RNA–Protein interactions for RNA: YOR003W

YSP3, Transcript of Putative precursor to the subtilisin-like protease III, yeastyeast

Gene YSP3, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSP3YOR003W YRF1-8P0CX22 1796 aa16.93■□□□□ 0.3
YSP3YOR003W LTE1P07866 1435 aa16.9■□□□□ 0.3
YSP3YOR003W RPO21P04050 1733 aaKnown RBP16.9■□□□□ 0.3
YSP3YOR003W SNQ2P32568 1501 aaKnown RBP16.83■□□□□ 0.28
YSP3YOR003W VPS15P22219 1454 aa16.78■□□□□ 0.28
YSP3YOR003W GEA2P39993 1459 aaKnown RBP16.78■□□□□ 0.28
YSP3YOR003W STH1P32597 1359 aa16.75■□□□□ 0.27
YSP3YOR003W SAS10Q12136 610 aaPredicted RBP16.75■□□□□ 0.27
YSP3YOR003W SNT2P53127 1403 aa16.73■□□□□ 0.27
YSP3YOR003W BNI1P41832 1953 aa16.73■□□□□ 0.27
YSP3YOR003W MLP2P40457 1679 aa16.71■□□□□ 0.27
YSP3YOR003W ITT1Q04638 464 aa16.68■□□□□ 0.26
YSP3YOR003W ULS1Q08562 1619 aa16.67■□□□□ 0.26
YSP3YOR003W RTT106P40161 455 aa16.63■□□□□ 0.25
YSP3YOR003W PDR15Q04182 1529 aaKnown RBP16.63■□□□□ 0.25
YSP3YOR003W SPO14P36126 1683 aa16.59■□□□□ 0.25
YSP3YOR003W MET10P39692 1035 aa16.58■□□□□ 0.24
YSP3YOR003W DRS2P39524 1355 aa16.57■□□□□ 0.24
YSP3YOR003W IFH1P39520 1085 aa16.5■□□□□ 0.23
YSP3YOR003W NUP170P38181 1502 aa16.49■□□□□ 0.23
YSP3YOR003W MMS1Q06211 1407 aa16.49■□□□□ 0.23
YSP3YOR003W PDR12Q02785 1511 aa16.49■□□□□ 0.23
YSP3YOR003W TAF7Q05021 590 aa16.48■□□□□ 0.23
YSP3YOR003W IRC20Q06554 1556 aa16.47■□□□□ 0.23
YSP3YOR003W GDB1Q06625 1536 aa16.44■□□□□ 0.22
YSP3YOR003W NUP157P40064 1391 aaKnown RBP16.41■□□□□ 0.22
YSP3YOR003W GEA1P47102 1408 aaPredicted RBP16.35■□□□□ 0.21
YSP3YOR003W IQG1Q12280 1495 aa16.33■□□□□ 0.21
YSP3YOR003W PDR10P51533 1564 aa16.32■□□□□ 0.2
YSP3YOR003W DOP1Q03921 1698 aa16.31■□□□□ 0.2
YSP3YOR003W ABP1P15891 592 aaKnown RBP16.3■□□□□ 0.2
YSP3YOR003W TY3B-GQ99315 1547 aa16.29■□□□□ 0.2
YSP3YOR003W YBT1P32386 1661 aa16.26■□□□□ 0.19
YSP3YOR003W DNF2Q12675 1612 aa16.26■□□□□ 0.19
YSP3YOR003W MIF2P35201 549 aa16.22■□□□□ 0.19
YSP3YOR003W CAT8P39113 1433 aa16.2■□□□□ 0.18
YSP3YOR003W BUD3P25558 1636 aa16.2■□□□□ 0.18
YSP3YOR003W TRM3Q07527 1436 aa16.19■□□□□ 0.18
YSP3YOR003W ARO1P08566 1588 aaKnown RBP16.14■□□□□ 0.17
YSP3YOR003W CKB1P43639 278 aa16.12■□□□□ 0.17
YSP3YOR003W CHC1P22137 1653 aaKnown RBP16.09■□□□□ 0.17
YSP3YOR003W BFR2Q06631 534 aaKnown RBP16.04■□□□□ 0.16
YSP3YOR003W YSP2Q06681 1438 aa16.03■□□□□ 0.16
YSP3YOR003W SEC7P11075 2009 aaKnown RBP16■□□□□ 0.15
YSP3YOR003W BNR1P40450 1375 aa15.96■□□□□ 0.15
YSP3YOR003W YOR093CQ12275 1648 aa15.92■□□□□ 0.14
YSP3YOR003W SRB8P25648 1427 aa15.89■□□□□ 0.13
YSP3YOR003W IKI3Q06706 1349 aaKnown RBP15.79■□□□□ 0.12
YSP3YOR003W DNF3Q12674 1656 aa15.77■□□□□ 0.11
YSP3YOR003W BUD21Q08492 214 aaPredicted RBP15.77■□□□□ 0.11
YSP3YOR003W YFR006WP43590 535 aa15.76■□□□□ 0.11
YSP3YOR003W YAP3P38749 330 aa15.73■□□□□ 0.11
YSP3YOR003W SSM4P40318 1319 aa15.7■□□□□ 0.1
YSP3YOR003W DIP2Q12220 943 aaPredicted RBP15.65■□□□□ 0.1
YSP3YOR003W URN1Q06525 465 aaKnown RBP15.62■□□□□ 0.09
YSP3YOR003W NUP188P52593 1655 aaKnown RBP15.61■□□□□ 0.09
YSP3YOR003W VMR1P38735 1592 aa15.57■□□□□ 0.08
YSP3YOR003W IPL1P38991 367 aa15.53■□□□□ 0.08
YSP3YOR003W MAK10Q02197 733 aa15.53■□□□□ 0.08
YSP3YOR003W TYS1P36421 394 aaKnown RBP15.52■□□□□ 0.08
YSP3YOR003W IML1P47170 1584 aa15.49■□□□□ 0.07
YSP3YOR003W PDR5P33302 1511 aaKnown RBP15.46■□□□□ 0.07
YSP3YOR003W GCN2P15442 1659 aa15.46■□□□□ 0.07
YSP3YOR003W USO1P25386 1790 aa15.46■□□□□ 0.06
YSP3YOR003W AVT3P36062 692 aa15.37■□□□□ 0.05
YSP3YOR003W PDR11P40550 1411 aa15.37■□□□□ 0.05
YSP3YOR003W HAP1P0CE41 1502 aa15.34■□□□□ 0.05
YSP3YOR003W TY1B-NL2Q99337 1749 aaKnown RBP15.22■□□□□ 0.03
YSP3YOR003W PAF1P38351 445 aa15.2■□□□□ 0.02
YSP3YOR003W THI12P42883 340 aa15.17■□□□□ 0.02
YSP3YOR003W THI5P43534 340 aa15.17■□□□□ 0.02
YSP3YOR003W THI11P47183 340 aa15.17■□□□□ 0.02
YSP3YOR003W THI13Q07748 340 aa15.17■□□□□ 0.02
YSP3YOR003W RAV1P47104 1357 aa15.15■□□□□ 0.02
YSP3YOR003W YMR196WQ04336 1088 aa15.14■□□□□ 0.01
YSP3YOR003W KRE5P22023 1365 aa15.13■□□□□ 0.01
YSP3YOR003W TFA1P36100 482 aa15.1■□□□□ 0.01
YSP3YOR003W NOP7P53261 605 aaKnown RBP15.09■□□□□ 0.01
YSP3YOR003W MRX12P47084 519 aa15.09■□□□□ 0.01
YSP3YOR003W RIA1P53893 1110 aa15.09■□□□□ 0.01
YSP3YOR003W NUP192P47054 1683 aa15.08■□□□□ 0
YSP3YOR003W RTC1Q08281 1341 aa15.06■□□□□ 0
YSP3YOR003W BCK1Q01389 1478 aa15.05■□□□□ -0
YSP3YOR003W RAD9P14737 1309 aa15.02■□□□□ -0
YSP3YOR003W CAB1Q04430 367 aa15.02■□□□□ -0
YSP3YOR003W CFT1Q06632 1357 aaKnown RBP15.02□□□□□ -0.01
YSP3YOR003W ALD4P46367 519 aaKnown RBP14.98□□□□□ -0.01
YSP3YOR003W YNR029CP53729 429 aaKnown RBP14.96□□□□□ -0.01
YSP3YOR003W TAF5P38129 798 aa14.92□□□□□ -0.02
YSP3YOR003W FAP1P53971 965 aa14.86□□□□□ -0.03
YSP3YOR003W ESL2P36168 1195 aa14.84□□□□□ -0.03
YSP3YOR003W TY3B-IQ7LHG5 1498 aaKnown RBP14.84□□□□□ -0.03
YSP3YOR003W TAF8Q03750 510 aa14.83□□□□□ -0.03
YSP3YOR003W ISW2Q08773 1120 aa14.8□□□□□ -0.04
YSP3YOR003W NAP1P25293 417 aaKnown RBP14.76□□□□□ -0.05
YSP3YOR003W PTP3P40048 928 aa14.75□□□□□ -0.05
YSP3YOR003W ORC1P54784 914 aaPredicted RBP14.74□□□□□ -0.05
YSP3YOR003W RCM1P53972 490 aa14.73□□□□□ -0.05
YSP3YOR003W KIP3P53086 805 aaKnown RBP14.7□□□□□ -0.06
YSP3YOR003W APP1P53933 587 aa14.7□□□□□ -0.06
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms