RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 LETM1O95202 739 aaPredicted RBP22.88■■□□□ 1.25
HDAC1-201ENST00000373548 SPTY2D1Q68D10 685 aaPredicted RBP22.88■■□□□ 1.25
HDAC1-201ENST00000373548 ZNF804AQ7Z570 1209 aa22.88■■□□□ 1.25
HDAC1-201ENST00000373548 CCDC144CPQ8IYA2 1237 aa22.88■■□□□ 1.25
HDAC1-201ENST00000373548 PGBD1Q96JS3 809 aa22.88■■□□□ 1.25
HDAC1-201ENST00000373548 SLC12A7Q9Y666 1083 aa22.88■■□□□ 1.25
HDAC1-201ENST00000373548 CCDC69A6NI79 296 aa22.88■■□□□ 1.25
HDAC1-201ENST00000373548 LIG1P18858 919 aa22.88■■□□□ 1.25
HDAC1-201ENST00000373548 NTRK3Q16288 839 aa22.88■■□□□ 1.25
HDAC1-201ENST00000373548 WDR66Q8TBY9 1149 aa22.88■■□□□ 1.25
HDAC1-201ENST00000373548 AKT1S1Q96B36 256 aa22.88■■□□□ 1.25
HDAC1-201ENST00000373548 LAMB1P07942 1786 aa22.88■■□□□ 1.25
HDAC1-201ENST00000373548 NID2Q14112 1375 aa22.87■■□□□ 1.25
HDAC1-201ENST00000373548 BBOX1O75936 387 aa22.87■■□□□ 1.25
HDAC1-201ENST00000373548 CDKL5O76039 1030 aa22.87■■□□□ 1.25
HDAC1-201ENST00000373548 SART3Q15020 963 aaKnown RBP22.87■■□□□ 1.25
HDAC1-201ENST00000373548 CTR9Q6PD62 1173 aa22.87■■□□□ 1.25
HDAC1-201ENST00000373548 UFL1O94874 794 aa22.87■■□□□ 1.25
HDAC1-201ENST00000373548 APBA3O96018 575 aa22.87■■□□□ 1.25
HDAC1-201ENST00000373548 KCNA4P22459 653 aa22.87■■□□□ 1.25
HDAC1-201ENST00000373548 WTAPQ15007 396 aa22.87■■□□□ 1.25
HDAC1-201ENST00000373548 CPLX2Q6PUV4 134 aaKnown RBP22.87■■□□□ 1.25
HDAC1-201ENST00000373548 DZIP1Q86YF9 867 aaKnown RBP22.87■■□□□ 1.25
HDAC1-201ENST00000373548 CRAMP1Q96RY5 1269 aa22.87■■□□□ 1.25
HDAC1-201ENST00000373548 CRNKL1Q9BZJ0 848 aaKnown RBP22.87■■□□□ 1.25
HDAC1-201ENST00000373548 FTOQ9C0B1 505 aaKnown RBP eCLIP22.87■■□□□ 1.25
HDAC1-201ENST00000373548 GJB4Q9NTQ9 266 aa22.87■■□□□ 1.25
HDAC1-201ENST00000373548 LRRC37AA6NMS7 1700 aa22.86■■□□□ 1.25
HDAC1-201ENST00000373548 GOLGA6L4A6NEF3 574 aa22.86■■□□□ 1.25
HDAC1-201ENST00000373548 ATP2B4P23634 1241 aa22.86■■□□□ 1.25
HDAC1-201ENST00000373548 ATL3Q6DD88 541 aa22.86■■□□□ 1.25
HDAC1-201ENST00000373548 COL23A1Q86Y22 540 aaPredicted RBP22.86■■□□□ 1.25
HDAC1-201ENST00000373548 ESR2Q92731 530 aa22.86■■□□□ 1.25
HDAC1-201ENST00000373548 USP28Q96RU2 1077 aa22.86■■□□□ 1.25
HDAC1-201ENST00000373548 RCOR1Q9UKL0 485 aa22.86■■□□□ 1.25
HDAC1-201ENST00000373548 NRXN2Q9P2S2 1712 aa22.86■■□□□ 1.25
HDAC1-201ENST00000373548 USP17L12C9JPN9 530 aa22.85■■□□□ 1.25
HDAC1-201ENST00000373548 USP17L21D6R901 530 aa22.85■■□□□ 1.25
HDAC1-201ENST00000373548 CEBPZQ03701 1054 aaKnown RBP22.85■■□□□ 1.25
HDAC1-201ENST00000373548 ZNF396Q96N95 335 aaPredicted RBP22.85■■□□□ 1.25
HDAC1-201ENST00000373548 DCP1AQ9NPI6 582 aaPredicted RBP22.85■■□□□ 1.25
HDAC1-201ENST00000373548 GGA1Q9UJY5 639 aa22.85■■□□□ 1.25
HDAC1-201ENST00000373548 ERICH2A1L162 156 aa22.85■■□□□ 1.25
HDAC1-201ENST00000373548 RANBP6O60518 1105 aaKnown RBP22.85■■□□□ 1.25
HDAC1-201ENST00000373548 LDHBP07195 334 aaKnown RBP22.85■■□□□ 1.25
HDAC1-201ENST00000373548 FGRP09769 529 aa22.85■■□□□ 1.25
HDAC1-201ENST00000373548 LTBP1Q14766 1721 aa22.85■■□□□ 1.25
HDAC1-201ENST00000373548 PHKBQ93100 1093 aa22.85■■□□□ 1.25
HDAC1-201ENST00000373548 AIFM3Q96NN9 605 aa22.85■■□□□ 1.25
HDAC1-201ENST00000373548 IGSF3O75054 1194 aa22.84■■□□□ 1.25
HDAC1-201ENST00000373548 SYNE3Q6ZMZ3 975 aa22.84■■□□□ 1.25
HDAC1-201ENST00000373548 RGS22Q8NE09 1264 aa22.84■■□□□ 1.25
HDAC1-201ENST00000373548 ATP8A2Q9NTI2 1148 aa22.84■■□□□ 1.25
HDAC1-201ENST00000373548 PODXL2Q9NZ53 605 aa22.84■■□□□ 1.25
HDAC1-201ENST00000373548 SEC23AQ15436 765 aa22.84■■□□□ 1.25
HDAC1-201ENST00000373548 GRIK5Q16478 980 aa22.84■■□□□ 1.25
HDAC1-201ENST00000373548 TMTC2Q8N394 836 aa22.84■■□□□ 1.25
HDAC1-201ENST00000373548 RNF214Q8ND24 703 aa22.84■■□□□ 1.25
HDAC1-201ENST00000373548 UBAC1Q9BSL1 405 aa22.84■■□□□ 1.25
HDAC1-201ENST00000373548 ALG1Q9BT22 464 aa22.84■■□□□ 1.25
HDAC1-201ENST00000373548 EVX2Q03828 476 aa22.83■■□□□ 1.25
HDAC1-201ENST00000373548 CCDC173Q0VFZ6 552 aa22.83■■□□□ 1.25
HDAC1-201ENST00000373548 NLGN1Q8N2Q7 840 aa22.83■■□□□ 1.25
HDAC1-201ENST00000373548 PPP1R9BQ96SB3 815 aa22.83■■□□□ 1.25
HDAC1-201ENST00000373548 CD209Q9NNX6 404 aa22.83■■□□□ 1.25
HDAC1-201ENST00000373548 PCP11498 1178 aaKnown RBP22.82■■□□□ 1.24
HDAC1-201ENST00000373548 IARSP41252 1262 aaKnown RBP22.82■■□□□ 1.24
HDAC1-201ENST00000373548 KLHL34Q8N239 644 aa22.82■■□□□ 1.24
HDAC1-201ENST00000373548 ANP32BQ92688 251 aaKnown RBP22.82■■□□□ 1.24
HDAC1-201ENST00000373548 TNKSO95271 1327 aa22.82■■□□□ 1.24
HDAC1-201ENST00000373548 FUCA2Q9BTY2 467 aa22.82■■□□□ 1.24
HDAC1-201ENST00000373548 DACT1Q9NYF0 836 aa22.82■■□□□ 1.24
HDAC1-201ENST00000373548 POLLQ9UGP5 575 aa22.82■■□□□ 1.24
HDAC1-201ENST00000373548 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.82■■□□□ 1.24
HDAC1-201ENST00000373548 STK36Q9NRP7 1315 aa22.82■■□□□ 1.24
HDAC1-201ENST00000373548 DLEC1Q9Y238 1755 aa22.82■■□□□ 1.24
HDAC1-201ENST00000373548 KIF28PB7ZC32 967 aa22.81■■□□□ 1.24
HDAC1-201ENST00000373548 PRDM1O75626 825 aa22.81■■□□□ 1.24
HDAC1-201ENST00000373548 IL1R1P14778 569 aa22.81■■□□□ 1.24
HDAC1-201ENST00000373548 KIF23Q02241 960 aaPredicted RBP22.81■■□□□ 1.24
HDAC1-201ENST00000373548 ZNF654Q8IZM8 581 aa22.81■■□□□ 1.24
HDAC1-201ENST00000373548 TBC1D16Q8TBP0 767 aa22.81■■□□□ 1.24
HDAC1-201ENST00000373548 BICD2Q8TD16 824 aa22.81■■□□□ 1.24
HDAC1-201ENST00000373548 IFNAR1P17181 557 aa22.81■■□□□ 1.24
HDAC1-201ENST00000373548 RCAN1P53805 252 aa22.81■■□□□ 1.24
HDAC1-201ENST00000373548 RTN1Q16799 776 aa22.81■■□□□ 1.24
HDAC1-201ENST00000373548 BRAPQ7Z569 592 aa22.81■■□□□ 1.24
HDAC1-201ENST00000373548 NUP62CLQ9H1M0 184 aa22.81■■□□□ 1.24
HDAC1-201ENST00000373548 POLR3DP05423 398 aaPredicted RBP22.8■■□□□ 1.24
HDAC1-201ENST00000373548 DIXDC1Q155Q3 683 aa22.8■■□□□ 1.24
HDAC1-201ENST00000373548 SBK1Q52WX2 424 aa22.8■■□□□ 1.24
HDAC1-201ENST00000373548 ZSCAN10Q96SZ4 725 aaPredicted RBP22.8■■□□□ 1.24
HDAC1-201ENST00000373548 ARPP21Q9UBL0 812 aaPredicted RBP22.8■■□□□ 1.24
HDAC1-201ENST00000373548 TNS1Q9HBL0 1735 aaKnown RBP22.8■■□□□ 1.24
HDAC1-201ENST00000373548 FMNL1O95466 1100 aaPredicted RBP22.79■■□□□ 1.24
HDAC1-201ENST00000373548 CYP2D6P10635 497 aa22.79■■□□□ 1.24
HDAC1-201ENST00000373548 KRT40Q6A162 431 aa22.79■■□□□ 1.24
HDAC1-201ENST00000373548 ENAHQ8N8S7 591 aaPredicted RBP22.79■■□□□ 1.24
HDAC1-201ENST00000373548 SLC26A6Q9BXS9 759 aa22.79■■□□□ 1.24
HDAC1-201ENST00000373548 RTEL1Q9NZ71 1219 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms