RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W VTH2P40890 1549 aa17.88■□□□□ 0.45
PRE6YOL038W GEA2P39993 1459 aaKnown RBP17.87■□□□□ 0.45
PRE6YOL038W TSC11P40061 1430 aa17.83■□□□□ 0.45
PRE6YOL038W VPS15P22219 1454 aa17.78■□□□□ 0.44
PRE6YOL038W ITT1Q04638 464 aa17.78■□□□□ 0.44
PRE6YOL038W MYO4P32492 1471 aa17.68■□□□□ 0.42
PRE6YOL038W SNQ2P32568 1501 aaKnown RBP17.67■□□□□ 0.42
PRE6YOL038W MIF2P35201 549 aa17.61■□□□□ 0.41
PRE6YOL038W MMS1Q06211 1407 aa17.59■□□□□ 0.41
PRE6YOL038W DRS2P39524 1355 aa17.55■□□□□ 0.4
PRE6YOL038W SNT2P53127 1403 aa17.54■□□□□ 0.4
PRE6YOL038W IRC20Q06554 1556 aa17.53■□□□□ 0.4
PRE6YOL038W SPO14P36126 1683 aa17.53■□□□□ 0.4
PRE6YOL038W YTA7P40340 1379 aa17.52■□□□□ 0.39
PRE6YOL038W DNF2Q12675 1612 aa17.47■□□□□ 0.39
PRE6YOL038W NUP170P38181 1502 aa17.45■□□□□ 0.38
PRE6YOL038W ULS1Q08562 1619 aa17.43■□□□□ 0.38
PRE6YOL038W MLP2P40457 1679 aa17.42■□□□□ 0.38
PRE6YOL038W ABP1P15891 592 aaKnown RBP17.39■□□□□ 0.37
PRE6YOL038W DOP1Q03921 1698 aa17.39■□□□□ 0.37
PRE6YOL038W PDR12Q02785 1511 aa17.37■□□□□ 0.37
PRE6YOL038W STH1P32597 1359 aa17.32■□□□□ 0.36
PRE6YOL038W GDB1Q06625 1536 aa17.31■□□□□ 0.36
PRE6YOL038W MET10P39692 1035 aa17.28■□□□□ 0.36
PRE6YOL038W PDR15Q04182 1529 aaKnown RBP17.26■□□□□ 0.35
PRE6YOL038W IQG1Q12280 1495 aa17.17■□□□□ 0.34
PRE6YOL038W NUP157P40064 1391 aaKnown RBP17.15■□□□□ 0.34
PRE6YOL038W RTT106P40161 455 aa17.14■□□□□ 0.33
PRE6YOL038W PDR10P51533 1564 aa17.12■□□□□ 0.33
PRE6YOL038W YFR006WP43590 535 aa17.09■□□□□ 0.33
PRE6YOL038W TRM3Q07527 1436 aa17.07■□□□□ 0.32
PRE6YOL038W ARO1P08566 1588 aaKnown RBP17.06■□□□□ 0.32
PRE6YOL038W CHC1P22137 1653 aaKnown RBP17.05■□□□□ 0.32
PRE6YOL038W SAS10Q12136 610 aaPredicted RBP17.01■□□□□ 0.31
PRE6YOL038W YBT1P32386 1661 aa17.01■□□□□ 0.31
PRE6YOL038W BUD3P25558 1636 aa17■□□□□ 0.31
PRE6YOL038W YOR093CQ12275 1648 aa16.99■□□□□ 0.31
PRE6YOL038W TY3B-GQ99315 1547 aa16.98■□□□□ 0.31
PRE6YOL038W SEC7P11075 2009 aaKnown RBP16.91■□□□□ 0.3
PRE6YOL038W IFH1P39520 1085 aa16.85■□□□□ 0.29
PRE6YOL038W GEA1P47102 1408 aaPredicted RBP16.85■□□□□ 0.29
PRE6YOL038W DNF3Q12674 1656 aa16.81■□□□□ 0.28
PRE6YOL038W CAT8P39113 1433 aa16.79■□□□□ 0.28
PRE6YOL038W TAF7Q05021 590 aa16.75■□□□□ 0.27
PRE6YOL038W YSP2Q06681 1438 aa16.73■□□□□ 0.27
PRE6YOL038W CKB1P43639 278 aa16.58■□□□□ 0.24
PRE6YOL038W BNR1P40450 1375 aa16.56■□□□□ 0.24
PRE6YOL038W USO1P25386 1790 aa16.52■□□□□ 0.24
PRE6YOL038W YAP3P38749 330 aa16.48■□□□□ 0.23
PRE6YOL038W SRB8P25648 1427 aa16.37■□□□□ 0.21
PRE6YOL038W NUP188P52593 1655 aaKnown RBP16.35■□□□□ 0.21
PRE6YOL038W IML1P47170 1584 aa16.34■□□□□ 0.21
PRE6YOL038W MAK10Q02197 733 aa16.33■□□□□ 0.2
PRE6YOL038W VMR1P38735 1592 aa16.32■□□□□ 0.2
PRE6YOL038W HAP1P0CE41 1502 aa16.18■□□□□ 0.18
PRE6YOL038W URN1Q06525 465 aaKnown RBP16.16■□□□□ 0.18
PRE6YOL038W TYS1P36421 394 aaKnown RBP16.15■□□□□ 0.18
PRE6YOL038W IPL1P38991 367 aa16.15■□□□□ 0.18
PRE6YOL038W BUD21Q08492 214 aaPredicted RBP16.12■□□□□ 0.17
PRE6YOL038W TY1B-NL2Q99337 1749 aaKnown RBP16.11■□□□□ 0.17
PRE6YOL038W PDR5P33302 1511 aaKnown RBP16.09■□□□□ 0.17
PRE6YOL038W PDR11P40550 1411 aa15.97■□□□□ 0.15
PRE6YOL038W THI12P42883 340 aa15.97■□□□□ 0.15
PRE6YOL038W THI5P43534 340 aa15.97■□□□□ 0.15
PRE6YOL038W THI11P47183 340 aa15.97■□□□□ 0.15
PRE6YOL038W THI13Q07748 340 aa15.97■□□□□ 0.15
PRE6YOL038W SSM4P40318 1319 aa15.96■□□□□ 0.15
PRE6YOL038W IKI3Q06706 1349 aaKnown RBP15.94■□□□□ 0.14
PRE6YOL038W GCN2P15442 1659 aa15.92■□□□□ 0.14
PRE6YOL038W YMR196WQ04336 1088 aa15.88■□□□□ 0.13
PRE6YOL038W KRE5P22023 1365 aa15.75■□□□□ 0.11
PRE6YOL038W CFT1Q06632 1357 aaKnown RBP15.71■□□□□ 0.11
PRE6YOL038W NUP192P47054 1683 aa15.7■□□□□ 0.1
PRE6YOL038W BCK1Q01389 1478 aa15.65■□□□□ 0.1
PRE6YOL038W RIA1P53893 1110 aa15.62■□□□□ 0.09
PRE6YOL038W RAV1P47104 1357 aa15.58■□□□□ 0.08
PRE6YOL038W YNR029CP53729 429 aaKnown RBP15.56■□□□□ 0.08
PRE6YOL038W PTP3P40048 928 aa15.54■□□□□ 0.08
PRE6YOL038W YAH1Q12184 172 aaKnown RBP15.54■□□□□ 0.08
PRE6YOL038W APP1P53933 587 aa15.53■□□□□ 0.08
PRE6YOL038W MRX12P47084 519 aa15.52■□□□□ 0.08
PRE6YOL038W RAD9P14737 1309 aa15.51■□□□□ 0.07
PRE6YOL038W TY3B-IQ7LHG5 1498 aaKnown RBP15.5■□□□□ 0.07
PRE6YOL038W CAB1Q04430 367 aa15.49■□□□□ 0.07
PRE6YOL038W GLN1P32288 370 aaKnown RBP15.45■□□□□ 0.06
PRE6YOL038W RTC1Q08281 1341 aa15.43■□□□□ 0.06
PRE6YOL038W ALD4P46367 519 aaKnown RBP15.39■□□□□ 0.05
PRE6YOL038W RRP5Q05022 1729 aaKnown RBP15.39■□□□□ 0.05
PRE6YOL038W YIL055CP40523 627 aaKnown RBP15.38■□□□□ 0.05
PRE6YOL038W REB1P21538 810 aa15.36■□□□□ 0.05
PRE6YOL038W YRF1-2P40105 1681 aa15.35■□□□□ 0.05
PRE6YOL038W PAF1P38351 445 aa15.35■□□□□ 0.05
PRE6YOL038W BFR2Q06631 534 aaKnown RBP15.35■□□□□ 0.05
PRE6YOL038W TY4B-HP0C2J7 1802 aa15.35■□□□□ 0.05
PRE6YOL038W TY4B-JP47024 1803 aa15.35■□□□□ 0.05
PRE6YOL038W ENT1Q12518 454 aa15.26■□□□□ 0.03
PRE6YOL038W ENV9Q08651 330 aa15.21■□□□□ 0.03
PRE6YOL038W NOP7P53261 605 aaKnown RBP15.19■□□□□ 0.02
PRE6YOL038W TAF8Q03750 510 aa15.15■□□□□ 0.02
PRE6YOL038W RCM1P53972 490 aa15.14■□□□□ 0.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms