RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W IKI3Q06706 1349 aaKnown RBP8.29□□□□□ -1.08
RPN7YPR108W OXP1P28273 1286 aa8.29□□□□□ -1.08
RPN7YPR108W YCF1P39109 1515 aaKnown RBP8.29□□□□□ -1.08
RPN7YPR108W IFH1P39520 1085 aa8.25□□□□□ -1.09
RPN7YPR108W SPP41P38904 1435 aa8.25□□□□□ -1.09
RPN7YPR108W YAP5P40574 245 aa8.24□□□□□ -1.09
RPN7YPR108W SNQ2P32568 1501 aaKnown RBP8.22□□□□□ -1.09
RPN7YPR108W TRM732Q03496 1420 aa8.2□□□□□ -1.1
RPN7YPR108W TSC11P40061 1430 aa8.19□□□□□ -1.1
RPN7YPR108W IOC2Q12072 812 aa8.18□□□□□ -1.1
RPN7YPR108W PAN1P32521 1480 aa8.18□□□□□ -1.1
RPN7YPR108W ULI1P43604 169 aa8.15□□□□□ -1.1
RPN7YPR108W GEA1P47102 1408 aaPredicted RBP8.14□□□□□ -1.11
RPN7YPR108W SCT1P32784 759 aa8.14□□□□□ -1.11
RPN7YPR108W MET10P39692 1035 aa8.13□□□□□ -1.11
RPN7YPR108W PTP3P40048 928 aa8.13□□□□□ -1.11
RPN7YPR108W YIL055CP40523 627 aaKnown RBP8.13□□□□□ -1.11
RPN7YPR108W CDC25P04821 1589 aa8.13□□□□□ -1.11
RPN7YPR108W GTT3P39996 337 aa8.12□□□□□ -1.11
RPN7YPR108W CAT8P39113 1433 aa8.12□□□□□ -1.11
RPN7YPR108W MLP2P40457 1679 aa8.11□□□□□ -1.11
RPN7YPR108W VTH1P40438 1549 aa8.11□□□□□ -1.11
RPN7YPR108W VTH2P40890 1549 aa8.11□□□□□ -1.11
RPN7YPR108W TY2B-LR1P0C2J3 1770 aa8.1□□□□□ -1.11
RPN7YPR108W TY2B-FP0CX63 1770 aa8.1□□□□□ -1.11
RPN7YPR108W TY2B-GR2P0CX64 1770 aa8.1□□□□□ -1.11
RPN7YPR108W TY2B-CP25384 1770 aa8.1□□□□□ -1.11
RPN7YPR108W TY2B-DR2Q03494 1770 aa8.1□□□□□ -1.11
RPN7YPR108W TY1B-DR1Q03855 1755 aa8.1□□□□□ -1.11
RPN7YPR108W TY2B-DR3Q07791 1770 aaKnown RBP8.1□□□□□ -1.11
RPN7YPR108W TY2B-OR1Q12113 1770 aa8.1□□□□□ -1.11
RPN7YPR108W TY2B-DR1Q12472 1770 aa8.1□□□□□ -1.11
RPN7YPR108W TY2B-OR2Q12501 1770 aa8.1□□□□□ -1.11
RPN7YPR108W YAH1Q12184 172 aaKnown RBP8.1□□□□□ -1.11
RPN7YPR108W PDR15Q04182 1529 aaKnown RBP8.09□□□□□ -1.11
RPN7YPR108W RGA2Q06407 1009 aa8.09□□□□□ -1.11
RPN7YPR108W GEA2P39993 1459 aaKnown RBP8.08□□□□□ -1.12
RPN7YPR108W TY1B-DR3Q99231 1755 aa8.07□□□□□ -1.12
RPN7YPR108W SNT2P53127 1403 aa8.05□□□□□ -1.12
RPN7YPR108W TY2B-BQ12491 1770 aa8.05□□□□□ -1.12
RPN7YPR108W PAF1P38351 445 aa8.04□□□□□ -1.12
RPN7YPR108W RSM7P47150 247 aa8.02□□□□□ -1.13
RPN7YPR108W BUD21Q08492 214 aaPredicted RBP8.02□□□□□ -1.13
RPN7YPR108W CKB1P43639 278 aa8.01□□□□□ -1.13
RPN7YPR108W TY1B-HO13535 1793 aa8.01□□□□□ -1.13
RPN7YPR108W TY1B-DR5P0C2I2 1755 aa8.01□□□□□ -1.13
RPN7YPR108W TY1B-DR6P0C2I3 1755 aa8.01□□□□□ -1.13
RPN7YPR108W TY1B-LR2P0C2I5 1755 aa8.01□□□□□ -1.13
RPN7YPR108W TY1B-LR3P0C2I6 1755 aaKnown RBP8.01□□□□□ -1.13
RPN7YPR108W TY1B-PR1P0C2I9 1755 aaKnown RBP8.01□□□□□ -1.13
RPN7YPR108W TY1B-PR2P0C2J0 1756 aa8.01□□□□□ -1.13
RPN7YPR108W TY1B-PR3P0C2J1 1755 aaKnown RBP8.01□□□□□ -1.13
RPN7YPR108W TY1B-JR1P47098 1755 aa8.01□□□□□ -1.13
RPN7YPR108W TY1B-ML2Q03434 1755 aaKnown RBP8.01□□□□□ -1.13
RPN7YPR108W TY1B-ER1Q03612 1755 aa8.01□□□□□ -1.13
RPN7YPR108W TY1B-ML1Q04711 1755 aaKnown RBP8.01□□□□□ -1.13
RPN7YPR108W TY1B-GR2Q12269 1755 aa8.01□□□□□ -1.13
RPN7YPR108W TY1B-OLQ12273 1755 aa8.01□□□□□ -1.13
RPN7YPR108W TY1B-PLQ12414 1755 aaKnown RBP8.01□□□□□ -1.13
RPN7YPR108W MET5P47169 1442 aa8.01□□□□□ -1.13
RPN7YPR108W POL5P39985 1022 aaKnown RBP8□□□□□ -1.13
RPN7YPR108W NOP7P53261 605 aaKnown RBP8□□□□□ -1.13
RPN7YPR108W MMS1Q06211 1407 aa8□□□□□ -1.13
RPN7YPR108W ESC1Q03661 1658 aaKnown RBP7.99□□□□□ -1.13
RPN7YPR108W SRB8P25648 1427 aa7.99□□□□□ -1.13
RPN7YPR108W TY1B-BRQ12193 1756 aa7.99□□□□□ -1.13
RPN7YPR108W TY1B-GR3Q12316 1755 aa7.99□□□□□ -1.13
RPN7YPR108W TY1B-ORQ92393 1755 aa7.99□□□□□ -1.13
RPN7YPR108W VPS15P22219 1454 aa7.99□□□□□ -1.13
RPN7YPR108W NUP159P40477 1460 aa7.98□□□□□ -1.13
RPN7YPR108W NUP170P38181 1502 aa7.96□□□□□ -1.14
RPN7YPR108W RTG1P32607 177 aa7.95□□□□□ -1.14
RPN7YPR108W YLR271WQ06152 274 aa7.95□□□□□ -1.14
RPN7YPR108W BUD3P25558 1636 aa7.94□□□□□ -1.14
RPN7YPR108W AI2P03876 854 aa7.94□□□□□ -1.14
RPN7YPR108W URN1Q06525 465 aaKnown RBP7.94□□□□□ -1.14
RPN7YPR108W SSM4P40318 1319 aa7.94□□□□□ -1.14
RPN7YPR108W ULS1Q08562 1619 aa7.93□□□□□ -1.14
RPN7YPR108W PIB1Q06651 286 aa7.92□□□□□ -1.14
RPN7YPR108W NUP157P40064 1391 aaKnown RBP7.91□□□□□ -1.14
RPN7YPR108W NTE1Q04958 1679 aa7.91□□□□□ -1.14
RPN7YPR108W SEC3P33332 1336 aaKnown RBP7.9□□□□□ -1.14
RPN7YPR108W RPA190P10964 1664 aaKnown RBP7.89□□□□□ -1.15
RPN7YPR108W PDR12Q02785 1511 aa7.89□□□□□ -1.15
RPN7YPR108W BCK2P33306 851 aa7.89□□□□□ -1.15
RPN7YPR108W NCR1Q12200 1170 aa7.89□□□□□ -1.15
RPN7YPR108W TY1B-JR2P47100 1755 aaKnown RBP7.89□□□□□ -1.15
RPN7YPR108W TY1B-ER2Q03619 1755 aa7.89□□□□□ -1.15
RPN7YPR108W TY1B-MR1Q04214 1755 aa7.89□□□□□ -1.15
RPN7YPR108W TY1B-MR2Q04670 1755 aaKnown RBP7.89□□□□□ -1.15
RPN7YPR108W TY1B-LR1Q12088 1755 aaKnown RBP7.89□□□□□ -1.15
RPN7YPR108W TY1B-NL1Q12112 1755 aa7.89□□□□□ -1.15
RPN7YPR108W TY1B-GR1Q12141 1755 aa7.89□□□□□ -1.15
RPN7YPR108W TY1B-BLQ12490 1755 aa7.89□□□□□ -1.15
RPN7YPR108W RPO21P04050 1733 aaKnown RBP7.89□□□□□ -1.15
RPN7YPR108W BBC1P47068 1157 aa7.88□□□□□ -1.15
RPN7YPR108W DNF1P32660 1571 aa7.88□□□□□ -1.15
RPN7YPR108W SSP1P38871 571 aa7.86□□□□□ -1.15
RPN7YPR108W IRC20Q06554 1556 aa7.85□□□□□ -1.15
RPN7YPR108W LTE1P07866 1435 aa7.84□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 89 ms