.07
VPS16-202ENST00000380445 FAM196AQ6ZSG2 479 aa14.61□□□□□ -0.07
VPS16-202ENST00000380445 IQCA1Q86XH1 822 aa14.61□□□□□ -0.07
VPS16-202ENST00000380445 ZNF654Q8IZM8 581 aa14.61□□□□□ -0.07
VPS16-202ENST00000380445 FANCBQ8NB91 859 aa14.61□□□□□ -0.07
VPS16-202ENST00000380445 TDRD7Q8NHU6 1098 aaKnown RBP14.61□□□□□ -0.07
VPS16-202ENST00000380445 SDF4Q9BRK5 362 aa14.61□□□□□ -0.07
VPS16-202ENST00000380445 ATP8A2Q9NTI2 1148 aa14.61□□□□□ -0.07
VPS16-202ENST00000380445 ANO10Q9NW15 660 aa14.61□□□□□ -0.07
VPS16-202ENST00000380445 PPP6R2O75170 966 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms