RNA–Protein interactions for RNA: YPL181W

CTI6, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene CTI6, Length 1,521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTI6YPL181W YRF1-5P0CX21 1796 aa13.85□□□□□ -0.19
CTI6YPL181W YRF1-8P0CX22 1796 aa13.85□□□□□ -0.19
CTI6YPL181W RPO21P04050 1733 aaKnown RBP13.84□□□□□ -0.19
CTI6YPL181W SNQ2P32568 1501 aaKnown RBP13.83□□□□□ -0.2
CTI6YPL181W STH1P32597 1359 aa13.81□□□□□ -0.2
CTI6YPL181W SNT2P53127 1403 aa13.79□□□□□ -0.2
CTI6YPL181W VPS15P22219 1454 aa13.76□□□□□ -0.21
CTI6YPL181W SAS10Q12136 610 aaPredicted RBP13.75□□□□□ -0.21
CTI6YPL181W GEA2P39993 1459 aaKnown RBP13.75□□□□□ -0.21
CTI6YPL181W BNI1P41832 1953 aa13.69□□□□□ -0.22
CTI6YPL181W MLP2P40457 1679 aa13.69□□□□□ -0.22
CTI6YPL181W ULS1Q08562 1619 aa13.67□□□□□ -0.22
CTI6YPL181W RTT106P40161 455 aa13.66□□□□□ -0.22
CTI6YPL181W ITT1Q04638 464 aa13.66□□□□□ -0.22
CTI6YPL181W PDR15Q04182 1529 aaKnown RBP13.66□□□□□ -0.22
CTI6YPL181W MET10P39692 1035 aa13.65□□□□□ -0.22
CTI6YPL181W TAF7Q05021 590 aa13.62□□□□□ -0.23
CTI6YPL181W DRS2P39524 1355 aa13.59□□□□□ -0.23
CTI6YPL181W SPO14P36126 1683 aa13.59□□□□□ -0.23
CTI6YPL181W PDR12Q02785 1511 aa13.58□□□□□ -0.24
CTI6YPL181W IRC20Q06554 1556 aa13.54□□□□□ -0.24
CTI6YPL181W IFH1P39520 1085 aa13.52□□□□□ -0.25
CTI6YPL181W NUP170P38181 1502 aa13.5□□□□□ -0.25
CTI6YPL181W GDB1Q06625 1536 aa13.5□□□□□ -0.25
CTI6YPL181W MMS1Q06211 1407 aa13.49□□□□□ -0.25
CTI6YPL181W NUP157P40064 1391 aaKnown RBP13.47□□□□□ -0.25
CTI6YPL181W GEA1P47102 1408 aaPredicted RBP13.47□□□□□ -0.25
CTI6YPL181W PDR10P51533 1564 aa13.42□□□□□ -0.26
CTI6YPL181W IQG1Q12280 1495 aa13.42□□□□□ -0.26
CTI6YPL181W TY3B-GQ99315 1547 aa13.39□□□□□ -0.27
CTI6YPL181W CAT8P39113 1433 aa13.37□□□□□ -0.27
CTI6YPL181W BUD3P25558 1636 aa13.34□□□□□ -0.27
CTI6YPL181W YBT1P32386 1661 aa13.34□□□□□ -0.27
CTI6YPL181W DOP1Q03921 1698 aa13.32□□□□□ -0.28
CTI6YPL181W TRM3Q07527 1436 aa13.32□□□□□ -0.28
CTI6YPL181W ABP1P15891 592 aaKnown RBP13.31□□□□□ -0.28
CTI6YPL181W DNF2Q12675 1612 aa13.29□□□□□ -0.28
CTI6YPL181W ARO1P08566 1588 aaKnown RBP13.26□□□□□ -0.29
CTI6YPL181W MIF2P35201 549 aa13.24□□□□□ -0.29
CTI6YPL181W CKB1P43639 278 aa13.23□□□□□ -0.29
CTI6YPL181W YSP2Q06681 1438 aa13.2□□□□□ -0.3
CTI6YPL181W SEC7P11075 2009 aaKnown RBP13.19□□□□□ -0.3
CTI6YPL181W CHC1P22137 1653 aaKnown RBP13.17□□□□□ -0.3
CTI6YPL181W BNR1P40450 1375 aa13.12□□□□□ -0.31
CTI6YPL181W SRB8P25648 1427 aa13.11□□□□□ -0.31
CTI6YPL181W IKI3Q06706 1349 aaKnown RBP13.07□□□□□ -0.32
CTI6YPL181W YOR093CQ12275 1648 aa13.03□□□□□ -0.32
CTI6YPL181W BUD21Q08492 214 aaPredicted RBP12.97□□□□□ -0.33
CTI6YPL181W YAP3P38749 330 aa12.94□□□□□ -0.34
