RNA–Protein interactions for RNA: ENSMUST00000035661.6

Cspg4-201, Transcript of Chondroitin sulfate proteoglycan 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cspg4, Length 8,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4-201ENSMUST00000035661 Slc39a6Q8C145 765 aa11.03□□□□□ -0.64
Cspg4-201ENSMUST00000035661 Plbd2Q3TCN2 594 aa11.03□□□□□ -0.64
Cspg4-201ENSMUST00000035661 Rtn1Q8K0T0 780 aa11.03□□□□□ -0.64
Cspg4-201ENSMUST00000035661 Speer4f2E9Q366 295 aa11.02□□□□□ -0.64
Cspg4-201ENSMUST00000035661 Gna11P21278 359 aa11.02□□□□□ -0.64
Cspg4-201ENSMUST00000035661 Dnm1P39053 867 aa11.02□□□□□ -0.64
Cspg4-201ENSMUST00000035661 Snapc4Q8BP86 1333 aa11.02□□□□□ -0.64
Cspg4-201ENSMUST00000035661 Kifc2O08672 792 aa11.02□□□□□ -0.64
Cspg4-201ENSMUST00000035661 Igflr1Q3U4N7 345 aa11.02□□□□□ -0.64
Cspg4-201ENSMUST00000035661 Smarcc2Q6PDG5 1213 aa11.02□□□□□ -0.64
Cspg4-201ENSMUST00000035661 Rnf168Q80XJ2 565 aa11.02□□□□□ -0.64
Cspg4-201ENSMUST00000035661 Tshz3Q8CGV9 1081 aa11.02□□□□□ -0.64
Cspg4-201ENSMUST00000035661 Fbxo3Q9DC63 480 aa11.02□□□□□ -0.64
Cspg4-201ENSMUST00000035661 Sclt1G5E861 688 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Swap70Q6A028 585 aaKnown RBP11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Traf1P39428 409 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Pla2g4fQ50L41 855 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Pkd2l2Q9JLG4 621 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Irx4Q9QY61 515 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Gbp6A0A0G2JDV3 611 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Gm43302L7N1X8 611 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 ClgnP52194 611 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Zbtb38Q3LR78 1197 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Grpel1Q99LP6 217 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Pard3Q99NH2 1333 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Prl3d1P18121 224 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 PcQ05920 1178 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Krt77Q6IFZ6 572 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Liat1Q810M6 228 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Rbbp5Q8BX09 538 aaKnown RBP11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 DymQ8CHY3 669 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 ParnQ8VDG3 624 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Pcdhb5Q91XZ5 792 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Klhl10Q9D5V2 608 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 DnmbpQ6TXD4 1580 aa11.02□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Atad3Q925I1 591 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Zfp397Q7TNK4 527 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Disp3A3KFU9 1347 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Utp18Q5SSI6 552 aaKnown RBP11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 WaplQ65Z40 1200 aaKnown RBP11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Kif1bpQ6ZPU9 617 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Usp37Q8C0R0 979 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Aifm3Q3TY86 605 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Luc7l3Q5SUF2 432 aaKnown RBP11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Tti2Q8BGV4 512 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Apbb1ipQ8R5A3 670 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Tex19.1Q99MV2 351 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Trpc3Q9QZC1 836 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Nedd9O35177 833 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Syt1P46096 421 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Tmtc2Q56A06 836 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Ccdc122Q8BVN0 290 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Ppp6r3Q922D4 844 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Usp25P57080 1055 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 HmcesQ8R1M0 353 aaKnown RBP11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Rfwd2Q9R1A8 733 aaKnown RBP11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Kif13aQ9EQW7 1749 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Enox2Q8R0Z2 598 aa11.01□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Adamts13Q769J6 1426 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Atg4a-psA0A0G2JFS9 396 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Lrrc23O35125 340 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Eef1dP57776 281 aaKnown RBP11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Haus1Q8BHX1 278 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Miga2Q8BK03 593 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Rps6kb1Q8BSK8 525 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Atg4aQ8C9S8 396 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Znf394Q9Z1D9 521 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Eps15P42567 897 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Mybl2P48972 704 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Nlrp9aQ66X03 949 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Ankrd23Q812A3 306 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Usp11Q99K46 921 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 CltaO08585 235 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Kif22Q3V300 660 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Krt15Q61414 452 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Zfp251Q6PCX8 632 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Npc1l1Q6T3U4 1333 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 1700029H14RikE9PY36 240 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Cfap73J3QPZ5 306 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Dcaf5Q80T85 946 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Tuft1O08970 390 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Dapk3O54784 448 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Tmed8Q3UHI4 326 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 ErmnQ5EBJ4 281 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Ift88Q61371 824 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Nap1l4Q78ZA7 375 aaKnown RBP11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Prpf31Q8CCF0 499 aaKnown RBP11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Plcd3Q8K2J0 785 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Zmat2Q9CPW7 199 aa11□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Cct6bQ61390 531 aa10.99□□□□□ -0.65
Cspg4-201ENSMUST00000035661 MarsQ68FL6 902 aaKnown RBP10.99□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Pdzrn3Q69ZS0 1063 aa10.99□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Trim17Q7TPM3 477 aa10.99□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Clasp2Q8BRT1 1286 aaKnown RBP10.99□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Trpm1Q2TV84 1622 aa10.99□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Zkscan16A2ALW2 728 aa10.99□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Trim52Q8CDV4 233 aa10.99□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Lzts2Q91YU6 671 aa10.99□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Tbc1d8Q9Z1A9 1134 aa10.99□□□□□ -0.65
Cspg4-201ENSMUST00000035661 Gas2l2Q5SSG4 860 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms