RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 SPTY2D1Q68D10 685 aaPredicted RBP16.66■□□□□ 0.26
CNOT9-201ENST00000273064 CASQ1P31415 396 aa16.66■□□□□ 0.26
CNOT9-201ENST00000273064 NAPAP54920 295 aa16.66■□□□□ 0.26
CNOT9-201ENST00000273064 SUSD4Q5VX71 490 aa16.66■□□□□ 0.26
CNOT9-201ENST00000273064 ZNF274Q96GC6 653 aaPredicted RBP16.66■□□□□ 0.26
CNOT9-201ENST00000273064 ZSWIM5Q9P217 1185 aa16.66■□□□□ 0.26
CNOT9-201ENST00000273064 NFE2L3Q9Y4A8 694 aa16.66■□□□□ 0.26
CNOT9-201ENST00000273064 CAVIN2O95810 425 aa16.66■□□□□ 0.26
CNOT9-201ENST00000273064 LDHBP07195 334 aaKnown RBP16.66■□□□□ 0.26
CNOT9-201ENST00000273064 LETM2Q2VYF4 491 aa16.66■□□□□ 0.26
CNOT9-201ENST00000273064 APOA5Q6Q788 366 aa16.66■□□□□ 0.26
CNOT9-201ENST00000273064 ZNF654Q8IZM8 581 aa16.66■□□□□ 0.26
CNOT9-201ENST00000273064 CEP89Q96ST8 783 aa16.66■□□□□ 0.26
CNOT9-201ENST00000273064 TCP11L1Q9NUJ3 509 aa16.66■□□□□ 0.26
CNOT9-201ENST00000273064 KIAA1468Q9P260 1216 aa16.66■□□□□ 0.26
CNOT9-201ENST00000273064 MYL5Q02045 173 aa16.65■□□□□ 0.26
CNOT9-201ENST00000273064 CCDC70Q6NSX1 233 aa16.65■□□□□ 0.26
CNOT9-201ENST00000273064 LCORLQ8N3X6 602 aa16.65■□□□□ 0.26
CNOT9-201ENST00000273064 SERTAD1Q9UHV2 236 aa16.65■□□□□ 0.26
CNOT9-201ENST00000273064 CCP110O43303 1012 aa16.65■□□□□ 0.26
CNOT9-201ENST00000273064 ZSCAN12O43309 604 aa16.65■□□□□ 0.26
CNOT9-201ENST00000273064 KCNQ2O43526 872 aa16.65■□□□□ 0.26
CNOT9-201ENST00000273064 RASGRF1Q13972 1273 aa16.65■□□□□ 0.26
CNOT9-201ENST00000273064 USPL1Q5W0Q7 1092 aa16.65■□□□□ 0.26
CNOT9-201ENST00000273064 TMEM87BQ96K49 555 aa16.65■□□□□ 0.26
CNOT9-201ENST00000273064 ATG3Q9NT62 314 aa16.65■□□□□ 0.26
CNOT9-201ENST00000273064 PATL2C9JE40 543 aaKnown RBP16.65■□□□□ 0.26
CNOT9-201ENST00000273064 TMCO3Q6UWJ1 677 aa16.65■□□□□ 0.26
CNOT9-201ENST00000273064 AEBP2Q6ZN18 517 aaPredicted RBP16.65■□□□□ 0.26
CNOT9-201ENST00000273064 CACTINQ8WUQ7 758 aaKnown RBP16.65■□□□□ 0.26
CNOT9-201ENST00000273064 CCDC102AQ96A19 550 aa16.65■□□□□ 0.26
CNOT9-201ENST00000273064 SEPT11Q9NVA2 429 aaKnown RBP16.65■□□□□ 0.26
CNOT9-201ENST00000273064 NRKQ7Z2Y5 1582 aa16.65■□□□□ 0.26
CNOT9-201ENST00000273064 RPS8P62241 208 aaKnown RBP16.65■□□□□ 0.26
CNOT9-201ENST00000273064 SRP68Q9UHB9 627 aaKnown RBP16.65■□□□□ 0.26
CNOT9-201ENST00000273064 TNKSO95271 1327 aa16.64■□□□□ 0.25
CNOT9-201ENST00000273064 MYOM1P52179 1685 aa16.64■□□□□ 0.25
CNOT9-201ENST00000273064 ADKP55263 362 aaKnown RBP16.64■□□□□ 0.25
CNOT9-201ENST00000273064 FOXO4P98177 505 aa16.64■□□□□ 0.25
CNOT9-201ENST00000273064 AXDND1Q5T1B0 1012 aaPredicted RBP16.64■□□□□ 0.25
CNOT9-201ENST00000273064 TGFBRAP1Q8WUH2 860 aa16.64■□□□□ 0.25
CNOT9-201ENST00000273064 PKNOX2Q96KN3 472 aa16.64■□□□□ 0.25
CNOT9-201ENST00000273064 KRT2P35908 639 aa16.64■□□□□ 0.25
CNOT9-201ENST00000273064 TNNI2P48788 182 aa16.64■□□□□ 0.25
CNOT9-201ENST00000273064 ATG9AQ7Z3C6 839 aa16.64■□□□□ 0.25
CNOT9-201ENST00000273064 CENPHQ9H3R5 247 aa16.64■□□□□ 0.25
CNOT9-201ENST00000273064 PUF60Q9UHX1 559 aaKnown RBP16.64■□□□□ 0.25
CNOT9-201ENST00000273064 BAZ2BQ9UIF8 2168 aaKnown RBP16.64■□□□□ 0.25
CNOT9-201ENST00000273064 KIF5CO60282 957 aa16.64■□□□□ 0.25
CNOT9-201ENST00000273064 TFAP4Q01664 338 aa16.64■□□□□ 0.25
CNOT9-201ENST00000273064 ARID5AQ03989 594 aa16.64■□□□□ 0.25
CNOT9-201ENST00000273064 RESTQ13127 1097 aa16.64■□□□□ 0.25
CNOT9-201ENST00000273064 TDRD12Q587J7 1177 aaKnown RBP16.64■□□□□ 0.25
CNOT9-201ENST00000273064 ADALQ6DHV7 355 aa16.64■□□□□ 0.25
CNOT9-201ENST00000273064 CARMIL3Q8ND23 1372 aa16.64■□□□□ 0.25
CNOT9-201ENST00000273064 DDIT3P35638 169 aa16.63■□□□□ 0.25
CNOT9-201ENST00000273064 PPARAQ07869 468 aa16.63■□□□□ 0.25
CNOT9-201ENST00000273064 SMYD4Q8IYR2 804 aaPredicted RBP16.63■□□□□ 0.25
CNOT9-201ENST00000273064 RASGRP4Q8TDF6 673 aa16.63■□□□□ 0.25
CNOT9-201ENST00000273064 ELP1O95163 1332 aa16.63■□□□□ 0.25
CNOT9-201ENST00000273064 UFL1O94874 794 aa16.63■□□□□ 0.25
CNOT9-201ENST00000273064 GPKOWQ92917 476 aaPredicted RBP eCLIP16.63■□□□□ 0.257e-6■■■■■ 33.4
CNOT9-201ENST00000273064 SMARCC1Q92922 1105 aaPredicted RBP16.63■□□□□ 0.25
CNOT9-201ENST00000273064 GPCPD1Q9NPB8 672 aa16.63■□□□□ 0.25
CNOT9-201ENST00000273064 PPLO60437 1756 aa16.63■□□□□ 0.25
CNOT9-201ENST00000273064 ASIC1P78348 528 aa16.63■□□□□ 0.25
CNOT9-201ENST00000273064 RAD51AP2Q09MP3 1159 aa16.63■□□□□ 0.25
CNOT9-201ENST00000273064 BMP2KQ9NSY1 1161 aaPredicted RBP16.63■□□□□ 0.25
CNOT9-201ENST00000273064 FANCLQ9NW38 375 aa16.63■□□□□ 0.25
CNOT9-201ENST00000273064 NEMFO60524 1076 aa16.62■□□□□ 0.25
CNOT9-201ENST00000273064 JAKMIP3Q5VZ66 844 aa16.62■□□□□ 0.25
CNOT9-201ENST00000273064 DESI2Q9BSY9 194 aa16.62■□□□□ 0.25
CNOT9-201ENST00000273064 MMRN2Q9H8L6 949 aa16.62■□□□□ 0.25
CNOT9-201ENST00000273064 PCDHA5Q9Y5H7 936 aa16.62■□□□□ 0.25
CNOT9-201ENST00000273064 KIAA1210Q9ULL0 1709 aa16.62■□□□□ 0.25
CNOT9-201ENST00000273064 ANKARQ7Z5J8 1434 aa16.62■□□□□ 0.25
CNOT9-201ENST00000273064 LDHCP07864 332 aa16.62■□□□□ 0.25
CNOT9-201ENST00000273064 CASP1P29466 404 aa16.62■□□□□ 0.25
CNOT9-201ENST00000273064 TCERG1LQ5VWI1 586 aa16.62■□□□□ 0.25
CNOT9-201ENST00000273064 GNAT2P19087 354 aa16.62■□□□□ 0.25
CNOT9-201ENST00000273064 TRIM21P19474 475 aaKnown RBP16.62■□□□□ 0.25
CNOT9-201ENST00000273064 FKBP15Q5T1M5 1219 aa16.62■□□□□ 0.25
CNOT9-201ENST00000273064 TBC1D10CQ8IV04 446 aa16.62■□□□□ 0.25
CNOT9-201ENST00000273064 FANCBQ8NB91 859 aa16.62■□□□□ 0.25
CNOT9-201ENST00000273064 DEXIO95424 95 aa16.61■□□□□ 0.25
CNOT9-201ENST00000273064 ATP1A3P13637 1013 aa16.61■□□□□ 0.25
CNOT9-201ENST00000273064 ADD2P35612 726 aa16.61■□□□□ 0.25
CNOT9-201ENST00000273064 ERFEQ4G0M1 354 aa16.61■□□□□ 0.25
CNOT9-201ENST00000273064 ZFYVE27Q5T4F4 411 aa16.61■□□□□ 0.25
CNOT9-201ENST00000273064 CACNA2D4Q7Z3S7 1137 aa16.61■□□□□ 0.25
CNOT9-201ENST00000273064 MYO1BO43795 1136 aa16.61■□□□□ 0.25
CNOT9-201ENST00000273064 ZNF287Q9HBT7 754 aa16.61■□□□□ 0.25
CNOT9-201ENST00000273064 TMEM131LA2VDJ0 1609 aa16.61■□□□□ 0.25
CNOT9-201ENST00000273064 PREX1Q8TCU6 1659 aa16.61■□□□□ 0.25
CNOT9-201ENST00000273064 TOM1O60784 492 aa16.61■□□□□ 0.25
CNOT9-201ENST00000273064 PPARDQ03181 441 aa16.61■□□□□ 0.25
CNOT9-201ENST00000273064 TCP10Q12799 353 aa16.61■□□□□ 0.25
CNOT9-201ENST00000273064 PARP10Q53GL7 1025 aa16.61■□□□□ 0.25
CNOT9-201ENST00000273064 TEX11Q8IYF3 940 aa16.61■□□□□ 0.25
CNOT9-201ENST00000273064 CNBD1Q8NA66 436 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms