RNA–Protein interactions for RNA: YPR054W

SMK1, Transcript of Middle sporulation-specific mitogen-activated protein kinase (MAPK), yeastyeast

Gene SMK1, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMK1YPR054W MIF2P35201 549 aa9.59□□□□□ -0.87
SMK1YPR054W IOC2Q12072 812 aa9.59□□□□□ -0.87
SMK1YPR054W SAM3Q08986 587 aa9.58□□□□□ -0.88
SMK1YPR054W MMS22Q06164 1454 aa9.58□□□□□ -0.88
SMK1YPR054W REV3P14284 1504 aa9.57□□□□□ -0.88
SMK1YPR054W TRP5P00931 707 aaKnown RBP9.57□□□□□ -0.88
SMK1YPR054W DMA1P38823 416 aa9.57□□□□□ -0.88
SMK1YPR054W EAP1P36041 632 aaKnown RBP9.56□□□□□ -0.88
SMK1YPR054W RQC2Q12532 1038 aaKnown RBP9.56□□□□□ -0.88
SMK1YPR054W FKH1P40466 484 aa9.55□□□□□ -0.88
SMK1YPR054W GYP5Q12344 894 aa9.55□□□□□ -0.88
SMK1YPR054W AIR2Q12476 344 aaKnown RBP9.53□□□□□ -0.88
SMK1YPR054W PEP1P32319 1579 aa9.52□□□□□ -0.89
SMK1YPR054W DCW1P36091 449 aa9.52□□□□□ -0.89
SMK1YPR054W XRN1P22147 1528 aaKnown RBP9.51□□□□□ -0.89
SMK1YPR054W COQ8P27697 501 aa9.51□□□□□ -0.89
SMK1YPR054W EDS1P38073 919 aa9.51□□□□□ -0.89
SMK1YPR054W RTG1P32607 177 aa9.49□□□□□ -0.89
SMK1YPR054W YJL171CP46992 396 aa9.47□□□□□ -0.89
SMK1YPR054W PTC3P34221 468 aaKnown RBP9.44□□□□□ -0.9
SMK1YPR054W GRE2Q12068 342 aaKnown RBP9.44□□□□□ -0.9
SMK1YPR054W BPT1P14772 1559 aa9.43□□□□□ -0.9
SMK1YPR054W HTA1P04911 132 aaKnown RBP9.43□□□□□ -0.9
SMK1YPR054W HTA2P04912 132 aa9.43□□□□□ -0.9
SMK1YPR054W SET1P38827 1080 aaKnown RBP9.42□□□□□ -0.9
SMK1YPR054W UFD4P33202 1483 aa9.41□□□□□ -0.9
SMK1YPR054W YNL035CP53962 389 aaKnown RBP9.41□□□□□ -0.9
SMK1YPR054W ABP1P15891 592 aaKnown RBP9.4□□□□□ -0.9
SMK1YPR054W ATH1P48016 1211 aa9.4□□□□□ -0.9
SMK1YPR054W ATG2P53855 1592 aa9.38□□□□□ -0.91
SMK1YPR054W NCR1Q12200 1170 aa9.38□□□□□ -0.91
SMK1YPR054W YEL023CP39992 682 aa9.37□□□□□ -0.91
SMK1YPR054W BMT6Q12291 365 aa9.36□□□□□ -0.91
SMK1YPR054W SEC61P32915 480 aa9.33□□□□□ -0.92
SMK1YPR054W GUT1P32190 709 aa9.32□□□□□ -0.92
SMK1YPR054W DAN4P47179 1161 aa9.32□□□□□ -0.92
SMK1YPR054W JIP4Q03361 876 aa9.32□□□□□ -0.92
SMK1YPR054W TFG1P41895 735 aaPredicted RBP9.31□□□□□ -0.92
SMK1YPR054W SIN3P22579 1536 aa9.31□□□□□ -0.92
SMK1YPR054W PTC4P38089 393 aa9.29□□□□□ -0.92
SMK1YPR054W TRM732Q03496 1420 aa9.26□□□□□ -0.93
SMK1YPR054W SAP30P38429 201 aa9.26□□□□□ -0.93
SMK1YPR054W YCF1P39109 1515 aaKnown RBP9.26□□□□□ -0.93
SMK1YPR054W SPP41P38904 1435 aa9.24□□□□□ -0.93
SMK1YPR054W ENP1P38333 483 aaKnown RBP9.23□□□□□ -0.93
SMK1YPR054W SOL3P38858 249 aa9.23□□□□□ -0.93
SMK1YPR054W NOP53Q12080 455 aaKnown RBP9.23□□□□□ -0.93
SMK1YPR054W SSK2P53599 1579 aa9.23□□□□□ -0.93
SMK1YPR054W TAF2P23255 1407 aa9.22□□□□□ -0.93
SMK1YPR054W PML39Q03760 334 aa9.2□□□□□ -0.94
SMK1YPR054W YDL129WQ07555 291 aa9.2□□□□□ -0.94
SMK1YPR054W IKI3Q06706 1349 aaKnown RBP9.2□□□□□ -0.94
SMK1YPR054W STU1P38198 1513 aa9.2□□□□□ -0.94
SMK1YPR054W NST1P53935 1240 aa9.19□□□□□ -0.94
SMK1YPR054W VPS70P47161 811 aa9.17□□□□□ -0.94
SMK1YPR054W MYO2P19524 1574 aaKnown RBP9.16□□□□□ -0.94
SMK1YPR054W ESP1Q03018 1630 aa9.16□□□□□ -0.94
SMK1YPR054W ILV3P39522 585 aaKnown RBP9.15□□□□□ -0.94
SMK1YPR054W YGR273CP53329 174 aa9.15□□□□□ -0.94
SMK1YPR054W MID1P41821 548 aa9.14□□□□□ -0.95
SMK1YPR054W YPR148CQ06523 435 aa9.14□□□□□ -0.95
SMK1YPR054W YTA7P40340 1379 aa9.12□□□□□ -0.95
SMK1YPR054W CAB3P36076 571 aa9.12□□□□□ -0.95
SMK1YPR054W YDR344CQ05510 147 aa9.12□□□□□ -0.95
SMK1YPR054W STH1P32597 1359 aa9.12□□□□□ -0.95
SMK1YPR054W POL1P13382 1468 aa9.11□□□□□ -0.95
SMK1YPR054W MPH3P0CE00 602 aa9.11□□□□□ -0.95
SMK1YPR054W NUP170P38181 1502 aa9.1□□□□□ -0.95
SMK1YPR054W EBP2P36049 427 aaKnown RBP9.1□□□□□ -0.95
SMK1YPR054W IFH1P39520 1085 aa9.1□□□□□ -0.95
SMK1YPR054W AI4P03878 556 aa9.09□□□□□ -0.95
SMK1YPR054W SAS10Q12136 610 aaPredicted RBP9.09□□□□□ -0.95
SMK1YPR054W MET5P47169 1442 aa9.08□□□□□ -0.96
SMK1YPR054W VHR2P40041 505 aa9.08□□□□□ -0.96
SMK1YPR054W POL5P39985 1022 aaKnown RBP9.07□□□□□ -0.96
SMK1YPR054W PEX29Q03370 554 aa9.06□□□□□ -0.96
SMK1YPR054W UBP14P38237 781 aaKnown RBP9.04□□□□□ -0.96
SMK1YPR054W LTE1P07866 1435 aa9.04□□□□□ -0.96
SMK1YPR054W SSM4P40318 1319 aa9.04□□□□□ -0.96
SMK1YPR054W SCC2Q04002 1493 aa9.03□□□□□ -0.96
SMK1YPR054W YPK9Q12697 1472 aa9.03□□□□□ -0.96
SMK1YPR054W SEC3P33332 1336 aaKnown RBP9.03□□□□□ -0.96
SMK1YPR054W KEX1P09620 729 aa9.02□□□□□ -0.97
SMK1YPR054W PRE3P38624 215 aa9.02□□□□□ -0.97
SMK1YPR054W ELP4Q02884 456 aaKnown RBP9.02□□□□□ -0.97
SMK1YPR054W YLR326WQ06170 240 aaKnown RBP9.02□□□□□ -0.97
SMK1YPR054W SPT7P35177 1332 aa9.01□□□□□ -0.97
SMK1YPR054W CHL1P22516 861 aaPredicted RBP9□□□□□ -0.97
SMK1YPR054W SLI15P38283 698 aa8.99□□□□□ -0.97
SMK1YPR054W REF2P42073 533 aaPredicted RBP8.99□□□□□ -0.97
SMK1YPR054W CDC25P04821 1589 aa8.99□□□□□ -0.97
SMK1YPR054W MYO4P32492 1471 aa8.98□□□□□ -0.97
SMK1YPR054W BNI1P41832 1953 aa8.96□□□□□ -0.98
SMK1YPR054W RPO31P04051 1460 aa8.96□□□□□ -0.98
SMK1YPR054W DNF1P32660 1571 aa8.95□□□□□ -0.98
SMK1YPR054W PCS60P38137 543 aaKnown RBP RIP-Chip data8.95□□□□□ -0.98not detected
SMK1YPR054W YDR090CQ03193 310 aa8.95□□□□□ -0.98
SMK1YPR054W MPC54Q08550 464 aa8.95□□□□□ -0.98
SMK1YPR054W RPA190P10964 1664 aaKnown RBP8.94□□□□□ -0.98
SMK1YPR054W PRS1P32895 427 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 76.3 ms