RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Slc4a1P04919 929 aa12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Scp2P32020 547 aaKnown RBP12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Bag1Q60739 355 aa12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 CerkQ8K4Q7 531 aa12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Fam213aQ9CYH2 218 aa12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Prr5lA2AVJ5 370 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Eif5P59325 429 aaKnown RBP12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Smarcc1P97496 1104 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 BcanQ61361 883 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Tmem87aQ8BXN9 555 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Q8CEZ4 452 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Tbc1d7Q9D0K0 293 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Rapgef4Q9EQZ6 1011 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Col22a1E9Q7P1 1613 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 TnksQ6PFX9 1320 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 HalP35492 657 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Phc3Q8CHP6 981 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 MbipQ99LQ1 341 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Sugt1Q9CX34 336 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Zcrb1Q9CZ96 217 aaKnown RBP12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Desi2Q9D291 194 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 IncenpQ9WU62 880 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Trip6Q9Z1Y4 480 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Abca3Q8R420 1704 aa12.32□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Rgs12Q8CGE9 1381 aa12.31□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Gm43638A0A0J9YU36 694 aa12.31□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ccdc121E9Q6D3 323 aa12.31□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 GptQ8QZR5 496 aa12.31□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 AtrnQ9WU60 1428 aa12.31□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Cep55Q8BT07 462 aa12.31□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Cdc45Q9Z1X9 566 aa12.31□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Calcoco2A2A6M5 331 aa12.31□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Gm13023A2A8N2 498 aa12.31□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Dnm1P39053 867 aa12.31□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ccdc34Q3UI66 367 aa12.31□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Prdm1Q60636 856 aa12.31□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Fam170aQ66LM6 333 aa12.31□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Mtmr6Q8VE11 617 aa12.31□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ncoa5Q91W39 579 aaKnown RBP12.31□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Arhgap33Q80YF9 1305 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ssc5dQ8BV57 1371 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ugt1a6bK9J7B2 531 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Usp13Q5BKP2 858 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ankrd40Q5SUE8 363 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Dpf2Q61103 391 aaKnown RBP12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ugt1a6Q64435 531 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ncoa7Q6DFV7 943 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ugt1a7cQ6ZQM8 531 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Klhl30Q8C3F7 581 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Nek9Q8K1R7 984 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Kri1Q8VDQ9 704 aaKnown RBP12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Kndc1Q0KK55 1742 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Tshz1Q5DTH5 1084 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Znf653Q6YND2 615 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Kiaa0319lQ8K135 1048 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ciao1Q99KN2 339 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ankrd1Q9CR42 319 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ehd4Q9EQP2 541 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Zcchc17Q9ESX4 241 aaKnown RBP12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Vnn1Q9Z0K8 512 aa12.3□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Sipa1l3G3X9J0 1776 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Gm3409A0A0G2JE67 319 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 A0A0U1RNP2 1173 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Psmb7P70195 277 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Pald1P70261 859 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Nol10Q5RJG1 687 aaKnown RBP12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Esco1Q69Z69 843 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Abcf1Q6P542 837 aaKnown RBP12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Slf2Q6P9P0 1278 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Tmem59lQ7TNI2 337 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Fsd2Q8BZ52 692 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 DymQ8CHY3 669 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Sil1Q9EPK6 465 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Casz1Q9CWL2 1761 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Cyp3a57D3YYZ0 503 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Arglu1Q3UL36 271 aaKnown RBP12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Gm28047Q3US59 414 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Fbxw10Q5SUS0 1030 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Kiaa0319Q5SZV5 1081 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Lamb3Q61087 1168 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Gnl3lQ6PGG6 577 aaKnown RBP12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Atp1a2Q6PIE5 1020 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ppp2r2cQ8BG02 447 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Necab1Q8BG18 352 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Tmco3Q8BH01 678 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Afg3l2Q8JZQ2 802 aaKnown RBP12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Tada3Q8R0L9 432 aa12.29□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 GalcP54818 684 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Klra5Q60652 266 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Krt39Q6IFX4 482 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Znf513Q6PD29 541 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ppp4r3bQ922R5 820 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Yeats4Q9CR11 227 aaKnown RBP12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Smc1aQ9CU62 1233 aaKnown RBP12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 EcsitQ9QZH6 435 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 TsksO54887 585 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ovgp1Q62010 721 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Shisa4Q8CA71 197 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 AmotQ8VHG2 1126 aa12.28□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Telo2Q9DC40 840 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 42.3 ms