CTI6YPL181W SSM4P40318 1319 aa12.94□□□□□ -0.34
CTI6YPL181W DNF3Q12674 1656 aa12.9□□□□□ -0.34
CTI6YPL181W URN1Q06525 465 aaKnown RBP12.87□□□□□ -0.35
CTI6YPL181W YFR006WP43590 535 aa12.85□□□□□ -0.35
CTI6YPL181W BFR2Q06631 534 aaKnown RBP12.82□□□□□ -0.36
CTI6YPL181W TFA1P36100 482 aa12.81□□□□□ -0.36
CTI6YPL181W NUP188P52593 1655 aaKnown RBP12.8□□□□□ -0.36
CTI6YPL181W IPL1P38991 367 aa12.79□□□□□ -0.36
CTI6YPL181W VMR1P38735 1592 aa12.78□□□□□ -0.36
CTI6YPL181W MAK10Q02197 733 aa12.75□□□□□ -0.37
CTI6YPL181W TYS1P36421 394 aaKnown RBP12.74□□□□□ -0.37
CTI6YPL181W GCN2P15442 1659 aa12.72□□□□□ -0.37
CTI6YPL181W IML1P47170 1584 aa12.7□□□□□ -0.38
CTI6YPL181W PDR5P33302 1511 aaKnown RBP12.69□□□□□ -0.38
CTI6YPL181W HAP1P0CE41 1502 aa12.68□□□□□ -0.38
CTI6YPL181W PDR11P40550 1411 aa12.64□□□□□ -0.39
CTI6YPL181W USO1P25386 1790 aa12.59□□□□□ -0.39
CTI6YPL181W PAF1P38351 445 aa12.52□□□□□ -0.41
CTI6YPL181W RAV1P47104 1357 aa12.51□□□□□ -0.41
CTI6YPL181W TY1B-NL2Q99337 1749 aaKnown RBP12.5□□□□□ -0.41
CTI6YPL181W YMR196WQ04336 1088 aa12.46□□□□□ -0.42
CTI6YPL181W RTC1Q08281 1341 aa12.44□□□□□ -0.42
CTI6YPL181W THI12P42883 340 aa12.43□□□□□ -0.42
CTI6YPL181W THI5P43534 340 aa12.43□□□□□ -0.42
CTI6YPL181W THI11P47183 340 aa12.43□□□□□ -0.42
CTI6YPL181W NOP7P53261 605 aaKnown RBP12.43□□□□□ -0.42
CTI6YPL181W THI13Q07748 340 aa12.43□□□□□ -0.42
CTI6YPL181W KRE5P22023 1365 aa12.41□□□□□ -0.42
CTI6YPL181W BCK1Q01389 1478 aa12.39□□□□□ -0.43
CTI6YPL181W NUP192P47054 1683 aa12.38□□□□□ -0.43
CTI6YPL181W MRX12P47084 519 aa12.37□□□□□ -0.43
CTI6YPL181W CFT1Q06632 1357 aaKnown RBP12.37□□□□□ -0.43
CTI6YPL181W RIA1P53893 1110 aa12.37□□□□□ -0.43
CTI6YPL181W RAD9P14737 1309 aa12.34□□□□□ -0.43
CTI6YPL181W ALD4P46367 519 aaKnown RBP12.34□□□□□ -0.43
CTI6YPL181W CAB1Q04430 367 aa12.33□□□□□ -0.44
CTI6YPL181W YNR029CP53729 429 aaKnown RBP12.29□□□□□ -0.44
CTI6YPL181W ESL2P36168 1195 aa12.25□□□□□ -0.45
CTI6YPL181W TAF5P38129 798 aa12.25□□□□□ -0.45
CTI6YPL181W TAF8Q03750 510 aa12.2□□□□□ -0.46
CTI6YPL181W TY3B-IQ7LHG5 1498 aaKnown RBP12.16□□□□□ -0.46
CTI6YPL181W NAP1P25293 417 aaKnown RBP12.16□□□□□ -0.46
CTI6YPL181W PTP3P40048 928 aa12.12□□□□□ -0.47
CTI6YPL181W KIP3P53086 805 aaKnown RBP12.11□□□□□ -0.47
CTI6YPL181W RCM1P53972 490 aa12.09□□□□□ -0.47
CTI6YPL181W SPE2P21182 396 aa12.08□□□□□ -0.48
CTI6YPL181W CPS1P27614 576 aa12.08□□□□□ -0.48
CTI6YPL181W ORC1P54784 914 aaPredicted RBP12.06□□□□□ -0.48
CTI6YPL181W YAH1Q12184 172 aaKnown RBP12.06□□□□□ -0.48
CTI6YPL181W PPH3P32345 308 aa12.05□□□□□ -0.48
CTI6YPL181W APP1P53933 587 aa12.02□□□□□ -0.48
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms