RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C SAS10Q12136 610 aaPredicted RBP9.06□□□□□ -0.96
UBC11YOR339C YRF1-1P0CX20 1796 aa9.06□□□□□ -0.96
UBC11YOR339C YRF1-5P0CX21 1796 aa9.06□□□□□ -0.96
UBC11YOR339C YRF1-8P0CX22 1796 aa9.06□□□□□ -0.96
UBC11YOR339C NUP159P40477 1460 aa9.04□□□□□ -0.96
UBC11YOR339C STH1P32597 1359 aa9.03□□□□□ -0.96
UBC11YOR339C ULS1Q08562 1619 aa9.02□□□□□ -0.96
UBC11YOR339C SNT2P53127 1403 aa9.01□□□□□ -0.97
UBC11YOR339C PDR15Q04182 1529 aaKnown RBP9□□□□□ -0.97
UBC11YOR339C TAF7Q05021 590 aa8.95□□□□□ -0.98
UBC11YOR339C LTE1P07866 1435 aa8.93□□□□□ -0.98
UBC11YOR339C VPS15P22219 1454 aa8.93□□□□□ -0.98
UBC11YOR339C RTT106P40161 455 aa8.92□□□□□ -0.98
UBC11YOR339C GEA2P39993 1459 aaKnown RBP8.91□□□□□ -0.98
UBC11YOR339C SPO14P36126 1683 aa8.91□□□□□ -0.98
UBC11YOR339C IFH1P39520 1085 aa8.9□□□□□ -0.98
UBC11YOR339C IRC20Q06554 1556 aa8.9□□□□□ -0.99
UBC11YOR339C MET10P39692 1035 aa8.87□□□□□ -0.99
UBC11YOR339C GEA1P47102 1408 aaPredicted RBP8.87□□□□□ -0.99
UBC11YOR339C PDR12Q02785 1511 aa8.86□□□□□ -0.99
UBC11YOR339C BNI1P41832 1953 aa8.85□□□□□ -0.99
UBC11YOR339C GDB1Q06625 1536 aa8.84□□□□□ -0.99
UBC11YOR339C TY3B-GQ99315 1547 aa8.84□□□□□ -0.99
UBC11YOR339C YBT1P32386 1661 aa8.83□□□□□ -1
UBC11YOR339C NUP170P38181 1502 aa8.8□□□□□ -1
UBC11YOR339C NUP157P40064 1391 aaKnown RBP8.79□□□□□ -1
UBC11YOR339C FAP1P53971 965 aa8.79□□□□□ -1
UBC11YOR339C ITT1Q04638 464 aa8.79□□□□□ -1
UBC11YOR339C PDR10P51533 1564 aa8.78□□□□□ -1
UBC11YOR339C DRS2P39524 1355 aa8.77□□□□□ -1.01
UBC11YOR339C CAT8P39113 1433 aa8.76□□□□□ -1.01
UBC11YOR339C IQG1Q12280 1495 aa8.74□□□□□ -1.01
UBC11YOR339C ARO1P08566 1588 aaKnown RBP8.72□□□□□ -1.01
UBC11YOR339C BUD3P25558 1636 aa8.72□□□□□ -1.01
UBC11YOR339C DOP1Q03921 1698 aa8.71□□□□□ -1.02
UBC11YOR339C MMS1Q06211 1407 aa8.69□□□□□ -1.02
UBC11YOR339C CKB1P43639 278 aa8.67□□□□□ -1.02
UBC11YOR339C IKI3Q06706 1349 aaKnown RBP8.66□□□□□ -1.02
UBC11YOR339C TRM3Q07527 1436 aa8.64□□□□□ -1.03
UBC11YOR339C YSP2Q06681 1438 aa8.63□□□□□ -1.03
UBC11YOR339C CHC1P22137 1653 aaKnown RBP8.63□□□□□ -1.03
UBC11YOR339C SEC7P11075 2009 aaKnown RBP8.63□□□□□ -1.03
UBC11YOR339C DNF2Q12675 1612 aa8.62□□□□□ -1.03
UBC11YOR339C SRB8P25648 1427 aa8.61□□□□□ -1.03
UBC11YOR339C SSM4P40318 1319 aa8.58□□□□□ -1.04
UBC11YOR339C BNR1P40450 1375 aa8.58□□□□□ -1.04
UBC11YOR339C ABP1P15891 592 aaKnown RBP8.53□□□□□ -1.04
UBC11YOR339C BUD21Q08492 214 aaPredicted RBP8.51□□□□□ -1.05
UBC11YOR339C YOR093CQ12275 1648 aa8.5□□□□□ -1.05
UBC11YOR339C DIP2Q12220 943 aaPredicted RBP8.45□□□□□ -1.06
UBC11YOR339C GCN2P15442 1659 aa8.45□□□□□ -1.06
UBC11YOR339C NUP188P52593 1655 aaKnown RBP8.43□□□□□ -1.06
UBC11YOR339C VMR1P38735 1592 aa8.41□□□□□ -1.06
UBC11YOR339C DNF3Q12674 1656 aa8.4□□□□□ -1.06
UBC11YOR339C MIF2P35201 549 aa8.39□□□□□ -1.07
UBC11YOR339C YAP3P38749 330 aa8.38□□□□□ -1.07
UBC11YOR339C PDR5P33302 1511 aaKnown RBP8.36□□□□□ -1.07
UBC11YOR339C PRI1P10363 409 aa8.36□□□□□ -1.07
UBC11YOR339C URN1Q06525 465 aaKnown RBP8.36□□□□□ -1.07
UBC11YOR339C IML1P47170 1584 aa8.35□□□□□ -1.07
UBC11YOR339C IPL1P38991 367 aa8.32□□□□□ -1.08
UBC11YOR339C TYS1P36421 394 aaKnown RBP8.31□□□□□ -1.08
UBC11YOR339C ISW2Q08773 1120 aa8.31□□□□□ -1.08
UBC11YOR339C PDR11P40550 1411 aa8.3□□□□□ -1.08
UBC11YOR339C AAD16Q02895 342 aa8.27□□□□□ -1.09
UBC11YOR339C BFR2Q06631 534 aaKnown RBP8.26□□□□□ -1.09
UBC11YOR339C HAP1P0CE41 1502 aa8.25□□□□□ -1.09
UBC11YOR339C PRY3P47033 881 aa8.25□□□□□ -1.09
UBC11YOR339C MAK10Q02197 733 aa8.25□□□□□ -1.09
UBC11YOR339C USO1P25386 1790 aa8.25□□□□□ -1.09
UBC11YOR339C RPG1P38249 964 aaKnown RBP8.24□□□□□ -1.09
UBC11YOR339C PAF1P38351 445 aa8.24□□□□□ -1.09
UBC11YOR339C RAV1P47104 1357 aa8.22□□□□□ -1.09
UBC11YOR339C NOP7P53261 605 aaKnown RBP8.22□□□□□ -1.09
UBC11YOR339C AVT3P36062 692 aa8.21□□□□□ -1.1
UBC11YOR339C NUP192P47054 1683 aa8.19□□□□□ -1.1
UBC11YOR339C RTC1Q08281 1341 aa8.18□□□□□ -1.1
UBC11YOR339C YFR006WP43590 535 aa8.16□□□□□ -1.1
UBC11YOR339C TY1B-NL2Q99337 1749 aaKnown RBP8.15□□□□□ -1.11
UBC11YOR339C BCK1Q01389 1478 aa8.12□□□□□ -1.11
UBC11YOR339C KRE5P22023 1365 aa8.1□□□□□ -1.11
UBC11YOR339C RAD9P14737 1309 aa8.1□□□□□ -1.11
UBC11YOR339C TAF5P38129 798 aa8.09□□□□□ -1.11
UBC11YOR339C ALD4P46367 519 aaKnown RBP8.09□□□□□ -1.11
UBC11YOR339C MRX12P47084 519 aa8.08□□□□□ -1.12
UBC11YOR339C RIA1P53893 1110 aa8.08□□□□□ -1.12
UBC11YOR339C CAB1Q04430 367 aa8.08□□□□□ -1.12
UBC11YOR339C CFT1Q06632 1357 aaKnown RBP8.07□□□□□ -1.12
UBC11YOR339C ESL2P36168 1195 aa8.06□□□□□ -1.12
UBC11YOR339C YMR196WQ04336 1088 aa8.05□□□□□ -1.12
UBC11YOR339C THI12P42883 340 aa8.04□□□□□ -1.12
UBC11YOR339C THI5P43534 340 aa8.04□□□□□ -1.12
UBC11YOR339C THI11P47183 340 aa8.04□□□□□ -1.12
UBC11YOR339C THI13Q07748 340 aa8.04□□□□□ -1.12
UBC11YOR339C TY3B-IQ7LHG5 1498 aaKnown RBP8.02□□□□□ -1.13
UBC11YOR339C ORC1P54784 914 aaPredicted RBP8.02□□□□□ -1.13
UBC11YOR339C TAF8Q03750 510 aa8.01□□□□□ -1.13
UBC11YOR339C YNR029CP53729 429 aaKnown RBP8□□□□□ -1.13
UBC11YOR339C KIP3P53086 805 aaKnown RBP7.99□□□□□ -1.13
UBC11YOR339C NAP1P25293 417 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms