RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 LRP5O75197 1615 aa12.51□□□□□ -0.41
LCN2-202ENST00000372998 COL22A1Q8NFW1 1626 aaPredicted RBP12.51□□□□□ -0.41
LCN2-202ENST00000372998 ABCA3Q99758 1704 aa12.51□□□□□ -0.41
LCN2-202ENST00000372998 STX10O60499 249 aa12.5□□□□□ -0.41
LCN2-202ENST00000372998 DTNBO60941 627 aa12.5□□□□□ -0.41
LCN2-202ENST00000372998 DEXIO95424 95 aa12.5□□□□□ -0.41
LCN2-202ENST00000372998 ITGA6P23229 1130 aa12.5□□□□□ -0.41
LCN2-202ENST00000372998 ERCC5P28715 1186 aaPredicted RBP12.5□□□□□ -0.41
LCN2-202ENST00000372998 ADORA1P30542 326 aa12.5□□□□□ -0.41
LCN2-202ENST00000372998 PTPAQ15257 358 aa12.5□□□□□ -0.41
LCN2-202ENST00000372998 CFAP100Q494V2 611 aa12.5□□□□□ -0.41
LCN2-202ENST00000372998 CCDC93Q567U6 631 aa12.5□□□□□ -0.41
LCN2-202ENST00000372998 E4F1Q66K89 784 aaPredicted RBP12.5□□□□□ -0.41
LCN2-202ENST00000372998 NUTM2AQ8IVF1 878 aaPredicted RBP12.5□□□□□ -0.41
LCN2-202ENST00000372998 ENOX1Q8TC92 643 aaKnown RBP12.5□□□□□ -0.41
LCN2-202ENST00000372998 CTAGE1Q96RT6 745 aa12.5□□□□□ -0.41
LCN2-202ENST00000372998 NAPBQ9H115 298 aa12.5□□□□□ -0.41
LCN2-202ENST00000372998 TMX1Q9H3N1 280 aa12.5□□□□□ -0.41
LCN2-202ENST00000372998 KCNH3Q9ULD8 1083 aa12.5□□□□□ -0.41
LCN2-202ENST00000372998 PNPLA7Q6ZV29 1317 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 EFCAB8A8MWE9 144 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 IFIT3O14879 490 aaKnown RBP12.49□□□□□ -0.41
LCN2-202ENST00000372998 SEMA3EO15041 775 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 FOXP2O15409 715 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 IGSF3O75054 1194 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 TUBBP07437 444 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 PDE6AP16499 860 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 GTF2E1P29083 439 aaPredicted RBP12.49□□□□□ -0.41
LCN2-202ENST00000372998 EVA1CP58658 441 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 SEMA3FQ13275 785 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 TEX35Q5T0J7 233 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 NT5DC1Q5TFE4 455 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 ARMCX5Q6P1M9 558 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 NLRP10Q86W26 655 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 NOSTRINQ8IVI9 506 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 TTLL11Q8NHH1 800 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 IGDCC4Q8TDY8 1250 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 STAG1Q8WVM7 1258 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 UBXN4Q92575 508 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 SMARCE1Q969G3 411 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 STRBPQ96SI9 672 aaKnown RBP12.49□□□□□ -0.41
LCN2-202ENST00000372998 MAP3K14Q99558 947 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 TRMT1Q9NXH9 659 aaKnown RBP12.49□□□□□ -0.41
LCN2-202ENST00000372998 FAM53CQ9NYF3 392 aa12.49□□□□□ -0.41
LCN2-202ENST00000372998 NUP98P52948 1817 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 STRCP1A6NGW2 1772 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 NEDD4P46934 1319 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 ZNF532Q9HCE3 1301 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 POTEB2H3BUK9 544 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 IDH1O75874 414 aaKnown RBP12.48□□□□□ -0.41
LCN2-202ENST00000372998 MMP1P03956 469 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 CHGBP05060 677 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 CALM1P0DP23 149 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 CALM2P0DP24 149 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 CALM3P0DP25 149 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 PTPREP23469 700 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 MCAMP43121 646 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 AKAP17AQ02040 695 aaKnown RBP12.48□□□□□ -0.41
LCN2-202ENST00000372998 FILIP1LQ4L180 1135 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 AKNAD1Q5T1N1 836 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 MFSD6Q6ZSS7 791 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 ZNF771Q7L3S4 317 aaPredicted RBP12.48□□□□□ -0.41
LCN2-202ENST00000372998 CCDC51Q96ER9 411 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 LY9Q9HBG7 655 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 BRMS1Q9HCU9 246 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 ITGB4P16144 1822 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 TOGARAM1Q9Y4F4 1720 aa12.48□□□□□ -0.41
LCN2-202ENST00000372998 MYH6P13533 1939 aa12.47□□□□□ -0.41
LCN2-202ENST00000372998 SOS2Q07890 1332 aaPredicted RBP12.47□□□□□ -0.41
LCN2-202ENST00000372998 USP27XA6NNY8 438 aa12.47□□□□□ -0.41
LCN2-202ENST00000372998 KIF28PB7ZC32 967 aa12.47□□□□□ -0.41
LCN2-202ENST00000372998 IRS4O14654 1257 aaPredicted RBP12.47□□□□□ -0.41
LCN2-202ENST00000372998 WDHD1O75717 1129 aaPredicted RBP12.47□□□□□ -0.41
LCN2-202ENST00000372998 H2AFXP16104 143 aaPredicted RBP12.47□□□□□ -0.41
LCN2-202ENST00000372998 CDK11BP21127 795 aaKnown RBP12.47□□□□□ -0.41
LCN2-202ENST00000372998 LMOD1P29536 600 aaPredicted RBP12.47□□□□□ -0.41
LCN2-202ENST00000372998 WTAPQ15007 396 aa12.47□□□□□ -0.41
LCN2-202ENST00000372998 POSTNQ15063 836 aa12.47□□□□□ -0.41
LCN2-202ENST00000372998 NTRK3Q16288 839 aa12.47□□□□□ -0.41
LCN2-202ENST00000372998 RTN1Q16799 776 aa12.47□□□□□ -0.41
LCN2-202ENST00000372998 SHC4Q6S5L8 630 aa12.47□□□□□ -0.41
LCN2-202ENST00000372998 TMCO3Q6UWJ1 677 aa12.47□□□□□ -0.41
LCN2-202ENST00000372998 SYT10Q6XYQ8 523 aa12.47□□□□□ -0.41
LCN2-202ENST00000372998 IFNL3Q8IZI9 196 aa12.47□□□□□ -0.41
LCN2-202ENST00000372998 VGLL2Q8N8G2 317 aa12.47□□□□□ -0.41
LCN2-202ENST00000372998 FERMT2Q96AC1 680 aa12.47□□□□□ -0.41
LCN2-202ENST00000372998 RBM28Q9NW13 759 aaKnown RBP12.47□□□□□ -0.41
LCN2-202ENST00000372998 SRPRBQ9Y5M8 271 aaKnown RBP12.47□□□□□ -0.41
LCN2-202ENST00000372998 LAMB2P55268 1798 aa12.46□□□□□ -0.41
LCN2-202ENST00000372998 TCRBV5S4A2TA0A5A2 114 aa12.46□□□□□ -0.41
LCN2-202ENST00000372998 SPDYE4A6NLX3 237 aa12.46□□□□□ -0.41
LCN2-202ENST00000372998 B4E1Z4 1266 aa12.46□□□□□ -0.41
LCN2-202ENST00000372998 BIN1O00499 593 aa12.46□□□□□ -0.41
LCN2-202ENST00000372998 CASQ1P31415 396 aa12.46□□□□□ -0.41
LCN2-202ENST00000372998 IL6STP40189 918 aaPredicted RBP12.46□□□□□ -0.41
LCN2-202ENST00000372998 SCARF1Q14162 830 aa12.46□□□□□ -0.41
LCN2-202ENST00000372998 ARID5BQ14865 1188 aa12.46□□□□□ -0.41
LCN2-202ENST00000372998 PARP10Q53GL7 1025 aa12.46□□□□□ -0.41
LCN2-202ENST00000372998 SPECC1LQ69YQ0 1117 aa12.46□□□□□ -0.41
LCN2-202ENST00000372998 OTUD7BQ6GQQ9 843 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms