RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 A0A1W2PQ64 194 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 A0A1W2PQD8 194 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 CTIFO43310 598 aaKnown RBP25.74■■□□□ 1.71
CCDC9-201ENST00000221922 LIFRP42702 1097 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 CAVIN4Q5BKX8 364 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 ADALQ6DHV7 355 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 RAB11FIP4Q86YS3 637 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 FSIP1Q8NA03 581 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 IGDCC4Q8TDY8 1250 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 CACTINQ8WUQ7 758 aaKnown RBP25.74■■□□□ 1.71
CCDC9-201ENST00000221922 ANO10Q9NW15 660 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 DENND2AQ9ULE3 1009 aa25.74■■□□□ 1.71
CCDC9-201ENST00000221922 COL1A1P02452 1464 aaPredicted RBP25.74■■□□□ 1.71
CCDC9-201ENST00000221922 ZBTB43O43298 467 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 GYG1P46976 350 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 STK38Q15208 465 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 CCDC144BQ3MJ40 725 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 OTUD7BQ6GQQ9 843 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 CCDC144CPQ8IYA2 1237 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 MRPS27Q92552 414 aaKnown RBP25.73■■□□□ 1.71
CCDC9-201ENST00000221922 ZMYND15Q9H091 742 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 RPS8P62241 208 aaKnown RBP25.73■■□□□ 1.71
CCDC9-201ENST00000221922 TMEM67Q5HYA8 995 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 MYSM1Q5VVJ2 828 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 FMR1NBQ8N0W7 255 aaPredicted RBP25.73■■□□□ 1.71
CCDC9-201ENST00000221922 LCORLQ8N3X6 602 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 LINC00301Q8NCQ3 95 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 PCDHA7Q9UN72 937 aa25.73■■□□□ 1.71
CCDC9-201ENST00000221922 SF3A1Q15459 793 aaKnown RBP25.72■■□□□ 1.71
CCDC9-201ENST00000221922 AKNAD1Q5T1N1 836 aa25.72■■□□□ 1.71
CCDC9-201ENST00000221922 SYNE3Q6ZMZ3 975 aa25.72■■□□□ 1.71
CCDC9-201ENST00000221922 NFXL1Q6ZNB6 911 aa25.72■■□□□ 1.71
CCDC9-201ENST00000221922 DHX40Q8IX18 779 aaKnown RBP25.72■■□□□ 1.71
CCDC9-201ENST00000221922 LY9Q9HBG7 655 aa25.72■■□□□ 1.71
CCDC9-201ENST00000221922 AFF2P51816 1311 aa25.72■■□□□ 1.71
CCDC9-201ENST00000221922 KIF23Q02241 960 aaPredicted RBP25.72■■□□□ 1.71
CCDC9-201ENST00000221922 AMIGO3Q86WK7 504 aa25.72■■□□□ 1.71
CCDC9-201ENST00000221922 CACNA1SQ13698 1873 aa25.71■■□□□ 1.71
CCDC9-201ENST00000221922 ECM29Q5VYK3 1845 aa25.71■■□□□ 1.71
CCDC9-201ENST00000221922 SEMA3EO15041 775 aa25.71■■□□□ 1.71
CCDC9-201ENST00000221922 NEMFO60524 1076 aa25.71■■□□□ 1.71
CCDC9-201ENST00000221922 MFSD6Q6ZSS7 791 aa25.71■■□□□ 1.71
CCDC9-201ENST00000221922 ALG1Q9BT22 464 aa25.71■■□□□ 1.71
CCDC9-201ENST00000221922 SLC4A4Q9Y6R1 1079 aa25.71■■□□□ 1.71
CCDC9-201ENST00000221922 POLR3DP05423 398 aaPredicted RBP25.7■■□□□ 1.71
CCDC9-201ENST00000221922 TDO2P48775 406 aa25.7■■□□□ 1.71
CCDC9-201ENST00000221922 NKX2-3Q8TAU0 364 aa25.7■■□□□ 1.71
CCDC9-201ENST00000221922 STAG1Q8WVM7 1258 aa25.7■■□□□ 1.71
CCDC9-201ENST00000221922 FAM84BQ96KN1 310 aaPredicted RBP25.7■■□□□ 1.71
CCDC9-201ENST00000221922 MTA3Q9BTC8 594 aa25.7■■□□□ 1.71
CCDC9-201ENST00000221922 ANKRD2Q9GZV1 360 aa25.7■■□□□ 1.71
CCDC9-201ENST00000221922 IQSEC3Q9UPP2 1182 aaPredicted RBP25.7■■□□□ 1.71
CCDC9-201ENST00000221922 PDS5AQ29RF7 1337 aaKnown RBP25.7■■□□□ 1.71
CCDC9-201ENST00000221922 GOLGA8AA7E2F4 631 aa25.7■■□□□ 1.7
CCDC9-201ENST00000221922 CYP7A1P22680 504 aa25.7■■□□□ 1.7
CCDC9-201ENST00000221922 MICU3Q86XE3 530 aa25.7■■□□□ 1.7
CCDC9-201ENST00000221922 LRRC8AQ8IWT6 810 aa25.7■■□□□ 1.7
CCDC9-201ENST00000221922 TNRC6CQ9HCJ0 1690 aaKnown RBP25.69■■□□□ 1.7
CCDC9-201ENST00000221922 IFIT3O14879 490 aaKnown RBP25.69■■□□□ 1.7
CCDC9-201ENST00000221922 CTDSPL2Q05D32 466 aa25.69■■□□□ 1.7
CCDC9-201ENST00000221922 FBXO33Q7Z6M2 555 aa25.69■■□□□ 1.7
CCDC9-201ENST00000221922 VPS37DQ86XT2 251 aa25.69■■□□□ 1.7
CCDC9-201ENST00000221922 ZSWIM5Q9P217 1185 aa25.69■■□□□ 1.7
CCDC9-201ENST00000221922 MYH13Q9UKX3 1938 aa25.69■■□□□ 1.7
CCDC9-201ENST00000221922 NID2Q14112 1375 aa25.69■■□□□ 1.7
CCDC9-201ENST00000221922 STK36Q9NRP7 1315 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 CCDC69A6NI79 296 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 WTIPA6NIX2 430 aaPredicted RBP25.68■■□□□ 1.7
CCDC9-201ENST00000221922 BECN2A8MW95 431 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 SPTLC2O15270 562 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 PRKAB2O43741 272 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 SART3Q15020 963 aaKnown RBP25.68■■□□□ 1.7
CCDC9-201ENST00000221922 CEP57L1Q8IYX8 460 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 RNF41Q9H4P4 317 aaPredicted RBP25.68■■□□□ 1.7
CCDC9-201ENST00000221922 TRPC5Q9UL62 973 aaPredicted RBP25.68■■□□□ 1.7
CCDC9-201ENST00000221922 SLC12A7Q9Y666 1083 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 CLIC4Q9Y696 253 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 RBM6P78332 1123 aaKnown RBP25.68■■□□□ 1.7
CCDC9-201ENST00000221922 TRAPPC3LQ5T215 181 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 ANKRD7Q92527 254 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 ABCF2Q9UG63 623 aa25.68■■□□□ 1.7
CCDC9-201ENST00000221922 CDC27P30260 824 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 RFC4P35249 363 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 IARSP41252 1262 aaKnown RBP25.67■■□□□ 1.7
CCDC9-201ENST00000221922 ANO1Q5XXA6 986 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 NAT10Q9H0A0 1025 aaKnown RBP25.67■■□□□ 1.7
CCDC9-201ENST00000221922 RAI14Q9P0K7 980 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 SMTNL1A8MU46 457 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 KIF28PB7ZC32 967 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 ZBTB22O15209 634 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 ADGRA1Q86SQ6 560 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 SEPT12Q8IYM1 358 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 MIGA1Q8NAN2 632 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 C16orf45Q96MC5 204 aaPredicted RBP25.67■■□□□ 1.7
CCDC9-201ENST00000221922 BCL11BQ9C0K0 894 aaPredicted RBP25.67■■□□□ 1.7
CCDC9-201ENST00000221922 SENP2Q9HC62 589 aa25.67■■□□□ 1.7
CCDC9-201ENST00000221922 TM4SF1P30408 202 aa25.66■■□□□ 1.7
CCDC9-201ENST00000221922 HSPA1LP34931 641 aa25.66■■□□□ 1.7
CCDC9-201ENST00000221922 TRIM29Q14134 588 aa25.66■■□□□ 1.7
CCDC9-201ENST00000221922 NTRK3Q16288 839 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms