RNA–Protein interactions for RNA: YOR006C

TSR3, Transcript of Protein required for 20S pre-rRNA processing, yeastyeast

Gene TSR3, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR3YOR006C WSC3Q12215 556 aa10.65□□□□□ -0.7
TSR3YOR006C YBL029C-AQ3E756 94 aa10.65□□□□□ -0.7
TSR3YOR006C SIN3P22579 1536 aa10.64□□□□□ -0.71
TSR3YOR006C MSB4Q12317 492 aa10.64□□□□□ -0.71
TSR3YOR006C PTC3P34221 468 aaKnown RBP10.63□□□□□ -0.71
TSR3YOR006C SKI3P17883 1432 aaKnown RBP10.62□□□□□ -0.71
TSR3YOR006C VNX1P42839 908 aa10.61□□□□□ -0.71
TSR3YOR006C YOL036WQ08206 761 aa10.61□□□□□ -0.71
TSR3YOR006C ABP1P15891 592 aaKnown RBP10.59□□□□□ -0.71
TSR3YOR006C GRE2Q12068 342 aaKnown RBP10.59□□□□□ -0.71
TSR3YOR006C GYP5Q12344 894 aa10.59□□□□□ -0.71
TSR3YOR006C SAS10Q12136 610 aaPredicted RBP10.58□□□□□ -0.72
TSR3YOR006C SET4P42948 560 aa10.57□□□□□ -0.72
TSR3YOR006C SSK2P53599 1579 aa10.56□□□□□ -0.72
TSR3YOR006C EAP1P36041 632 aaKnown RBP10.56□□□□□ -0.72
TSR3YOR006C ATH1P48016 1211 aa10.56□□□□□ -0.72
TSR3YOR006C YPR148CQ06523 435 aa10.55□□□□□ -0.72
TSR3YOR006C SPP1Q03012 353 aa10.54□□□□□ -0.72
TSR3YOR006C GUT1P32190 709 aa10.53□□□□□ -0.72
TSR3YOR006C TIF11P38912 153 aaKnown RBP10.53□□□□□ -0.72
TSR3YOR006C BPT1P14772 1559 aa10.52□□□□□ -0.72
TSR3YOR006C ESP1Q03018 1630 aa10.5□□□□□ -0.73
TSR3YOR006C HTA1P04911 132 aaKnown RBP10.47□□□□□ -0.73
TSR3YOR006C HTA2P04912 132 aa10.47□□□□□ -0.73
TSR3YOR006C DCW1P36091 449 aa10.47□□□□□ -0.73
TSR3YOR006C ULI1P43604 169 aa10.47□□□□□ -0.73
TSR3YOR006C VPS70P47161 811 aa10.47□□□□□ -0.73
TSR3YOR006C CKB1P43639 278 aa10.44□□□□□ -0.74
TSR3YOR006C MYO2P19524 1574 aaKnown RBP10.43□□□□□ -0.74
TSR3YOR006C TRP5P00931 707 aaKnown RBP10.42□□□□□ -0.74
TSR3YOR006C UFD4P33202 1483 aa10.39□□□□□ -0.75
TSR3YOR006C YPK9Q12697 1472 aa10.39□□□□□ -0.75
TSR3YOR006C IOC2Q12072 812 aa10.38□□□□□ -0.75
TSR3YOR006C JIP4Q03361 876 aa10.36□□□□□ -0.75
TSR3YOR006C YCF1P39109 1515 aaKnown RBP10.35□□□□□ -0.75
TSR3YOR006C YEL023CP39992 682 aa10.35□□□□□ -0.75
TSR3YOR006C SCC2Q04002 1493 aa10.35□□□□□ -0.75
TSR3YOR006C YGR273CP53329 174 aa10.34□□□□□ -0.75
TSR3YOR006C REF2P42073 533 aaPredicted RBP10.33□□□□□ -0.76
TSR3YOR006C LDB19Q12502 818 aa10.33□□□□□ -0.76
TSR3YOR006C PTC4P38089 393 aa10.32□□□□□ -0.76
TSR3YOR006C SOL3P38858 249 aa10.31□□□□□ -0.76
TSR3YOR006C YNL035CP53962 389 aaKnown RBP10.31□□□□□ -0.76
TSR3YOR006C RPO31P04051 1460 aa10.29□□□□□ -0.76
TSR3YOR006C SIS1P25294 352 aaKnown RBP10.28□□□□□ -0.76
TSR3YOR006C AI4P03878 556 aa10.27□□□□□ -0.77
TSR3YOR006C NST1P53935 1240 aa10.27□□□□□ -0.77
TSR3YOR006C RTG1P32607 177 aa10.26□□□□□ -0.77
TSR3YOR006C MPH3P0CE00 602 aa10.25□□□□□ -0.77
TSR3YOR006C SEC61P32915 480 aa10.25□□□□□ -0.77
TSR3YOR006C MAK21Q12176 1025 aaKnown RBP10.25□□□□□ -0.77
TSR3YOR006C SPB4P25808 606 aaPredicted RBP10.24□□□□□ -0.77
TSR3YOR006C VHR2P40041 505 aa10.24□□□□□ -0.77
TSR3YOR006C PBS2P08018 668 aa10.23□□□□□ -0.77
TSR3YOR006C UBP14P38237 781 aaKnown RBP10.23□□□□□ -0.77
TSR3YOR006C DAN4P47179 1161 aa10.23□□□□□ -0.77
TSR3YOR006C YLR326WQ06170 240 aaKnown RBP10.22□□□□□ -0.77
TSR3YOR006C KEX1P09620 729 aa10.21□□□□□ -0.77
TSR3YOR006C FKH1P40466 484 aa10.21□□□□□ -0.77
TSR3YOR006C TFG1P41895 735 aaPredicted RBP10.2□□□□□ -0.78
TSR3YOR006C NCR1Q12200 1170 aa10.19□□□□□ -0.78
TSR3YOR006C CHD1P32657 1468 aa10.18□□□□□ -0.78
TSR3YOR006C CDC25P04821 1589 aa10.18□□□□□ -0.78
TSR3YOR006C TOP2P06786 1428 aaKnown RBP10.17□□□□□ -0.78
TSR3YOR006C COX6P00427 148 aa10.17□□□□□ -0.78
TSR3YOR006C RAD54P32863 898 aa10.17□□□□□ -0.78
TSR3YOR006C DSF2P38213 736 aa10.17□□□□□ -0.78
TSR3YOR006C KIC1P38692 1080 aa10.17□□□□□ -0.78
TSR3YOR006C YDR090CQ03193 310 aa10.15□□□□□ -0.78
TSR3YOR006C TY2B-LR1P0C2J3 1770 aa10.15□□□□□ -0.78
TSR3YOR006C TY2B-FP0CX63 1770 aa10.15□□□□□ -0.78
TSR3YOR006C TY2B-GR2P0CX64 1770 aa10.15□□□□□ -0.78
TSR3YOR006C TY2B-CP25384 1770 aa10.15□□□□□ -0.78
TSR3YOR006C TY2B-DR2Q03494 1770 aa10.15□□□□□ -0.78
TSR3YOR006C TY1B-DR1Q03855 1755 aa10.15□□□□□ -0.78
TSR3YOR006C TY2B-DR3Q07791 1770 aaKnown RBP10.15□□□□□ -0.78
TSR3YOR006C TY2B-OR1Q12113 1770 aa10.15□□□□□ -0.78
TSR3YOR006C TY2B-DR1Q12472 1770 aa10.15□□□□□ -0.78
TSR3YOR006C TY2B-OR2Q12501 1770 aa10.15□□□□□ -0.78
TSR3YOR006C POL1P13382 1468 aa10.14□□□□□ -0.79
TSR3YOR006C RKR1Q04781 1562 aa10.14□□□□□ -0.79
TSR3YOR006C ILV3P39522 585 aaKnown RBP10.13□□□□□ -0.79
TSR3YOR006C AIR2Q12476 344 aaKnown RBP10.13□□□□□ -0.79
TSR3YOR006C LEU3P08638 886 aa10.12□□□□□ -0.79
TSR3YOR006C MAM3Q12296 706 aa10.12□□□□□ -0.79
TSR3YOR006C PCS60P38137 543 aaKnown RBP RIP-Chip data10.11□□□□□ -0.79 RIP-Chip
TSR3YOR006C PAN1P32521 1480 aa10.1□□□□□ -0.79
TSR3YOR006C PML39Q03760 334 aa10.1□□□□□ -0.79
TSR3YOR006C YDL129WQ07555 291 aa10.1□□□□□ -0.79
TSR3YOR006C ESC1Q03661 1658 aaKnown RBP10.09□□□□□ -0.79
TSR3YOR006C STU1P38198 1513 aa10.07□□□□□ -0.8
TSR3YOR006C SLI15P38283 698 aa10.07□□□□□ -0.8
TSR3YOR006C YJL171CP46992 396 aa10.07□□□□□ -0.8
TSR3YOR006C TY1B-BRQ12193 1756 aa10.06□□□□□ -0.8
TSR3YOR006C TY1B-GR3Q12316 1755 aa10.06□□□□□ -0.8
TSR3YOR006C TY1B-ORQ92393 1755 aa10.06□□□□□ -0.8
TSR3YOR006C DNF1P32660 1571 aa10.06□□□□□ -0.8
TSR3YOR006C RPP1BP10622 106 aaKnown RBP10.06□□□□□ -0.8
TSR3YOR006C MET5P47169 1442 aa10.06□□□□□ -0.8
TSR3YOR006C MMS22Q06164 1454 aa10.05□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms