RNA–Protein interactions for RNA: YPR182W

SMX3, Transcript of Core Sm protein Sm F, yeastyeast

Gene SMX3, Length 261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMX3YPR182W NTE1Q04958 1679 aa10.31□□□□□ -0.76
SMX3YPR182W TAF7Q05021 590 aa10.31□□□□□ -0.76
SMX3YPR182W SNT2P53127 1403 aa10.3□□□□□ -0.76
SMX3YPR182W RPO21P04050 1733 aaKnown RBP10.28□□□□□ -0.76
SMX3YPR182W ULS1Q08562 1619 aa10.27□□□□□ -0.77
SMX3YPR182W PDR15Q04182 1529 aaKnown RBP10.27□□□□□ -0.77
SMX3YPR182W NUP159P40477 1460 aa10.24□□□□□ -0.77
SMX3YPR182W YRF1-1P0CX20 1796 aa10.21□□□□□ -0.77
SMX3YPR182W YRF1-5P0CX21 1796 aa10.21□□□□□ -0.77
SMX3YPR182W YRF1-8P0CX22 1796 aa10.21□□□□□ -0.77
SMX3YPR182W GEA2P39993 1459 aaKnown RBP10.18□□□□□ -0.78
SMX3YPR182W GEA1P47102 1408 aaPredicted RBP10.16□□□□□ -0.78
SMX3YPR182W RTT106P40161 455 aa10.15□□□□□ -0.78
SMX3YPR182W IRC20Q06554 1556 aa10.14□□□□□ -0.79
SMX3YPR182W PDR12Q02785 1511 aa10.12□□□□□ -0.79
SMX3YPR182W IFH1P39520 1085 aa10.11□□□□□ -0.79
SMX3YPR182W VPS15P22219 1454 aa10.1□□□□□ -0.79
SMX3YPR182W LTE1P07866 1435 aa10.09□□□□□ -0.79
SMX3YPR182W MET10P39692 1035 aa10.09□□□□□ -0.79
SMX3YPR182W SPO14P36126 1683 aa10.08□□□□□ -0.8
SMX3YPR182W TY3B-GQ99315 1547 aa10.07□□□□□ -0.8
SMX3YPR182W GDB1Q06625 1536 aa10.05□□□□□ -0.8
SMX3YPR182W CAT8P39113 1433 aa10.05□□□□□ -0.8
SMX3YPR182W YBT1P32386 1661 aa10.05□□□□□ -0.8
SMX3YPR182W IKI3Q06706 1349 aaKnown RBP10.02□□□□□ -0.81
SMX3YPR182W PDR10P51533 1564 aa10.01□□□□□ -0.81
SMX3YPR182W BFR2Q06631 534 aaKnown RBP10□□□□□ -0.81
SMX3YPR182W NUP170P38181 1502 aa10□□□□□ -0.81
SMX3YPR182W NUP157P40064 1391 aaKnown RBP9.98□□□□□ -0.81
SMX3YPR182W IQG1Q12280 1495 aa9.94□□□□□ -0.82
SMX3YPR182W BNI1P41832 1953 aa9.94□□□□□ -0.82
SMX3YPR182W BUD3P25558 1636 aa9.93□□□□□ -0.82
SMX3YPR182W ARO1P08566 1588 aaKnown RBP9.93□□□□□ -0.82
SMX3YPR182W DRS2P39524 1355 aa9.91□□□□□ -0.82
SMX3YPR182W SEC7P11075 2009 aaKnown RBP9.87□□□□□ -0.83
SMX3YPR182W SRB8P25648 1427 aa9.86□□□□□ -0.83
SMX3YPR182W ITT1Q04638 464 aa9.86□□□□□ -0.83
SMX3YPR182W DOP1Q03921 1698 aa9.86□□□□□ -0.83
SMX3YPR182W YSP2Q06681 1438 aa9.85□□□□□ -0.83
SMX3YPR182W TRM3Q07527 1436 aa9.85□□□□□ -0.83
SMX3YPR182W SSM4P40318 1319 aa9.84□□□□□ -0.83
SMX3YPR182W CKB1P43639 278 aa9.84□□□□□ -0.83
SMX3YPR182W TFA1P36100 482 aa9.81□□□□□ -0.84
SMX3YPR182W MMS1Q06211 1407 aa9.8□□□□□ -0.84
SMX3YPR182W CHC1P22137 1653 aaKnown RBP9.78□□□□□ -0.84
SMX3YPR182W BNR1P40450 1375 aa9.75□□□□□ -0.85
SMX3YPR182W BUD21Q08492 214 aaPredicted RBP9.72□□□□□ -0.85
SMX3YPR182W GCN2P15442 1659 aa9.69□□□□□ -0.86
SMX3YPR182W DNF2Q12675 1612 aa9.69□□□□□ -0.86
SMX3YPR182W YOR093CQ12275 1648 aa9.6□□□□□ -0.87
SMX3YPR182W NUP188P52593 1655 aaKnown RBP9.59□□□□□ -0.87
SMX3YPR182W PDR5P33302 1511 aaKnown RBP9.58□□□□□ -0.88
SMX3YPR182W VMR1P38735 1592 aa9.55□□□□□ -0.88
SMX3YPR182W URN1Q06525 465 aaKnown RBP9.55□□□□□ -0.88
SMX3YPR182W IML1P47170 1584 aa9.51□□□□□ -0.89
SMX3YPR182W ABP1P15891 592 aaKnown RBP9.51□□□□□ -0.89
SMX3YPR182W YAP3P38749 330 aa9.51□□□□□ -0.89
SMX3YPR182W HAP1P0CE41 1502 aa9.48□□□□□ -0.89
SMX3YPR182W IPL1P38991 367 aa9.48□□□□□ -0.89
SMX3YPR182W DNF3Q12674 1656 aa9.48□□□□□ -0.89
SMX3YPR182W PAF1P38351 445 aa9.47□□□□□ -0.89
SMX3YPR182W PDR11P40550 1411 aa9.47□□□□□ -0.89
SMX3YPR182W NOP7P53261 605 aaKnown RBP9.45□□□□□ -0.9
SMX3YPR182W RAV1P47104 1357 aa9.45□□□□□ -0.9
SMX3YPR182W TYS1P36421 394 aaKnown RBP9.42□□□□□ -0.9
SMX3YPR182W RTC1Q08281 1341 aa9.4□□□□□ -0.9
SMX3YPR182W NUP192P47054 1683 aa9.33□□□□□ -0.92
SMX3YPR182W MIF2P35201 549 aa9.33□□□□□ -0.92
SMX3YPR182W MAK10Q02197 733 aa9.33□□□□□ -0.92
SMX3YPR182W AVT3P36062 692 aa9.32□□□□□ -0.92
SMX3YPR182W DIP2Q12220 943 aaPredicted RBP9.29□□□□□ -0.92
SMX3YPR182W ESL2P36168 1195 aa9.27□□□□□ -0.93
SMX3YPR182W BCK1Q01389 1478 aa9.27□□□□□ -0.93
SMX3YPR182W TY3B-IQ7LHG5 1498 aaKnown RBP9.27□□□□□ -0.93
SMX3YPR182W TY1B-NL2Q99337 1749 aaKnown RBP9.26□□□□□ -0.93
SMX3YPR182W USO1P25386 1790 aa9.24□□□□□ -0.93
SMX3YPR182W ALD4P46367 519 aaKnown RBP9.24□□□□□ -0.93
SMX3YPR182W TAF5P38129 798 aa9.23□□□□□ -0.93
SMX3YPR182W POL5P39985 1022 aaKnown RBP9.23□□□□□ -0.93
SMX3YPR182W RAD9P14737 1309 aa9.21□□□□□ -0.94
SMX3YPR182W CFT1Q06632 1357 aaKnown RBP9.2□□□□□ -0.94
SMX3YPR182W MRX12P47084 519 aa9.19□□□□□ -0.94
SMX3YPR182W KRE5P22023 1365 aa9.18□□□□□ -0.94
SMX3YPR182W CAB1Q04430 367 aa9.18□□□□□ -0.94
SMX3YPR182W NAP1P25293 417 aaKnown RBP9.15□□□□□ -0.94
SMX3YPR182W KIP3P53086 805 aaKnown RBP9.15□□□□□ -0.94
SMX3YPR182W YMR196WQ04336 1088 aa9.15□□□□□ -0.94
SMX3YPR182W YLR419WQ06698 1435 aaKnown RBP9.14□□□□□ -0.95
SMX3YPR182W SCT1P32784 759 aa9.14□□□□□ -0.95
SMX3YPR182W RIA1P53893 1110 aa9.14□□□□□ -0.95
SMX3YPR182W TAF8Q03750 510 aa9.14□□□□□ -0.95
SMX3YPR182W SPE2P21182 396 aa9.13□□□□□ -0.95
SMX3YPR182W ORC1P54784 914 aaPredicted RBP9.11□□□□□ -0.95
SMX3YPR182W MHP1P43638 1398 aa9.11□□□□□ -0.95
SMX3YPR182W YNR029CP53729 429 aaKnown RBP9.1□□□□□ -0.95
SMX3YPR182W THI12P42883 340 aa9.06□□□□□ -0.96
SMX3YPR182W THI5P43534 340 aa9.06□□□□□ -0.96
SMX3YPR182W YFR006WP43590 535 aa9.06□□□□□ -0.96
SMX3YPR182W THI11P47183 340 aa9.06□□□□□ -0.96
SMX3YPR182W THI13Q07748 340 aa9.06□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms