RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 DACT3Q96B18 629 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-201ENST00000334504 FAM83GA6ND36 823 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 ZNF500O60304 480 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-201ENST00000334504 IRX4P78413 519 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 NUDT16Q96DE0 195 aaKnown RBP10.93□□□□□ -0.66
COL4A6-201ENST00000334504 KLHL14Q9P2G3 628 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 PPP1R9AQ9ULJ8 1098 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 VWA3AA6NCI4 1184 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 RXRAP19793 462 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 ATL3Q6DD88 541 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 UBE3BQ7Z3V4 1068 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 RGS16O15492 202 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-201ENST00000334504 BAG3O95817 575 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 CTNNA1P35221 906 aaKnown RBP10.93□□□□□ -0.66
COL4A6-201ENST00000334504 GRIN2BQ13224 1484 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 EP400NLQ6ZTU2 488 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 MRFAP1L1Q96HT8 127 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 C6orf50Q9HD87 102 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 HDAC9Q9UKV0 1011 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 FAN1Q9Y2M0 1017 aa10.93□□□□□ -0.66
COL4A6-201ENST00000334504 TRAF5O00463 557 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 HS2ST1Q7LGA3 356 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 ZMAT2Q96NC0 199 aaKnown RBP10.92□□□□□ -0.66
COL4A6-201ENST00000334504 TMOD3Q9NYL9 352 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 IGF1RP08069 1367 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 GAS8O95995 478 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 TROVE2P10155 538 aaKnown RBP eCLIP10.92□□□□□ -0.662e-8■■■■■ 38.3
COL4A6-201ENST00000334504 E2F5Q15329 346 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 MSANTD4Q8NCY6 345 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 EFCC1Q9HA90 598 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 CABP5Q9NP86 173 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 DDX41Q9UJV9 622 aaKnown RBP10.92□□□□□ -0.66
COL4A6-201ENST00000334504 SYNJ2O15056 1496 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 CPA1P15085 419 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 KRT9P35527 623 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 ZNF174Q15697 407 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 RBM26Q5T8P6 1007 aaKnown RBP10.92□□□□□ -0.66
COL4A6-201ENST00000334504 AFAP1L2Q8N4X5 818 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 ARHGAP45Q92619 1136 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 RTL9Q8NET4 1388 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 UQCRFS1P1P0C7P4 283 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 NME9Q86XW9 330 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 Q9H521 79 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 MAPK8IP1Q9UQF2 711 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 IL16Q14005 1332 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 FAM71BQ8TC56 605 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 TNNQ9UQP3 1299 aa10.92□□□□□ -0.66
COL4A6-201ENST00000334504 CYP7A1P22680 504 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 BCAP29Q9UHQ4 241 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 EPB41P11171 864 aaKnown RBP10.91□□□□□ -0.66
COL4A6-201ENST00000334504 ATP8B2P98198 1209 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 PDE11AQ9HCR9 933 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 TAB2Q9NYJ8 693 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 LARSQ9P2J5 1176 aaKnown RBP10.91□□□□□ -0.66
COL4A6-201ENST00000334504 ZNF215Q9UL58 517 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-201ENST00000334504 LDHCP07864 332 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 GNAQP50148 359 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 PDE4DQ08499 809 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 MAP3K21Q5TCX8 1036 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 NUP58Q9BVL2 599 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 LMBRD1Q9NUN5 540 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 NCOA1Q15788 1441 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 RAD50Q92878 1312 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 C6orf229H3BNL8 230 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 CALML3P27482 149 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 SV2BQ7L1I2 683 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 ZBTB12Q9Y330 459 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-201ENST00000334504 SLC9C1Q4G0N8 1177 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 LRRC23Q53EV4 343 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-201ENST00000334504 MRPL50Q8N5N7 158 aaKnown RBP10.91□□□□□ -0.66
COL4A6-201ENST00000334504 ZNF408Q9H9D4 720 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 TSKSQ9UJT2 592 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 PPFIA2O75334 1257 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 TBC1D8O95759 1140 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 MAGEA1P43355 309 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 CCDC105Q8IYK2 499 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 KIFAP3Q92845 792 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 KIFC2Q96AC6 838 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 KCNH3Q9ULD8 1083 aa10.91□□□□□ -0.66
COL4A6-201ENST00000334504 ARAP1Q96P48 1450 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 HLA-DOAP06340 250 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 MX2P20592 715 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 TMED1Q13445 227 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 AMOTQ4VCS5 1084 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 EFCAB13Q8IY85 973 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 HVCN1Q96D96 273 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 VPS37BQ9H9H4 285 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 MAP3K1Q13233 1512 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 RPL13P26373 211 aaKnown RBP10.9□□□□□ -0.66
COL4A6-201ENST00000334504 CHMLP26374 656 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 PAK1Q13153 545 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 RPS6KA1Q15418 735 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 DHX32Q7L7V1 743 aaKnown RBP10.9□□□□□ -0.66
COL4A6-201ENST00000334504 FRMD4BQ9Y2L6 1034 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 EHBP1L1Q8N3D4 1523 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 EFCAB8A8MWE9 144 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 TNNI2P48788 182 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 PLEKHM2Q8IWE5 1019 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 SAR1BQ9Y6B6 198 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 BRD2P25440 801 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms